PUB - Publikationen an der Universität Bielefeld

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• [17]
  

  2024 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2988649

  Schmid, N.; Brandt, D.; Walasek, C.; Rolland, C.; Wittmann, J.; Fischer, D.; Müsken, M.; Kalinowski, J.; Thormann, K. (2024): An autonomous plasmid as an inovirus phage satellite Applied and Environmental Microbiology ,e0024624

  PUB | DOI | PubMed | Europe PMC
   
• [16]
  

  2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979424

  Schmidt, P.; Brandt, D.; Busche, T.; Kalinowski, J. (2023): Characterization of Bacterial Transcriptional Regulatory Networks in Escherichia coli through Genome-Wide In Vitro Run-Off Transcription/RNA-seq (ROSE) Microorganisms,11:(6):1388

  PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
   
• [15]
  

  2023 | Bielefelder E-Dissertation | PUB-ID: 2981158

  Brandt, D. (2023): Advanced genome and epigenome analyses of viruses from different domains of life. Bielefeld: Universität Bielefeld.

  PUB | PDF
   
• [14]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967684

  Behle, A.; Dietsch, M.; Goldschmidt, L.; Murugathas, W.; Berwanger, L. C.; Burmester, J.; Yao, L.; Brandt, D.; Busche, T.; Kalinowski, J.; Hudson, E. P.; Ebenhöh, O.; Axmann, I. M.; Machné, R. (2022): Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in Nucleic Acids Research,gkac1132

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• [13]
  

  2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966624

  Hertel, O.; Neuss, A.; Busche, T.; Brandt, D.; Kalinowski, J.; Bahnemann, J.; Noll, T. (2022): Enhancing stability of recombinant CHO cells by CRISPR/Cas9-mediated site-specific integration into regions with distinct histone modifications Frontiers in Bioengineering and Biotechnology,10

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• [12]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501

  Brandt, D.; Simunovic, M.; Busche, T.; Haak, M.; Belmann, P.; Jünemann, S.; Schulz, T.; Klages, L. J.; Vinke, S.; Beckstette, M.; Pohl, E.; Scherer, C.; Sczyrba, A.; Kalinowski, J. (2021): Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines Viruses,13:(9):1870

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• [11]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600

  Schaffert, L.; Ruwe, M.; Milse, J.; Hanuschka, K.; Ortseifen, V.; Droste, J.; Brandt, D.; Schlüter, L.; Kutter, Y.; Vinke, S.; Viehöfer, P.; Jacob, L.; Lübke, N. - C.; Schulte-Berndt, E.; Hain, C.; Linder, M.; Schmidt, P.; Wollenschläger, L.; Luttermann, T.; Thieme, E.; Hassa, J.; Haak, M.; Wittchen, M.; Mentz, A.; Persicke, M.; Busche, T.; Rückert, C. (2021): Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov. International Journal of Systematic and Evolutionary Microbiology,71:(8)

