David Brandt

dbrandt@cebitec.uni-bielefeld.de
ORCID logo https://orcid.org/0000-0002-8859-8646

PEVZ-ID
92144125

12 Publikationen

Alle markieren

[12]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., et al. (2021). Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses, 13(9), 1870. https://doi.org/10.3390/v13091870
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600
Schaffert, L., Ruwe, M., Milse, J., Hanuschka, K., Ortseifen, V., Droste, J., Brandt, D., et al. (2021). Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov. International Journal of Systematic and Evolutionary Microbiology, 71(8). https://doi.org/10.1099/ijsem.0.004933
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[10]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
Aevarsson, A., Kaczorowska, A. - K., Adalsteinsson, B. T., Ahlqvist, J., Al-Karadaghi, S., Altenbuchner, J., Arsin, H., et al. (2021). Going to extremes - a metagenomic journey into the dark matter of life. FEMS microbiology letters, fnab067. https://doi.org/10.1093/femsle/fnab067
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159
Medvedeva, S., Brandt, D., Cvirkaite-Krupovic, V., Liu, Y., Severinov, K., Ishino, S., Ishino, Y., et al. (Accepted). New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Environmental microbiology. https://doi.org/10.1111/1462-2920.15654
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919
Schmitz, L. M., Hageneier, F., Rosenthal, K., Busche, T., Brandt, D., Kalinowski, J., & Lutz, S. (2021). Recombinant expression and characterization of novel P450s from Actinosynnema mirum. Bioorganic & medicinal chemistry, 42, 116241. https://doi.org/10.1016/j.bmc.2021.116241
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141
Blanc-Mathieu, R., Dahle, H., Hofgaard, A., Brandt, D., Ban, H., Kalinowski, J., Ogata, H., et al. (2021). A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism. Journal of virology. https://doi.org/10.1128/JVI.02446-20
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260 OA
Radukic, M., Brandt, D., Haak, M., Müller, K., & Kalinowski, J. (2020). Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol. NAR Genomics and Bioinformatics, 2(4), lqaa074. https://doi.org/10.1093/nargab/lqaa074
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299 OA
Kreienbaum, M., Dörrich, A. K., Brandt, D., Schmid, N. E., Leonhard, T., Hager, F., Brenzinger, S., et al. (2020). Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation. Frontiers in Microbiology, 11, 573260. doi:10.3389/fmicb.2020.573260
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812
Radukic, M., Brandt, D., Haak, M., Kalinowski, J., & Müller, K. (2020). Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids. MOLECULAR THERAPY, 28, 398-399. Cambridge: Cell Press.
PUB | WoS
 
[3]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413 OA
Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., et al. (2019). Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology, 10, 2448. doi:10.3389/fmicb.2019.02448
PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
 
[2]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439 OA
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18(1), 114. doi:10.1186/s12934-019-1162-5
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[1]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511
Liu, Y., Brandt, D., Ishino, S., Ishino, Y., Koonin, E. V., Kalinowski, J., Krupovic, M., et al. (2018). New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures. Environmental Microbiology, 21(6), 2002-2014. doi:10.1111/1462-2920.14479
PUB | DOI | WoS | PubMed | Europe PMC
 
