20 Publikationen
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723
Kloster, Michael, Langenkämper, Daniel, Zurowietz, Martin, Beszteri, Bánk, and Nattkemper, Tim Wilhelm. “Deep learning-based diatom taxonomy on virtual slides”. Scientific Reports 10.1 (2020): 14416.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381
Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. “Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 7 (2020): 617268.
PUB | DOI | Download (ext.) | WoS
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944775
Schoening, Timm, Purser, Autun, Langenkämper, Daniel, Suck, Inken, Taylor, James, Cuvelier, Daphne, Lins, Lidia, Simon-Lledo, Erik, Marcon, Yann, Jones, Daniel O. B., Nattkemper, Tim W., Koeser, Kevin, Zurowietz, Martin, Gomes-Pereira, Jose, and Greinert, Jens. “Megafauna community assessment of polymetallic-nodule fields with cameras: platform and methodology comparison”. BIOGEOSCIENCES 17.12 (2020): 3115-3133.
PUB | DOI | WoS
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944758

Langenkämper, Daniel, van Kevelaer, Robin, Purser, Autun, and Nattkemper, Tim Wilhelm. “Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification”. Frontiers in Marine Science 7 (2020): 506.
PUB
| PDF | DOI | WoS
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069

Langenkämper, Daniel, Simon-Lledó, Erik, Hosking, Brett, Jones, Daniel O. B., and Nattkemper, Tim Wilhelm. “On the impact of Citizen Science-derived data quality on deep learning based classification in marine images”. PLOS ONE 14.6 (2019): e0218086.
PUB
| PDF | DOI | WoS | PubMed | Europe PMC
2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366
Zurowietz, Martin, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “BIIGLE2Go - A scalable image annotation system for easy deployment on cruises”. Proceedings of IEEE OCEANS 2019. 2019.
PUB | DOI | Download (ext.)
2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705
Möller, Torben, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “Wind turbine segmentation performing kNN-clustering on superpixel segmentations”. Image and Signal Processing for Remote Sensing XXV. Ed. Lorenzo Bruzzone and Francesca Bovolo. In Press.Vol. 11155. Image and Signal Processing for Remote Sensing XXV. Proceedings.
PUB
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066

Zurowietz, Martin, Langenkämper, Daniel, Hosking, Brett, Ruhl, Henry, and Nattkemper, Tim Wilhelm. “MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration ”. PLoS ONE 13.11 (2018): e0207498.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039

Langenkämper, Daniel, van Kevelaer, Robin, and Nattkemper, Tim Wilhelm. “Strategies for Tackling the Class Imbalance Problem in Marine Image Classification”. Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing, Accepted.
PUB
| PDF
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190

Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. “BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 4.March (2017): 83.
PUB
| Dateien verfügbar | DOI | WoS
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477
Ahmed Raza, Shan E, Langenkämper, Daniel, Sirinukunwattana, Korsuk, Epstein, David, Nattkemper, Tim Wilhelm, and Rajpoot, Nasir M. “Robust normalization protocols for multiplexed fluorescence bioimage analysis”. BioData Mining 9.1 (2016): 11.
PUB | DOI | WoS | PubMed | Europe PMC
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, Daniel, Jakobi, Tobias, Feld, Dustin, Jelonek, Lukas, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”. Frontiers in Genetics 7 (2016): 5.
PUB | DOI | WoS | PubMed | Europe PMC
2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670
Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data”. Proceedings of the International Conference on Pattern Recognition (ICPR). Accepted.
PUB
2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947
Schoening, Timm, Langenkämper, Daniel, Steinbrink, Björn, Brün, Daniel, and Nattkemper, Tim Wilhelm. “Rapid image processing and classification in underwater exploration using advanced high performance computing”. Proc. of the IEEE Oceans. Washington DC, USA: IEEE, In Press.
PUB
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712

Langenkämper, Daniel, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization”. BMC Bioinformatics 15.1 (2014): 384.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783

Kölling, Jan, Langenkämper, Daniel, Sylvie, Abouna, Michale, Khan, and Nattkemper, Tim Wilhelm. “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”. Bioinformatics 28.8 (2012): 1143-1150.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232

Loyek, Christian, Kölling, Jan, Langenkämper, Daniel, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages”. Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings. Ed. João Gama, Elizabeth Bradley, and Jaakko Hollmén. Berlin, Heidelberg: Springer, 2011.Vol. 7014. Lecture Notes in Computer Science. 258-269.
PUB
| PDF | DOI
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300237

Langenkämper, Daniel, Kölling, Jan, Khan, Michael, Rajpoot, Nasir, and Nattkemper, Tim Wilhelm. “Towards Protein Network Analysis using TIS Imaging and Exploratory Data Analysis”. Presented at the Workshop on Computational Systems Biology (WCSB), Zürich, Switzerland, 2011.
PUB
| PDF
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705

Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany, 2011.
PUB
| PDF | Download (ext.)
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20 Publikationen
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945723
Kloster, Michael, Langenkämper, Daniel, Zurowietz, Martin, Beszteri, Bánk, and Nattkemper, Tim Wilhelm. “Deep learning-based diatom taxonomy on virtual slides”. Scientific Reports 10.1 (2020): 14416.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948381
Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. “Corrigendum: BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 7 (2020): 617268.
PUB | DOI | Download (ext.) | WoS
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944775
Schoening, Timm, Purser, Autun, Langenkämper, Daniel, Suck, Inken, Taylor, James, Cuvelier, Daphne, Lins, Lidia, Simon-Lledo, Erik, Marcon, Yann, Jones, Daniel O. B., Nattkemper, Tim W., Koeser, Kevin, Zurowietz, Martin, Gomes-Pereira, Jose, and Greinert, Jens. “Megafauna community assessment of polymetallic-nodule fields with cameras: platform and methodology comparison”. BIOGEOSCIENCES 17.12 (2020): 3115-3133.
PUB | DOI | WoS
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944758

