On sorting by translocations

Bergeron A, Mixtacki J, Stoye J (2006)
JOURNAL OF COMPUTATIONAL BIOLOGY 13(2): 567-578.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Autor*in
Bergeron, Anne; Mixtacki, Julia; Stoye, JensUniBi
Abstract / Bemerkung
The study of genome rearrangements is an important tool in comparative genomics. This paper revisits the problem of sorting a multichromosomal genome by translocations, i.e., exchanges of chromosome ends. We give an elementary proof of the formula for computing the translocation distance in linear time, and we give a new algorithm for sorting by translocations, correcting an error in a previous algorithm by Hannenhalli.
Stichworte
comparative genomics; genome rearrangement; sorting by translocations; translocation distance
Erscheinungsjahr
2006
Zeitschriftentitel
JOURNAL OF COMPUTATIONAL BIOLOGY
Band
13
Ausgabe
2
Seite(n)
567-578
ISSN
1066-5277
eISSN
1557-8666
Page URI
https://pub.uni-bielefeld.de/record/1599574

Zitieren

Bergeron A, Mixtacki J, Stoye J. On sorting by translocations. JOURNAL OF COMPUTATIONAL BIOLOGY. 2006;13(2):567-578.
Bergeron, A., Mixtacki, J., & Stoye, J. (2006). On sorting by translocations. JOURNAL OF COMPUTATIONAL BIOLOGY, 13(2), 567-578. https://doi.org/10.1089/cmb.2006.13.567
Bergeron, Anne, Mixtacki, Julia, and Stoye, Jens. 2006. “On sorting by translocations”. JOURNAL OF COMPUTATIONAL BIOLOGY 13 (2): 567-578.
Bergeron, A., Mixtacki, J., and Stoye, J. (2006). On sorting by translocations. JOURNAL OF COMPUTATIONAL BIOLOGY 13, 567-578.
Bergeron, A., Mixtacki, J., & Stoye, J., 2006. On sorting by translocations. JOURNAL OF COMPUTATIONAL BIOLOGY, 13(2), p 567-578.
A. Bergeron, J. Mixtacki, and J. Stoye, “On sorting by translocations”, JOURNAL OF COMPUTATIONAL BIOLOGY, vol. 13, 2006, pp. 567-578.
Bergeron, A., Mixtacki, J., Stoye, J.: On sorting by translocations. JOURNAL OF COMPUTATIONAL BIOLOGY. 13, 567-578 (2006).
Bergeron, Anne, Mixtacki, Julia, and Stoye, Jens. “On sorting by translocations”. JOURNAL OF COMPUTATIONAL BIOLOGY 13.2 (2006): 567-578.

9 Zitationen in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

A unifying model of genome evolution under parsimony.
Paten B, Zerbino DR, Hickey G, Haussler D., BMC Bioinformatics 15(), 2014
PMID: 24946830
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Hilker R, Sickinger C, Pedersen CN, Stoye J., Bioinformatics 28(19), 2012
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Huang KH, Chen KT, Lu CL., BMC Genomics 12 Suppl 3(), 2011
PMID: 22369173
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Qi X, Li G, Li S, Xu Y., IEEE/ACM Trans Comput Biol Bioinform 7(2), 2010
PMID: 20431155
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Cui Y, Wang L, Zhu D, Liu X., IEEE/ACM Trans Comput Biol Bioinform 5(1), 2008
PMID: 18245875
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Ozery-Flato M, Shamir R., J Comput Biol 15(7), 2008
PMID: 18652529
Sorting by reciprocal translocations via reversals theory.
Ozery-Flato M, Shamir R., J Comput Biol 14(4), 2007
PMID: 17572020

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