16 Publikationen

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  • [16]
    2023 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2979424 OA
    Schmidt, P., Brandt, D., Busche, T., & Kalinowski, J. (2023). Characterization of Bacterial Transcriptional Regulatory Networks in Escherichia coli through Genome-Wide In Vitro Run-Off Transcription/RNA-seq (ROSE). Microorganisms, 11(6), 1388. https://doi.org/10.3390/microorganisms11061388
    PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
     
  • [15]
    2023 | Bielefelder E-Dissertation | PUB-ID: 2981158 OA
    Brandt, D. (2023). Advanced genome and epigenome analyses of viruses from different domains of life. Bielefeld: Universität Bielefeld.
    PUB | PDF
     
  • [14]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2967684 OA
    Behle, A., Dietsch, M., Goldschmidt, L., Murugathas, W., Berwanger, L. C., Burmester, J., Yao, L., et al. (2022). Manipulation of topoisomerase expression inhibits cell division but not growth and reveals a distinctive promoter structure in . Nucleic Acids Research, gkac1132. https://doi.org/10.1093/nar/gkac1132
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [13]
    2022 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2966624 OA
    Hertel, O., Neuss, A., Busche, T., Brandt, D., Kalinowski, J., Bahnemann, J., & Noll, T. (2022). Enhancing stability of recombinant CHO cells by CRISPR/Cas9-mediated site-specific integration into regions with distinct histone modifications. Frontiers in Bioengineering and Biotechnology, 10. https://doi.org/10.3389/fbioe.2022.1010719
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [12]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
    Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., et al. (2021). Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses, 13(9), 1870. https://doi.org/10.3390/v13091870
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [11]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600
    Schaffert, L., Ruwe, M., Milse, J., Hanuschka, K., Ortseifen, V., Droste, J., Brandt, D., et al. (2021). Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov. International Journal of Systematic and Evolutionary Microbiology, 71(8). https://doi.org/10.1099/ijsem.0.004933
    PUB | DOI | WoS | PubMed | Europe PMC | GenBank
     
  • [10]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
    Aevarsson, A., Kaczorowska, A. - K., Adalsteinsson, B. T., Ahlqvist, J., Al-Karadaghi, S., Altenbuchner, J., Arsin, H., et al. (2021). Going to extremes - a metagenomic journey into the dark matter of life. FEMS microbiology letters, fnab067. https://doi.org/10.1093/femsle/fnab067
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [9]
    2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159
    Medvedeva, S., Brandt, D., Cvirkaite-Krupovic, V., Liu, Y., Severinov, K., Ishino, S., Ishino, Y., et al. (Accepted). New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Environmental microbiology. https://doi.org/10.1111/1462-2920.15654
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [8]
    2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919
    Schmitz, L. M., Hageneier, F., Rosenthal, K., Busche, T., Brandt, D., Kalinowski, J., & Lutz, S. (2021). Recombinant expression and characterization of novel P450s from Actinosynnema mirum. Bioorganic & medicinal chemistry, 42, 116241. https://doi.org/10.1016/j.bmc.2021.116241
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [7]
    2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141
    Blanc-Mathieu, R., Dahle, H., Hofgaard, A., Brandt, D., Ban, H., Kalinowski, J., Ogata, H., et al. (2021). A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism. Journal of virology. https://doi.org/10.1128/JVI.02446-20
    PUB | DOI | WoS | PubMed | Europe PMC
     
  • [6]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260 OA
    Radukic, M., Brandt, D., Haak, M., Müller, K., & Kalinowski, J. (2020). Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol. NAR Genomics and Bioinformatics, 2(4), lqaa074. https://doi.org/10.1093/nargab/lqaa074
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [5]
    2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299 OA
    Kreienbaum, M., Dörrich, A. K., Brandt, D., Schmid, N. E., Leonhard, T., Hager, F., Brenzinger, S., et al. (2020). Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation. Frontiers in Microbiology, 11, 573260. doi:10.3389/fmicb.2020.573260
    PUB | PDF | DOI | WoS | PubMed | Europe PMC
     
  • [4]
    2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812
    Radukic, M., Brandt, D., Haak, M., Kalinowski, J., & Müller, K. (2020). Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids. MOLECULAR THERAPY, 28, 398-399. Cambridge: Cell Press.
    PUB | WoS
     
  • [3]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413 OA
    Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., et al. (2019). Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology, 10, 2448. doi:10.3389/fmicb.2019.02448
    PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
     
  • [2]
    2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439 OA
    Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18(1), 114. doi:10.1186/s12934-019-1162-5
    PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
     
  • [1]
    2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511
    Liu, Y., Brandt, D., Ishino, S., Ishino, Y., Koonin, E. V., Kalinowski, J., Krupovic, M., et al. (2018). New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures. Environmental Microbiology, 21(6), 2002-2014. doi:10.1111/1462-2920.14479
    PUB | DOI | WoS | PubMed | Europe PMC
     

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