Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations
Frommer B, Weisshaar B, Holtgräwe D (2022)
Bielefeld University.
Datenpublikation
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Boerner_BoeRip_chrV1_AnnoV1.gff3
126.12 MB
Boerner_BoeCin_chrV1_AnnoV1.gff3
126.12 MB
Boerner_BoeCin_chrV1.fasta.gz
148.99 MB
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Einrichtung
Abstract / Bemerkung
The haplotype sequences of the grapevine rootstock cultivar ‘Börner’, designated BoeRip and BoeCin, are provided as pseudochromosomes together with their individual gene annotation. The whole diploid assembly was named BoeRC. The data are part of the study and are described in detail in 'A fully phased interspecific Grapevine Rootstock Genome sequence representing the genomes of *Vitis riparia* and *V. cinerea* and allele-aware annotation of the phylloxera resistance locus *Rdv1*.
The "AnnoV2" version of the annotation files include improvements at a small scale.
Stichworte
pseudochromosomes;
haplotype sequences;
haplotype aware gene annotation
Erscheinungsjahr
2022
Copyright und Lizenzen
Page URI
https://pub.uni-bielefeld.de/record/2962793
Zitieren
Frommer B, Weisshaar B, Holtgräwe D. Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University; 2022.
Frommer, B., Weisshaar, B., & Holtgräwe, D. (2022). Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University. https://doi.org/10.4119/unibi/2962793
Frommer, Bianca, Weisshaar, Bernd, and Holtgräwe, Daniela. 2022. Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University.
Frommer, B., Weisshaar, B., and Holtgräwe, D. (2022). Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University.
Frommer, B., Weisshaar, B., & Holtgräwe, D., 2022. Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations, Bielefeld University.
B. Frommer, B. Weisshaar, and D. Holtgräwe, Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations, Bielefeld University, 2022.
Frommer, B., Weisshaar, B., Holtgräwe, D.: Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University (2022).
Frommer, Bianca, Weisshaar, Bernd, and Holtgräwe, Daniela. Chromosome-scale haplotype genome sequence assemblies of ‘Börner’ and corresponding genome sequence annotations. Bielefeld University, 2022.
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Boerner_BoeRip_chrV1_AnnoV1.gff3
126.12 MB
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Open Access
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2022-05-06T16:18:12Z
MD5 Prüfsumme
302148fd7594ac3fb46766eb9ea2bb49
Name
Boerner_BoeCin_chrV1_AnnoV1.gff3
126.12 MB
Access Level
Open Access
Zuletzt Hochgeladen
2022-05-06T16:18:12Z
MD5 Prüfsumme
5438cdbae09ca31fbe997ee2ecb27cff
Name
Boerner_BoeCin_chrV1.fasta.gz
148.99 MB
Access Level
Open Access
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2022-05-06T16:18:15Z
MD5 Prüfsumme
3673c3e48439550578e5986dae5e5499
Name
Boerner_BoeCin_chrV1.fasta
510.00 MB
Access Level
Open Access
Zuletzt Hochgeladen
2022-05-06T16:18:23Z
MD5 Prüfsumme
cb0c26556b1bdd9e787e4241bc63f139
Name
Boerner_BoeRip_chrV1.fasta.gz
147.14 MB
Access Level
Open Access
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2022-05-06T16:18:19Z
MD5 Prüfsumme
9b17136ed0620a860983d7b61bccd172
Name
Boerner_BoeRip_chrV1.fasta
504.24 MB
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Open Access
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2022-05-06T16:18:29Z
MD5 Prüfsumme
9a9780ddc58d7d8895a9c8972c496f82
Name
Boerner_BoeCin_chrV1_AnnoV2.gff3
126.12 MB
Access Level
Open Access
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2024-07-31T14:34:03Z
MD5 Prüfsumme
a90e2972dc556dc99b87eff0de00cb64
Name
Boerner_BoeRip_chrV1_AnnoV2.gff3
126.12 MB
Access Level
Open Access
Zuletzt Hochgeladen
2024-07-31T14:38:10Z
MD5 Prüfsumme
21271857b31e3df22df1b165048e176a
Material in PUB:
Teil von PUB Eintrag
A fully phased interspecific grapevine rootstock genome sequence representing *V. riparia* and *V. cinerea* and allele-aware annotation of the phylloxera resistance locus *Rdv1*
Frommer B, Hausmann L, Holtgräwe D, Viehöver P, Hüttel B, Reinhard R, Töpfer R, Weisshaar B (2022)
bioRxiv.
Frommer B, Hausmann L, Holtgräwe D, Viehöver P, Hüttel B, Reinhard R, Töpfer R, Weisshaar B (2022)
bioRxiv.
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