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12 Publikationen

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[12]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2957501 OA
Brandt, D., Simunovic, M., Busche, T., Haak, M., Belmann, P., Jünemann, S., Schulz, T., et al. (2021). Multiple Occurrences of a 168-Nucleotide Deletion in SARS-CoV-2 ORF8, Unnoticed by Standard Amplicon Sequencing and Variant Calling Pipelines. Viruses, 13(9), 1870. https://doi.org/10.3390/v13091870
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[11]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2956600
Schaffert, L., Ruwe, M., Milse, J., Hanuschka, K., Ortseifen, V., Droste, J., Brandt, D., et al. (2021). Classification of three corynebacterial strains isolated from a small paddock in North Rhine-Westphalia: proposal of Corynebacterium kalinowskii sp. nov., Corynebacterium comes sp. nov. and Corynebacterium occultum sp. nov. International Journal of Systematic and Evolutionary Microbiology, 71(8). https://doi.org/10.1099/ijsem.0.004933
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
[10]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2955512
Aevarsson, A., Kaczorowska, A. - K., Adalsteinsson, B. T., Ahlqvist, J., Al-Karadaghi, S., Altenbuchner, J., Arsin, H., et al. (2021). Going to extremes - a metagenomic journey into the dark matter of life. FEMS microbiology letters, fnab067. https://doi.org/10.1093/femsle/fnab067
PUB | DOI | WoS | PubMed | Europe PMC
 
[9]
2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2956159
Medvedeva, S., Brandt, D., Cvirkaite-Krupovic, V., Liu, Y., Severinov, K., Ishino, S., Ishino, Y., et al. (Accepted). New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae. Environmental microbiology. https://doi.org/10.1111/1462-2920.15654
PUB | DOI | WoS | PubMed | Europe PMC
 
[8]
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2955919
Schmitz, L. M., Hageneier, F., Rosenthal, K., Busche, T., Brandt, D., Kalinowski, J., & Lutz, S. (2021). Recombinant expression and characterization of novel P450s from Actinosynnema mirum. Bioorganic & medicinal chemistry, 42, 116241. https://doi.org/10.1016/j.bmc.2021.116241
PUB | DOI | WoS | PubMed | Europe PMC
 
[7]
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2951141
Blanc-Mathieu, R., Dahle, H., Hofgaard, A., Brandt, D., Ban, H., Kalinowski, J., Ogata, H., et al. (2021). A persistent giant algal virus, with a unique morphology, encodes an unprecedented number of genes involved in energy metabolism. Journal of virology. https://doi.org/10.1128/JVI.02446-20
PUB | DOI | WoS | PubMed | Europe PMC
 
[6]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946260 OA
Radukic, M., Brandt, D., Haak, M., Müller, K., & Kalinowski, J. (2020). Nanopore sequencing of native adeno-associated virus (AAV) single-stranded DNA using a transposase-based rapid protocol. NAR Genomics and Bioinformatics, 2(4), lqaa074. https://doi.org/10.1093/nargab/lqaa074
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[5]
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946299 OA
Kreienbaum, M., Dörrich, A. K., Brandt, D., Schmid, N. E., Leonhard, T., Hager, F., Brenzinger, S., et al. (2020). Isolation and Characterization of Shewanella Phage Thanatos Infecting and Lysing Shewanella oneidensis and Promoting Nascent Biofilm Formation. Frontiers in Microbiology, 11, 573260. doi:10.3389/fmicb.2020.573260
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
[4]
2020 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2943812
Radukic, M., Brandt, D., Haak, M., Kalinowski, J., & Müller, K. (2020). Long-Read Characterization of Adeno-Associated Virus Packaged DNA by Direct Nanopore Sequencing Reveals Genome Fusions and Recombination between Genomes and Producer Plasmids. MOLECULAR THERAPY, 28, 398-399. Cambridge: Cell Press.
PUB | WoS
 
[3]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413 OA
Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., et al. (2019). Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology, 10, 2448. doi:10.3389/fmicb.2019.02448
PUB | Dateien verfügbar | DOI | Download (ext.) | WoS | PubMed | Europe PMC | EBI - ENA Project
 
[2]
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439 OA
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18(1), 114. doi:10.1186/s12934-019-1162-5
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
[1]
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935511
Liu, Y., Brandt, D., Ishino, S., Ishino, Y., Koonin, E. V., Kalinowski, J., Krupovic, M., et al. (2018). New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures. Environmental Microbiology, 21(6), 2002-2014. doi:10.1111/1462-2920.14479
PUB | DOI | WoS | PubMed | Europe PMC
 
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