PUB - Publikationen an der Universität Bielefeld

Novel tools for characterising inter and intra chromosomal rearrangements in avian microchromosomes.
Lithgow PE, O'Connor R, Smith D, Fonseka G, Al Mutery A, Rathje C, Frodsham R, O'Brien P, Kasai F, Ferguson-Smith MA, Skinner BM, Griffin DK., Chromosome Res 22(1), 2014
PMID: 24696127

Intrachromosomal rearrangements in avian genome evolution: evidence for regions prone to breakpoints.
Skinner BM, Griffin DK., Heredity (Edinb) 108(1), 2012
PMID: 22045382

Comparative sequence analysis of VRN1 alleles of Lolium perenne with the co-linear regions in barley, wheat, and rice.
Asp T, Byrne S, Gundlach H, Bruggmann R, Mayer KF, Andersen JR, Xu M, Greve M, Lenk I, Lübberstedt T., Mol Genet Genomics 286(5-6), 2011
PMID: 22081040

Refinement of Bos taurus sequence assembly based on BAC-FISH experiments.
Partipilo G, D'Addabbo P, Lacalandra GM, Liu GE, Rocchi M., BMC Genomics 12(), 2011
PMID: 22208360

Copy number variation, chromosome rearrangement, and their association with recombination during avian evolution.
Völker M, Backström N, Skinner BM, Langley EJ, Bunzey SK, Ellegren H, Griffin DK., Genome Res 20(4), 2010
PMID: 20357050

Circos: an information aesthetic for comparative genomics.
Krzywinski M, Schein J, Birol I, Connors J, Gascoyne R, Horsman D, Jones SJ, Marra MA., Genome Res 19(9), 2009
PMID: 19541911

BOV--a web-based BLAST output visualization tool.
Gollapudi R, Revanna KV, Hemmerich C, Schaack S, Dong Q., BMC Genomics 9(), 2008
PMID: 18793422

The chloroplast genome sequence of the green alga Leptosira terrestris: multiple losses of the inverted repeat and extensive genome rearrangements within the Trebouxiophyceae.
de Cambiaire JC, Otis C, Turmel M, Lemieux C., BMC Genomics 8(), 2007
PMID: 17610731

Complete genome sequence of the myxobacterium Sorangium cellulosum.
Schneiker S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, Bolten CJ, Choudhuri JV, Doss S, Elnakady YA, Frank B, Gaigalat L, Goesmann A, Groeger C, Gross F, Jelsbak L, Jelsbak L, Kalinowski J, Kegler C, Knauber T, Konietzny S, Kopp M, Krause L, Krug D, Linke B, Mahmud T, Martinez-Arias R, McHardy AC, Merai M, Meyer F, Mormann S, Muñoz-Dorado J, Perez J, Pradella S, Rachid S, Raddatz G, Rosenau F, Rückert C, Sasse F, Scharfe M, Schuster SC, Suen G, Treuner-Lange A, Velicer GJ, Vorhölter FJ, Weissman KJ, Welch RD, Wenzel SC, Whitworth DE, Wilhelm S, Wittmann C, Blöcker H, Pühler A, Müller R., Nat Biotechnol 25(11), 2007
PMID: 17965706

COMPAM :visualization of combining pairwise alignments for multiple genomes.
Lee D, Choi JH, Dalkilic MM, Kim S., Bioinformatics 22(2), 2006
PMID: 16269416

MYC-containing double minutes in hematologic malignancies: evidence in favor of the episome model and exclusion of MYC as the target gene.
Storlazzi CT, Fioretos T, Surace C, Lonoce A, Mastrorilli A, Strömbeck B, D'Addabbo P, Iacovelli F, Minervini C, Aventin A, Dastugue N, Fonatsch C, Hagemeijer A, Jotterand M, Mühlematter D, Lafage-Pochitaloff M, Nguyen-Khac F, Schoch C, Slovak ML, Smith A, Solè F, Van Roy N, Johansson B, Rocchi M., Hum Mol Genet 15(6), 2006
PMID: 16452126

The complete chloroplast DNA sequence of the green alga Oltmannsiellopsis viridis reveals a distinctive quadripartite architecture in the chloroplast genome of early diverging ulvophytes.
Pombert JF, Lemieux C, Turmel M., BMC Biol 4(), 2006
PMID: 16472375

The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants.
Turmel M, Otis C, Lemieux C., Mol Biol Evol 23(6), 2006
PMID: 16611644

Characterization of the human lineage-specific pericentric inversion that distinguishes human chromosome 1 from the homologous chromosomes of the great apes.
Szamalek JM, Goidts V, Cooper DN, Hameister H, Kehrer-Sawatzki H., Hum Genet 120(1), 2006
PMID: 16775709

M-GCAT: interactively and efficiently constructing large-scale multiple genome comparison frameworks in closely related species.
Treangen TJ, Messeguer X., BMC Bioinformatics 7(), 2006
PMID: 17022809