Heiko Neuweger
PEVZ-ID
24 Publikationen
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694652Bonte, Anja, Neuweger, Heiko, Goesmann, Alexander, Thonar, Cécile, Mäder, Paul, Langenkämper, Georg, and Niehaus, Karsten. “Metabolite profiling on wheat grain to enable a distinction of samples from organic and conventional farming systems”. Journal of the science of food and agriculture 94.13 (2014): 2605-2612.PUB | DOI | WoS | PubMed | Europe PMC
-
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699819Schatschneider, Sarah, Huber, Claudia, Neuweger, Heiko, Watt, Tony, Pühler, Alfred, Eisenreich, Wolfgang, Wittmann, Christoph, Niehaus, Karsten, and Vorhölter, Frank-Jörg. “Metabolic flux pattern of glucose utilization by Xanthomonas campestris pv. campestris: prevalent role of the Entner-Doudoroff pathway and minor fluxes through the pentose phosphate pathway and glycolysis”. Molecular BioSystems 10.10 (2014): 2663-2676.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239Hoffmann, Nils, Keck, Matthias, Neuweger, Heiko, Wilhelm, Mathias, Högy, Petra, Niehaus, Karsten, and Stoye, Jens. “Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets”. BMC Bioinformatics 13.1 (2012): 21.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2500990Rose, Michael T, Rose, Terry J, Pariasca-Tanaka, Juan, Yoshihashi, Tadashi, Neuweger, Heiko, Goesmann, Alexander, Frei, Michael, and Wissuwa, Matthias. “Root metabolic response of rice (Oryza sativa L.) genotypes with contrasting tolerance to zinc deficiency and bicarbonate excess”. Planta 236.4 (2012): 959-973.PUB | DOI | WoS | PubMed | Europe PMC
-
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2405255Persicke, Marcus, Rückert, Christian, Plassmeier, Jens, Stutz, Leonhard, Kessler, Nikolas, Kalinowski, Jörn, Goesmann, Alexander, and Neuweger, Heiko. “MSEA: metabolite set enrichment analysis in the MeltDB metabolomics software platform: metabolic profiling of Corynebacterium glutamicum as an example”. Metabolomics 8.2 (2012): 310-322.PUB | DOI | WoS
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944855Persicke, Marcus, Plassmeier, Jens, Neuweger, Heiko, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Erratum to “Size exclusion chromatography—An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites” [J. Biotechnol. 154 (2–3) (2011) 171–178]”. Journal of Biotechnology 155.2 (2011): 266-267.PUB | DOI | WoS
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289494Persicke, Marcus, Plassmeier, Jens, Neuweger, Heiko, Rückert, Christian, Pühler, Alfred, and Kalinowski, Jörn. “Size exclusion chromatography-An improved method to harvest Corynebacterium glutamicum cells for the analysis of cytosolic metabolites”. Journal of Biotechnology 154.2-3 (2011): 171-178.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445Schneider, Jessica, Blom, Jochen, Jaenicke, Sebastian, Linke, Burkhard, Brinkrolf, Karina, Neuweger, Heiko, Tauch, Andreas, and Goesmann, Alexander. “RAPYD - Rapid Annotation Platform for Yeast Data”. Journal of Biotechnology 155.1 (2011): 118-126.PUB | DOI | WoS | PubMed | Europe PMC
-
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892Schneiker-Bekel, Susanne, Wibberg, Daniel, Bekel, Thomas, Blom, Jochen, Linke, Burkhard, Neuweger, Heiko, Stiens, Michael, Vorhölter, Frank-Jörg, Weidner, Stefan, Goesmann, Alexander, Pühler, Alfred, and Schlüter, Andreas. “The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome”. Journal of Biotechnology 155.1 (In Press): 20-33.PUB | DOI | WoS | PubMed | Europe PMC
-
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692Schneider, Jessica, Vorhölter, Frank-Jörg, Trost, Eva, Blom, Jochen, Musa, Y. R., Neuweger, Heiko, Niehaus, Karsten, Schatschneider, Sarah, Tauch, Andreas, and Goesmann, Alexander. “CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks”. Genetics and Molecular Research 9.3 (2010): 1660-1672.PUB | DOI | WoS | PubMed | Europe PMC
-
2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907Mittard-Runte, Virginie, Bekel, Thomas, Blom, Jochen, Dondrup, Michael, Henckel, Kolja, Jaenicke, Sebastian, Krause, Lutz, Linke, Burkhard, Neuweger, Heiko, Schneiker-Bekel, Susanne, and Goesmann, Alexander. “Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions”. Introduction to Marine Genomics (Advances in Marine Genomics). Ed. J. Mark Cock, Kristin Tessmar-Raible, Catherine Boyen, and Frédérique Viard. Netherlands: Springer Netherlands, 2010.Vol. 1. 315-396.PUB | DOI
-
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783813Neuweger, Heiko, Persicke, Marcus, Albaum, Stefan, Bekel, Thomas, Dondrup, Michael, Hüser, Andrea T., Winnebald, Jörn, Schneider, Jessica, Kalinowski, Jörn, and Goesmann, Alexander. “Visualizing post genomics data-sets on customized pathway maps by ProMeTra – aeration-dependent gene expression and metabolism of Corynebacterium glutamicum as an example”. BMC Systems Biology 3.1 (2009): 82.PUB | PDF | DOI | PubMed | Europe PMC
