12 Publikationen

Alle markieren

[12]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
Brandt, David, Simunovic, Marina, Busche, Tobias, Haak, Markus, Belmann, Peter, Jünemann, Sebastian, Schulz, Tizian, Klages, Levin Joe, Vinke, Svenja, Beckstette, Michael, Pohl, Ehmke, Scherer, Christiane, Sczyrba, Alexander, and Kalinowski, Jörn. “Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines”. Viruses 13.9 (2021): 1870.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600
Schaffert, Lena, Ruwe, Matthias, Milse, Johanna, Hanuschka, Katharina, Ortseifen, Vera, Droste, Julian, Brandt, David, Schlüter, Laura, Kutter, Yvonne, Vinke, Svenja, Viehöfer, Prisca, Jacob, Lucas, Lübke, Nils-Christian, Schulte-Berndt, Eva, Hain, Carsten, Linder, Marten, Schmidt, Pascal, Wollenschläger, Lars, Luttermann, Tobias, Thieme, Eric, Hassa, Julia, Haak, Markus, Wittchen, Manuel, Mentz, Almut, Persicke, Marcus, Busche, Tobias, and Rückert, Christian. “Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov.”. International Journal of Systematic and Evolutionary Microbiology 71.8 (2021).
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[10]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
Aevarsson, Arnthor, Kaczorowska, Anna-Karina, Adalsteinsson, Bjorn Thor, Ahlqvist, Josefin, Al-Karadaghi, Salam, Altenbuchner, Joseph, Arsin, Hasan, Atlasson, Ulfur August, Brandt, David, Cichowicz-Cieslak, Magdalena, Cornish, Katy A S, Courtin, Jeremy, Dabrowski, Slawomir, Dahle, Hakon, Djeffane, Samia, Dorawa, Sebastian, Dusaucy, Julia, Enault, Francois, Fedoy, Anita-Elin, Freitag-Pohl, Stefanie, Fridjonsson, Olafur H, Galiez, Clovis, Glomsaker, Eirin, Guerin, Mickael, Gundeso, Sigurd E, Gudmundsdottir, Elisabet E, Gudmundsson, Hordur, Hakansson, Maria, Henke, Christian, Helleux, Alexandra, Henriksen, Jorn Remi, Hjorleifdottir, Sigridur, Hreggvidsson, Gudmundur O, Jasilionis, Andrius, Jochheim, Annika, Jonsdottir, Ilmur, Jonsdottir, Lilja Bjork, Jurczak-Kurek, Agata, Kaczorowski, Tadeusz, Kalinowski, Jörn, Kozlowski, Lukasz P, Krupovic, Mart, Kwiatkowska-Semrau, Karolina, Lanes, Olav, Lange, Joanna, Lebrat, Julien, Linares-Pasten, Javier, Liu, Ying, Lorentsen, Steffen A, Luttermann, Tobias, Mas, Thibaud, Merre, William, Mirdita, Milot, Morzywolek, Agnieszka, Ndela, Eric Olo, Karlsson, Eva Nordberg, Olgudottir, Edda, Pedersen, Cathrine, Perler, Francine, Petursdottir, Solveig K, Plotka, Magdalena, Pohl, Ehmke, Prangishvili, David, Ray, Jessica L, Reynisson, Birkir, Robertsdottir, Tara, Sandaa, Ruth-Anne, Sczyrba, Alexander, Skirnisdottir, Sigurlaug, Soding, Johannes, Solstad, Terese, Steen, Ida H, Stefansson, Sigmar Karl, Steinegger, Martin, Overa, Katrine Stange, Striberny, Bernd, Svensson, Anders, Szadkowska, Monika, Tarrant, Emma J, Terzian, Paul, Tourigny, Mathilde, van den Bergh, Tom, Vanhalst, Justine, Vincent, Jonathan, Vroling, Bas, Walse, Bjorn, Wang, Lei, Watzlawick, Hildegard, Welin, Martin, Werbowy, Olesia, Wons, Ewa, and Zhang, Ruoshi. “Going to extremes - a metagenomic journey into the dark matter of life”. FEMS microbiology letters (2021): fnab067.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159
Medvedeva, Sofia, Brandt, David, Cvirkaite-Krupovic, Virginija, Liu, Ying, Severinov, Konstantin, Ishino, Sonoko, Ishino, Yoshizumi, Prangishvili, David, Kalinowski, Jörn, and Krupovic, Mart. “New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae”. Environmental microbiology (Accepted).
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919
Schmitz, Lisa Marie, Hageneier, Felix, Rosenthal, Katrin, Busche, Tobias, Brandt, David, Kalinowski, Jörn, and Lutz, Stephan. “Recombinant expression and characterization of novel P450s from Actinosynnema mirum”. Bioorganic & medicinal chemistry 42 (2021): 116241.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141
Blanc-Mathieu, Romain, Dahle, Hakon, Hofgaard, Antje, Brandt, David, Ban, Hiroki, Kalinowski, Jörn, Ogata, Hiroyuki, and Sandaa, Ruth-Anne. “A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism.”. Journal of virology (2021).
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260 OA
Radukic, Marco, Brandt, David, Haak, Markus, Müller, Kristian, and Kalinowski, Jörn. “Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol”. NAR Genomics and Bioinformatics 2.4 (2020): lqaa074.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299 OA
Kreienbaum, Maximilian, Dörrich, Anja K., Brandt, David, Schmid, Nicole E., Leonhard, Tabea, Hager, Fabian, Brenzinger, Susanne, Hahn, Julia, Glatter, Timo, Ruwe, Matthias, Briegel, Ariane, Kalinowski, Jörn, and Thormann, Kai M. “Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation”. Frontiers in Microbiology 11 (2020): 573260.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812
Radukic, Marco, Brandt, David, Haak, Markus, Kalinowski, Jörn, and Müller, Kristian. “Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids”. MOLECULAR THERAPY. Cambridge: Cell Press, 2020.Vol. 28. 398-399.
PUB | WoS
 