Langenkämper, Daniel, van Kevelaer, Robin, Purser, Autun, and Nattkemper, Tim Wilhelm. “Gear-Induced Concept Drift in Marine Images and Its Effect on Deep Learning Classification”. Frontiers in Marine Science 7 (2020): 506.
PUB
| PDF | DOI | WoS
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936069

Langenkämper, Daniel, Simon-Lledó, Erik, Hosking, Brett, Jones, Daniel O. B., and Nattkemper, Tim Wilhelm. “On the impact of Citizen Science-derived data quality on deep learning based classification in marine images”. PLOS ONE 14.6 (2019): e0218086.
PUB
| PDF | DOI | WoS | PubMed | Europe PMC
2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2935366
Zurowietz, Martin, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “BIIGLE2Go - A scalable image annotation system for easy deployment on cruises”. Proceedings of IEEE OCEANS 2019. 2019.
PUB | DOI | Download (ext.)
2019 | Konferenzbeitrag | Im Druck | PUB-ID: 2937705
Möller, Torben, Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “Wind turbine segmentation performing kNN-clustering on superpixel segmentations”. Image and Signal Processing for Remote Sensing XXV. Ed. Lorenzo Bruzzone and Francesca Bovolo. In Press.Vol. 11155. Image and Signal Processing for Remote Sensing XXV. Proceedings.
PUB
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932066

Zurowietz, Martin, Langenkämper, Daniel, Hosking, Brett, Ruhl, Henry, and Nattkemper, Tim Wilhelm. “MAIA - A machine learning assisted image annotation method for environmental monitoring and exploration ”. PLoS ONE 13.11 (2018): e0207498.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2018 | Konferenzbeitrag | Angenommen | PUB-ID: 2921039

Langenkämper, Daniel, van Kevelaer, Robin, and Nattkemper, Tim Wilhelm. “Strategies for Tackling the Class Imbalance Problem in Marine Image Classification”. Presented at the International Conference on Pattern Recognition 2018, Computer Vision for Automated Analysis of Underwater Imagery Workshop, Beijing, Accepted.
PUB
| PDF
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909190

Langenkämper, Daniel, Zurowietz, Martin, Schoening, Timm, and Nattkemper, Tim Wilhelm. “BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections”. Frontiers in Marine Science 4.March (2017): 83.
PUB
| Dateien verfügbar | DOI | WoS
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477
Ahmed Raza, Shan E, Langenkämper, Daniel, Sirinukunwattana, Korsuk, Epstein, David, Nattkemper, Tim Wilhelm, and Rajpoot, Nasir M. “Robust normalization protocols for multiplexed fluorescence bioimage analysis”. BioData Mining 9.1 (2016): 11.
PUB | DOI | WoS | PubMed | Europe PMC
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, Daniel, Jakobi, Tobias, Feld, Dustin, Jelonek, Lukas, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”. Frontiers in Genetics 7 (2016): 5.
PUB | DOI | WoS | PubMed | Europe PMC
2016 | Konferenzbeitrag | Angenommen | PUB-ID: 2904670
Langenkämper, Daniel, and Nattkemper, Tim Wilhelm. “COATL - A Learning Architecture for Online Real-Time Detection and Classification Assistance for Environmental Data”. Proceedings of the International Conference on Pattern Recognition (ICPR). Accepted.
PUB
2015 | Konferenzbeitrag | Im Druck | PUB-ID: 2775947
Schoening, Timm, Langenkämper, Daniel, Steinbrink, Björn, Brün, Daniel, and Nattkemper, Tim Wilhelm. “Rapid image processing and classification in underwater exploration using advanced high performance computing”. Proc. of the IEEE Oceans. Washington DC, USA: IEEE, In Press.
PUB
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712

Langenkämper, Daniel, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization”. BMC Bioinformatics 15.1 (2014): 384.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783

Kölling, Jan, Langenkämper, Daniel, Sylvie, Abouna, Michale, Khan, and Nattkemper, Tim Wilhelm. “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”. Bioinformatics 28.8 (2012): 1143-1150.
PUB
| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300232

Loyek, Christian, Kölling, Jan, Langenkämper, Daniel, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “A Web2.0 Strategy for the Collaborative Analysis of Complex Bioimages”. Advances in Intelligent Data Analysis X: 10th International Symposium, IDA 2011, Porto, Portugal, October 29-31, 2011. Proceedings. Ed. João Gama, Elizabeth Bradley, and Jaakko Hollmén. Berlin, Heidelberg: Springer, 2011.Vol. 7014. Lecture Notes in Computer Science. 258-269.
PUB
| PDF | DOI
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2300237

Langenkämper, Daniel, Kölling, Jan, Khan, Michael, Rajpoot, Nasir, and Nattkemper, Tim Wilhelm. “Towards Protein Network Analysis using TIS Imaging and Exploratory Data Analysis”. Presented at the Workshop on Computational Systems Biology (WCSB), Zürich, Switzerland, 2011.
PUB
| PDF
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2323705

Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany, 2011.
PUB
| PDF | Download (ext.)