  PUB | DOI | WoS | PubMed | Europe PMC | GenBank
   
• [10]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512

  Aevarsson, A.; Kaczorowska, A. - K.; Adalsteinsson, B. T.; Ahlqvist, J.; Al-Karadaghi, S.; Altenbuchner, J.; Arsin, H.; Atlasson, U. A.; Brandt, D.; Cichowicz-Cieslak, M.; Cornish, K. A. S.; Courtin, J.; Dabrowski, S.; Dahle, H.; Djeffane, S.; Dorawa, S.; Dusaucy, J.; Enault, F.; Fedoy, A. - E.; Freitag-Pohl, S.; Fridjonsson, O. H.; Galiez, C.; Glomsaker, E.; Guerin, M.; Gundeso, S. E.; Gudmundsdottir, E. E.; Gudmundsson, H.; Hakansson, M.; Henke, C.; Helleux, A.; Henriksen, J. R.; Hjorleifdottir, S.; Hreggvidsson, G. O.; Jasilionis, A.; Jochheim, A.; Jonsdottir, I.; Jonsdottir, L. B.; Jurczak-Kurek, A.; Kaczorowski, T.; Kalinowski, J.; Kozlowski, L. P.; Krupovic, M.; Kwiatkowska-Semrau, K.; Lanes, O.; Lange, J.; Lebrat, J.; Linares-Pasten, J.; Liu, Y.; Lorentsen, S. A.; Luttermann, T.; Mas, T.; Merre, W.; Mirdita, M.; Morzywolek, A.; Ndela, E. O.; Karlsson, E. N.; Olgudottir, E.; Pedersen, C.; Perler, F.; Petursdottir, S. K.; Plotka, M.; Pohl, E.; Prangishvili, D.; Ray, J. L.; Reynisson, B.; Robertsdottir, T.; Sandaa, R. - A.; Sczyrba, A.; Skirnisdottir, S.; Soding, J.; Solstad, T.; Steen, I. H.; Stefansson, S. K.; Steinegger, M.; Overa, K. S.; Striberny, B.; Svensson, A.; Szadkowska, M.; Tarrant, E. J.; Terzian, P.; Tourigny, M.; van den Bergh, T.; Vanhalst, J.; Vincent, J.; Vroling, B.; Walse, B.; Wang, L.; Watzlawick, H.; Welin, M.; Werbowy, O.; Wons, E.; Zhang, R. (2021): Going to extremes - a metagenomic journey into the dark matter of life FEMS microbiology letters,fnab067

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• [9]
  

  2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159

  Medvedeva, S.; Brandt, D.; Cvirkaite-Krupovic, V.; Liu, Y.; Severinov, K.; Ishino, S.; Ishino, Y.; Prangishvili, D.; Kalinowski, J.; Krupovic, M. (Accepted): New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae Environmental microbiology

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [8]
  

  2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919

  Schmitz, L. M.; Hageneier, F.; Rosenthal, K.; Busche, T.; Brandt, D.; Kalinowski, J.; Lutz, S. (2021): Recombinant expression and characterization of novel P450s from Actinosynnema mirum Bioorganic & medicinal chemistry,42:116241

  PUB | DOI | WoS | PubMed | Europe PMC
   
• [7]
  

  2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141

  Blanc-Mathieu, R.; Dahle, H.; Hofgaard, A.; Brandt, D.; Ban, H.; Kalinowski, J.; Ogata, H.; Sandaa, R. - A. (2021): A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism. Journal of virology

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• [6]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260

  Radukic, M.; Brandt, D.; Haak, M.; Müller, K.; Kalinowski, J. (2020): Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol NAR Genomics and Bioinformatics,2:(4):lqaa074

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• [5]
  

  2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299

  Kreienbaum, M.; Dörrich, A. K.; Brandt, D.; Schmid, N. E.; Leonhard, T.; Hager, F.; Brenzinger, S.; Hahn, J.; Glatter, T.; Ruwe, M.; Briegel, A.; Kalinowski, J.; Thormann, K. M. (2020): Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation Frontiers in Microbiology,11:573260

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• [4]
  

  2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812

  Radukic, M.; Brandt, D.; Haak, M.; Kalinowski, J.; Müller, K. (2020): Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids. In: MOLECULAR THERAPY. Cambridge: Cell Press. (28). S. 398-399.

  PUB | WoS
   
• [3]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413

  Schaffert, L.; Schneiker-Bekel, S.; Dymek, S.; Droste, J.; Persicke, M.; Busche, T.; Brandt, D.; Pühler, A.; Kalinowski, J. (2019): Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110 Frontiers in Microbiology,10:2448

  PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
   
• [2]
  

  2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439

  Schaffert, L.; März, C.; Burkhardt, L.; Droste, J.; Brandt, D.; Busche, T.; Rosen, W.; Schneiker-Bekel, S.; Persicke, M.; Pühler, A.; Kalinowski, J. (2019): Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110 Microbial Cell Factories,18:(1):114

  PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
   
• [1]
  

  2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511

  Liu, Y.; Brandt, D.; Ishino, S.; Ishino, Y.; Koonin, E. V.; Kalinowski, J.; Krupovic, M.; Prangishvili, D. (2018): New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures Environmental Microbiology,21:(6): 2002-2014.

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