[3]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413 OA
Schaffert, Lena, Schneiker-Bekel, Susanne, Dymek, Saskia, Droste, Julian, Persicke, Marcus, Busche, Tobias, Brandt, David, Pühler, Alfred, and Kalinowski, Jörn. “Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110”. Frontiers in Microbiology 10 (2019): 2448.
PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
 
[2]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439 OA
Schaffert, Lena, März, Camilla, Burkhardt, Lisa, Droste, Julian, Brandt, David, Busche, Tobias, Rosen, Winfried, Schneiker-Bekel, Susanne, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. “Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110”. Microbial Cell Factories 18.1 (2019): 114.
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[1]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511
Liu, Ying, Brandt, David, Ishino, Sonoko, Ishino, Yoshizumi, Koonin, Eugene V., Kalinowski, Jörn, Krupovic, Mart, and Prangishvili, David. “New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures”. Environmental Microbiology 21.6 (2018): 2002-2014.
PUB | DOI | WoS | PubMed | Europe PMC
 

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12 Publikationen

Alle markieren

[12]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
Brandt, David, Simunovic, Marina, Busche, Tobias, Haak, Markus, Belmann, Peter, Jünemann, Sebastian, Schulz, Tizian, Klages, Levin Joe, Vinke, Svenja, Beckstette, Michael, Pohl, Ehmke, Scherer, Christiane, Sczyrba, Alexander, and Kalinowski, Jörn. “Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines”. Viruses 13.9 (2021): 1870.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600
Schaffert, Lena, Ruwe, Matthias, Milse, Johanna, Hanuschka, Katharina, Ortseifen, Vera, Droste, Julian, Brandt, David, Schlüter, Laura, Kutter, Yvonne, Vinke, Svenja, Viehöfer, Prisca, Jacob, Lucas, Lübke, Nils-Christian, Schulte-Berndt, Eva, Hain, Carsten, Linder, Marten, Schmidt, Pascal, Wollenschläger, Lars, Luttermann, Tobias, Thieme, Eric, Hassa, Julia, Haak, Markus, Wittchen, Manuel, Mentz, Almut, Persicke, Marcus, Busche, Tobias, and Rückert, Christian. “Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov.”. International Journal of Systematic and Evolutionary Microbiology 71.8 (2021).
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[10]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
Aevarsson, Arnthor, Kaczorowska, Anna-Karina, Adalsteinsson, Bjorn Thor, Ahlqvist, Josefin, Al-Karadaghi, Salam, Altenbuchner, Joseph, Arsin, Hasan, Atlasson, Ulfur August, Brandt, David, Cichowicz-Cieslak, Magdalena, Cornish, Katy A S, Courtin, Jeremy, Dabrowski, Slawomir, Dahle, Hakon, Djeffane, Samia, Dorawa, Sebastian, Dusaucy, Julia, Enault, Francois, Fedoy, Anita-Elin, Freitag-Pohl, Stefanie, Fridjonsson, Olafur H, Galiez, Clovis, Glomsaker, Eirin, Guerin, Mickael, Gundeso, Sigurd E, Gudmundsdottir, Elisabet E, Gudmundsson, Hordur, Hakansson, Maria, Henke, Christian, Helleux, Alexandra, Henriksen, Jorn Remi, Hjorleifdottir, Sigridur, Hreggvidsson, Gudmundur O, Jasilionis, Andrius, Jochheim, Annika, Jonsdottir, Ilmur, Jonsdottir, Lilja Bjork, Jurczak-Kurek, Agata, Kaczorowski, Tadeusz, Kalinowski, Jörn, Kozlowski, Lukasz P, Krupovic, Mart, Kwiatkowska-Semrau, Karolina, Lanes, Olav, Lange, Joanna, Lebrat, Julien, Linares-Pasten, Javier, Liu, Ying, Lorentsen, Steffen A, Luttermann, Tobias, Mas, Thibaud, Merre, William, Mirdita, Milot, Morzywolek, Agnieszka, Ndela, Eric Olo, Karlsson, Eva Nordberg, Olgudottir, Edda, Pedersen, Cathrine, Perler, Francine, Petursdottir, Solveig K, Plotka, Magdalena, Pohl, Ehmke, Prangishvili, David, Ray, Jessica