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321Dondrup, Michael, Albaum, Stefan, Griebel, Thasso, Henckel, Kolja, Jünemann, Sebastian, Kahlke, Tim, Kleindt, Christiane Katja, Kuester, Helge, Linke, Burkhard, Mertens, Dominik, Mittard-Runte, Virginie, Neuweger, Heiko, Runte, Kai J., Tauch, Andreas, Tille, Felix, Pühler, Alfred, and Goesmann, Alexander. “EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data”. BMC Bioinformatics 10.1 (2009): 50.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531Albaum, Stefan, Neuweger, Heiko, Fraenzel, Benjamin, Lange, Sita, Mertens, Dominik, Troetschel, Christian, Wolters, Dirk, Kalinowski, Jörn, Nattkemper, Tim Wilhelm, and Goesmann, Alexander. “Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments”. Bioinformatics 25.23 (2009): 3128-3134.PUB | DOI | WoS | PubMed | Europe PMC
-
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447Bekel, Thomas, Henckel, Kolja, Küster, Helge, Meyer, Folker, Mittard-Runte, Virginie, Neuweger, Heiko, Paarmann, Daniel, Rupp, Oliver, Zakrzewski, Martha, Pühler, Alfred, Stoye, Jens, and Goesmann, Alexander. “The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies”. Journal of Biotechnology 140.1-2 (2009): 3-12.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636699Neuweger, Heiko, Albaum, Stefan, Dondrup, Michael, Persicke, Marcus, Watt, Tony, Niehaus, Karsten, Stoye, Jens, and Goesmann, Alexander. “MeltDB: a software platform for the analysis and integration of metabolomics experiment data”. Bioinformatics 24.23 (2008): 2726-2732.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009Krause, Lutz, Diaz, Naryttza N., Edwards, Robert A., Gartemann, Karl-Heinz, Krömeke, Holger, Neuweger, Heiko, Pühler, Alfred, Runte, Kai J., Schlüter, Andreas, Stoye, Jens, Szczepanowski, Rafael, Tauch, Andreas, and Goesmann, Alexander. “Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor”. JOURNAL OF BIOTECHNOLOGY 136.1-2 (2008): 91-101.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585987Schlüter, Andreas, Bekel, Thomas, Diaz, Naryttza N., Dondrup, Michael, Eichenlaub, Rudolf, Gartemann, Karl-Heinz, Krahn, Irene, Krause, Lutz, Kroemeke, Holger, Kruse, Olaf, Mussgnug, Jan H., Neuweger, Heiko, Niehaus, Karsten, Pühler, Alfred, Runte, Kai J., Szczepanowski, Rafael, Tauch, Andreas, Tilker, Alexandra, Viehöver, Prisca, and Goesmann, Alexander. “The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology”. Journal of Biotechnology 136.1-2 (2008): 77-90.PUB | DOI | WoS | PubMed | Europe PMC
-
2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381Albaum, Stefan, Neuweger, Heiko, Lange, Sita, Mertens, Dominik, Runte, Kai, Kalinowski, Jörn, Nattkemper, Tim Wilhelm, and Goesmann, Alexander. “ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)”. HUPO 7th Annual World Congress. 2008.PUB
-
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783754Neuweger, Heiko, Baumbach, Jan, Albaum, Stefan, Bekel, Thomas, Dondrup, Michael, Hüser, Andrea T., Kalinowski, Jörn, Oehm, Sebastian, Pühler, Alfred, Rahmann, Sven, Weile, Jochen, and Goesmann, Alexander. “CoryneCenter: an online resource for the integrated analysis of corynebacterial genome and transcriptome data”. BMC Systems Biology 1.1 (2007): 55.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2382786Linke, Burkhard, McHardy, Alice Carolyn, Neuweger, Heiko, Krause, Lutz, and Meyer, Folker. “The REGANOR gene prediction server for prokaryotic genomes and a database of high quality gene predictions for prokaryotes”. Applied Bioinformatics 5.3 (2006): 193-198.PUB | DOI
-
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652Overbeek, Ross, Begley, Tadhg, Butler, Ralph M., Choudhuri, Jomuna V., Chuang, Han-Yu, Cohoon, Matthew, Crécy-Lagard, Valérie de, Diaz, Naryttza N., Disz, Terry, Edwards, Robert, Fonstein, Michael, Frank, Ed D., Gerdes, Svetlana, Glass, Elizabeth M., Goesmann, Alexander, Hanson, Andrew, Iwata-Reuyl, Dirk, Jensen, Roy, Jamshidi, Neema, Krause, Lutz, Kubal, Michael, Larsen, Niels, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Neuweger, Heiko, Olsen, Gary, Olson, Robert, Osterman, Andrei, Portnoy, Vasiliy, Pusch, Gordon D., Rodionov, Dmitry A., Rückert, Christian, Steiner, Jason, Stevens, Rick, Thiele, Ines, Vassieva, Olga, Ye, Yuzhen, Zagnitko, Olga, and Vonstein, Veronika. “The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes”. Nucleic Acids Research 33.17 (2005): 5691-5702.PUB | PDF | DOI | WoS | PubMed | Europe PMC
-
2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644Goesmann, Alexander, Linke, Burkhard, Bartels, Daniela, Dondrup, Michael, Krause, Lutz, Neuweger, Heiko, Oehm, Sebastian, Paczian, Tobias, Wilke, Andreas, and Meyer, Folker. “BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser”. Nucleic Acids Research 33.Web Server (2005): W710-W716.PUB | PDF | DOI | WoS | PubMed | Europe PMC