Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale.

Steinhoff H, Finger M, Osthege M, Golze C, Schito S, Noack S, Buchs J, Grünberger A (2023)
Biotechnology and Bioengineering 120(5): 1167-1449.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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Steinhoff, HeikoUniBi; Finger, Maurice; Osthege, Michael; Golze, Corinna; Schito, Simone; Noack, Stephan; Buchs, Jochen; Grünberger, AlexanderUniBi
Abstract / Bemerkung
Knowledge about the specific affinity of whole cells towards a substrate, commonly referred to as kS , is a crucial parameter for characterizing growth within bioreactors. State-of-the-art methodologies measure either uptake or consumption rates at different initial substrate concentrations. Alternatively, cell dry weight or respiratory data like online oxygen and carbon dioxide transfer rates can be used to estimate kS . In this work, a recently developed substrate limited microfluidic single-cell cultivation (sl-MSCC) method is applied for the estimation of kS values under defined environmental conditions. This method is benchmarked with two alternative microtiter plate methods, namely high-frequency biomass measurement (HFB) and substrate limited respiratory activity monitoring (sl-RA). As a model system, the substrate affinity kS of Corynebacterium glutamicum ATCC 13032 regarding glucose was investigated assuming a Monod-type growth response. A kS of < 70.7 mg∙L-1 (with 95 % probability) with HFB, 8.55 ± 1.38 mg∙L-1 with sl-RA and 2.66 ± 0.99 mg∙L-1 with sl-MSCC was obtained. Whereas HFB and sl-RA are suitable for a fast initial kS estimation, sl-MSCC allows an affinity estimation by determining tD at concentrations less or equal to the kS value. Thus, sl-MSCC lays the foundation for strain-specific kS estimations under defined environmental conditions with additional insights into cell-to-cell heterogeneity. This article is protected by copyright. All rights reserved.
Stichworte
affinity constant; cell‐to‐cell heterogeneity; Corynebacterium glutamicum; microfluidic single‐cell cultivation; Monod growth kinetics; respiratory activity monitoring
Erscheinungsjahr
2023
Zeitschriftentitel
Biotechnology and Bioengineering
Band
120
Ausgabe
5
Seite(n)
1167-1449
eISSN
1097-0290
Finanzierungs-Informationen
Open-Access-Publikationskosten wurden durch die Universität Bielefeld im Rahmen des DEAL-Vertrags gefördert.
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https://pub.uni-bielefeld.de/record/2968932

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Steinhoff H, Finger M, Osthege M, et al. Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale. Biotechnology and Bioengineering. 2023;120(5):1167-1449.
Steinhoff, H., Finger, M., Osthege, M., Golze, C., Schito, S., Noack, S., Buchs, J., et al. (2023). Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale. Biotechnology and Bioengineering, 120(5), 1167-1449. https://doi.org/10.1002/bit.28345
Steinhoff, Heiko, Finger, Maurice, Osthege, Michael, Golze, Corinna, Schito, Simone, Noack, Stephan, Buchs, Jochen, and Grünberger, Alexander. 2023. “Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale.”. Biotechnology and Bioengineering 120 (5): 1167-1449.
Steinhoff, H., Finger, M., Osthege, M., Golze, C., Schito, S., Noack, S., Buchs, J., and Grünberger, A. (2023). Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale. Biotechnology and Bioengineering 120, 1167-1449.
Steinhoff, H., et al., 2023. Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale. Biotechnology and Bioengineering, 120(5), p 1167-1449.
H. Steinhoff, et al., “Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale.”, Biotechnology and Bioengineering, vol. 120, 2023, pp. 1167-1449.
Steinhoff, H., Finger, M., Osthege, M., Golze, C., Schito, S., Noack, S., Buchs, J., Grünberger, A.: Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale. Biotechnology and Bioengineering. 120, 1167-1449 (2023).
Steinhoff, Heiko, Finger, Maurice, Osthege, Michael, Golze, Corinna, Schito, Simone, Noack, Stephan, Buchs, Jochen, and Grünberger, Alexander. “Experimental ks estimation: A comparison of methods for Corynebacterium glutamicum from lab to microfluidic scale.”. Biotechnology and Bioengineering 120.5 (2023): 1167-1449.
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