L, Reynisson, Birkir, Robertsdottir, Tara, Sandaa, Ruth-Anne, Sczyrba, Alexander, Skirnisdottir, Sigurlaug, Soding, Johannes, Solstad, Terese, Steen, Ida H, Stefansson, Sigmar Karl, Steinegger, Martin, Overa, Katrine Stange, Striberny, Bernd, Svensson, Anders, Szadkowska, Monika, Tarrant, Emma J, Terzian, Paul, Tourigny, Mathilde, van den Bergh, Tom, Vanhalst, Justine, Vincent, Jonathan, Vroling, Bas, Walse, Bjorn, Wang, Lei, Watzlawick, Hildegard, Welin, Martin, Werbowy, Olesia, Wons, Ewa, and Zhang, Ruoshi. “Going to extremes - a metagenomic journey into the dark matter of life”. FEMS microbiology letters (2021): fnab067.
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159
Medvedeva, Sofia, Brandt, David, Cvirkaite-Krupovic, Virginija, Liu, Ying, Severinov, Konstantin, Ishino, Sonoko, Ishino, Yoshizumi, Prangishvili, David, Kalinowski, Jörn, and Krupovic, Mart. “New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae”. Environmental microbiology (Accepted).
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919
Schmitz, Lisa Marie, Hageneier, Felix, Rosenthal, Katrin, Busche, Tobias, Brandt, David, Kalinowski, Jörn, and Lutz, Stephan. “Recombinant expression and characterization of novel P450s from Actinosynnema mirum”. Bioorganic & medicinal chemistry 42 (2021): 116241.
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141
Blanc-Mathieu, Romain, Dahle, Hakon, Hofgaard, Antje, Brandt, David, Ban, Hiroki, Kalinowski, Jörn, Ogata, Hiroyuki, and Sandaa, Ruth-Anne. “A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism.”. Journal of virology (2021).
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260 OA
Radukic, Marco, Brandt, David, Haak, Markus, Müller, Kristian, and Kalinowski, Jörn. “Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol”. NAR Genomics and Bioinformatics 2.4 (2020): lqaa074.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299 OA
Kreienbaum, Maximilian, Dörrich, Anja K., Brandt, David, Schmid, Nicole E., Leonhard, Tabea, Hager, Fabian, Brenzinger, Susanne, Hahn, Julia, Glatter, Timo, Ruwe, Matthias, Briegel, Ariane, Kalinowski, Jörn, and Thormann, Kai M. “Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation”. Frontiers in Microbiology 11 (2020): 573260.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812
Radukic, Marco, Brandt, David, Haak, Markus, Kalinowski, Jörn, and Müller, Kristian. “Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids”. MOLECULAR THERAPY. Cambridge: Cell Press, 2020.Vol. 28. 398-399.
PUB | WoS
 
[3]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413 OA
Schaffert, Lena, Schneiker-Bekel, Susanne, Dymek, Saskia, Droste, Julian, Persicke, Marcus, Busche, Tobias, Brandt, David, Pühler, Alfred, and Kalinowski, Jörn. “Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110”. Frontiers in Microbiology 10 (2019): 2448.
PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
 
[2]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439 OA
Schaffert, Lena, März, Camilla, Burkhardt, Lisa, Droste, Julian, Brandt, David, Busche, Tobias, Rosen, Winfried, Schneiker-Bekel, Susanne, Persicke, Marcus, Pühler, Alfred, and Kalinowski, Jörn. “Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110”. Microbial Cell Factories 18.1 (2019): 114.
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[1]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511
Liu, Ying, Brandt, David, Ishino, Sonoko, Ishino, Yoshizumi, Koonin, Eugene V., Kalinowski, Jörn, Krupovic, Mart, and Prangishvili, David. “New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures”. Environmental Microbiology 21.6 (2018): 2002-2014.
PUB | DOI | WoS | PubMed | Europe PMC
 

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