TICAL - a web-tool for multivariate image clustering and data topology preserving visualization

Langenkämper D, Kölling J, Abouna S, Khan M, Niehaus K, Nattkemper TW (2011)
Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.

Konferenzbeitrag | Veröffentlicht| Englisch
 
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Abstract / Bemerkung
In life science research bioimaging is often used to study two kinds of features in a sample simultaneously: morphology and co-location of molecular components. While bioimaging technology is rapidly proposing and improving new multidimensional imaging platforms, bioimage informatics has to keep pace in order to develop algorithmic approaches to support biology experts in the complex task of data analysis. One particular problem is the availability and applicability of sophisticated image analysis algorithms via the web so different users can apply the same algorithms to their data (sometimes even to the same data to get the same results) and independently from her/his whereabouts and from the technical features of her/his computer. In this paper we describe TICAL, a visual data mining approach to multivariate microscopy analysis which can be applied fully through the web.We describe the algorithmic approach, the software concept and present results obtained for different example images.
Stichworte
fluorescence microscopy; high-content screening; MALDI imaging; multi-tag imaging; MELC; TIS; visual datamining; visualization; machine learning; clustering; dimensional reduction; multivariate bioimage analysis; bioimage informatics
Erscheinungsjahr
2011
Konferenz
Microscopic Image Analysis with Applications in Biology (MIAAB)
Konferenzort
Heidelberg, Germany
Konferenzdatum
2011-09-02 – 2011-09-02
Page URI
https://pub.uni-bielefeld.de/record/2323705

Zitieren

Langenkämper D, Kölling J, Abouna S, Khan M, Niehaus K, Nattkemper TW. TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.
Langenkämper, D., Kölling, J., Abouna, S., Khan, M., Niehaus, K., & Nattkemper, T. W. (2011). TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.
Langenkämper, D., Kölling, J., Abouna, S., Khan, M., Niehaus, K., and Nattkemper, T. W. (2011).“TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.
Langenkämper, D., et al., 2011. TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany.
D. Langenkämper, et al., “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”, Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany, 2011.
Langenkämper, D., Kölling, J., Abouna, S., Khan, M., Niehaus, K., Nattkemper, T.W.: TICAL - a web-tool for multivariate image clustering and data topology preserving visualization. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany (2011).
Langenkämper, Daniel, Kölling, Jan, Abouna, Sylvie, Khan, Michael, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “TICAL - a web-tool for multivariate image clustering and data topology preserving visualization”. Presented at the Microscopic Image Analysis with Applications in Biology (MIAAB), Heidelberg, Germany, 2011.
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