Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions
Ackermann F, Herrmann G, Kummert F, Posch S, Sagerer G, Schomburg D (1995)
In: Proceedings Third International Conference on Intelligent Systems for Molecular Biology. Rawlings C, Clark D, Altman R, Hunter L, Lengauer T, Wodak S (Eds); , 3. Menlo Park: AAAI Press: 3-11.
Konferenzbeitrag
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Ackermann, Friedrich;
Herrmann, Grit;
Kummert, FranzUniBi;
Posch, S.;
Sagerer, GerhardUniBi;
Schomburg, D.
Herausgeber*in
Rawlings, C.;
Clark, D.;
Altman, R.;
Hunter, L.;
Lengauer, Th.;
Wodak, S.
Einrichtung
Abstract / Bemerkung
With the growing number of known 3D protein structures, computing systems, that can predict where two protein molecules interact with each other is becoming of increasing interest. A system is presented, integrating preprocessing like the computation of molecular surfaces, segmentation, and searching for complementarity in the general framework of a pattern analyzing semantic network (ERNEST). The score of coarse symbolic computations is used by the problem independent control strategy of ERNEST to guide a more detailed analysis considering steric clash and judgements based on gridâbased surface representations. Successfull examples of the docking system are discussed that compare well with other approaches.
Stichworte
ERNEST;
grid-based scoring;
symbolic docking;
BIOWEPRO;
Docking
Erscheinungsjahr
1995
Titel des Konferenzbandes
Proceedings Third International Conference on Intelligent Systems for Molecular Biology
Band
3
Seite(n)
3-11
ISSN
1553-0833
Page URI
https://pub.uni-bielefeld.de/record/2619254
Zitieren
Ackermann F, Herrmann G, Kummert F, Posch S, Sagerer G, Schomburg D. Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. In: Rawlings C, Clark D, Altman R, Hunter L, Lengauer T, Wodak S, eds. Proceedings Third International Conference on Intelligent Systems for Molecular Biology. Vol 3. Menlo Park: AAAI Press; 1995: 3-11.
Ackermann, F., Herrmann, G., Kummert, F., Posch, S., Sagerer, G., & Schomburg, D. (1995). Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. In C. Rawlings, D. Clark, R. Altman, L. Hunter, T. Lengauer, & S. Wodak (Eds.), Proceedings Third International Conference on Intelligent Systems for Molecular Biology (Vol. 3, pp. 3-11). Menlo Park: AAAI Press.
Ackermann, Friedrich, Herrmann, Grit, Kummert, Franz, Posch, S., Sagerer, Gerhard, and Schomburg, D. 1995. “Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions”. In Proceedings Third International Conference on Intelligent Systems for Molecular Biology, ed. C. Rawlings, D. Clark, R. Altman, L. Hunter, Th. Lengauer, and S. Wodak, 3:3-11. Menlo Park: AAAI Press.
Ackermann, F., Herrmann, G., Kummert, F., Posch, S., Sagerer, G., and Schomburg, D. (1995). “Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions” in Proceedings Third International Conference on Intelligent Systems for Molecular Biology, Rawlings, C., Clark, D., Altman, R., Hunter, L., Lengauer, T., and Wodak, S. eds., vol. 3, (Menlo Park: AAAI Press), 3-11.
Ackermann, F., et al., 1995. Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. In C. Rawlings, et al., eds. Proceedings Third International Conference on Intelligent Systems for Molecular Biology. no.3 Menlo Park: AAAI Press, pp. 3-11.
F. Ackermann, et al., “Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions”, Proceedings Third International Conference on Intelligent Systems for Molecular Biology, C. Rawlings, et al., eds., vol. 3, Menlo Park: AAAI Press, 1995, pp.3-11.
Ackermann, F., Herrmann, G., Kummert, F., Posch, S., Sagerer, G., Schomburg, D.: Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. In: Rawlings, C., Clark, D., Altman, R., Hunter, L., Lengauer, T., and Wodak, S. (eds.) Proceedings Third International Conference on Intelligent Systems for Molecular Biology. 3, p. 3-11. Menlo Park: AAAI Press (1995).
Ackermann, Friedrich, Herrmann, Grit, Kummert, Franz, Posch, S., Sagerer, Gerhard, and Schomburg, D. “Protein Docking Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions”. Proceedings Third International Conference on Intelligent Systems for Molecular Biology. Ed. C. Rawlings, D. Clark, R. Altman, L. Hunter, Th. Lengauer, and S. Wodak. Menlo Park: AAAI Press, 1995.Vol. 3. 3-11.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
1 Zitation in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Analogue inhibitors by modifying oseltamivir based on the crystal neuraminidase structure for treating drug-resistant H5N1 virus.
Du QS, Wang SQ, Chou KC., Biochem Biophys Res Commun 362(2), 2007
PMID: 17707775
Du QS, Wang SQ, Chou KC., Biochem Biophys Res Commun 362(2), 2007
PMID: 17707775
References
Daten bereitgestellt von Europe PubMed Central.
Export
Markieren/ Markierung löschen
Markierte Publikationen
Quellen
PMID: 7584450
PubMed | Europe PMC
Suchen in
Google Scholar