Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability

Kampf J, Gerwig J, Kruse K, Cleverley R, Dormeyer M, Grünberger A, Kohlheyer D, Commichau FM, Lewis RJ, Stuelke J (2018)
mBio 9(5): e01464-18.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
DOI
Autor*in
Kampf, Jan; Gerwig, Jan; Kruse, Kerstin; Cleverley, Robert; Dormeyer, Miriam; Grünberger, AlexanderUniBi; Kohlheyer, Dietrich; Commichau, Fabian M.; Lewis, Richard J.; Stuelke, Joerg
Einrichtung
Technische Fakultät > AG Multiscale Bioengineering
Erscheinungsjahr
2018
Zeitschriftentitel
mBio
Band
9
Ausgabe
5
Art.-Nr.
e01464-18
Urheberrecht / Lizenzen
Creative Commons Namensnennung 4.0 International Public License (CC-BY 4.0)
ISSN
2150-7511
eISSN
2150-7511
Page URI
https://pub.uni-bielefeld.de/record/2932416

Zitieren

Kampf J, Gerwig J, Kruse K, et al. Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability. mBio. 2018;9(5): e01464-18.
Kampf, J., Gerwig, J., Kruse, K., Cleverley, R., Dormeyer, M., Grünberger, A., Kohlheyer, D., et al. (2018). Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability. mBio, 9(5), e01464-18. doi:10.1128/mBio.01464-18
Kampf, Jan, Gerwig, Jan, Kruse, Kerstin, Cleverley, Robert, Dormeyer, Miriam, Grünberger, Alexander, Kohlheyer, Dietrich, Commichau, Fabian M., Lewis, Richard J., and Stuelke, Joerg. 2018. “Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability”. mBio 9 (5): e01464-18.
Kampf, J., Gerwig, J., Kruse, K., Cleverley, R., Dormeyer, M., Grünberger, A., Kohlheyer, D., Commichau, F. M., Lewis, R. J., and Stuelke, J. (2018). Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability. mBio 9:e01464-18.
Kampf, J., et al., 2018. Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability. mBio, 9(5): e01464-18.
J. Kampf, et al., “Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability”, mBio, vol. 9, 2018, : e01464-18.
Kampf, J., Gerwig, J., Kruse, K., Cleverley, R., Dormeyer, M., Grünberger, A., Kohlheyer, D., Commichau, F.M., Lewis, R.J., Stuelke, J.: Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability. mBio. 9, : e01464-18 (2018).
Kampf, Jan, Gerwig, Jan, Kruse, Kerstin, Cleverley, Robert, Dormeyer, Miriam, Grünberger, Alexander, Kohlheyer, Dietrich, Commichau, Fabian M., Lewis, Richard J., and Stuelke, Joerg. “Selective Pressure for Biofilm Formation in Bacillus subtilis: Differential Effect of Mutations in the Master Regulator SinR on Bistability”. mBio 9.5 (2018): e01464-18.

1 Zitation in Europe PMC

Daten bereitgestellt von Europe PubMed Central.

Bacillus subtilis Biofilms: a Matter of Individual Choice.
Ryan-Payseur BK, Freitag NE., MBio 9(6), 2018
PMID: 30482826

44 References

Daten bereitgestellt von Europe PubMed Central.

Genome evolution and adaptation in a long-term experiment with Escherichia coli.
Barrick JE, Yu DS, Yoon SH, Jeong H, Oh TK, Schneider D, Lenski RE, Kim JF., Nature 461(7268), 2009
PMID: 19838166
Glutamate metabolism in Bacillus subtilis: gene expression and enzyme activities evolved to avoid futile cycles and to allow rapid responses to perturbations of the system.
Commichau FM, Gunka K, Landmann JJ, Stulke J., J. Bacteriol. 190(10), 2008
PMID: 18326565
Selection-driven accumulation of suppressor mutants in bacillus subtilis: the apparent high mutation frequency of the cryptic gudB gene and the rapid clonal expansion of gudB(+) suppressors are due to growth under selection.
Gunka K, Stannek L, Care RA, Commichau FM., PLoS ONE 8(6), 2013
PMID: 23785476
Mutational activation of the RocR activator and of a cryptic rocDEF promoter bypass loss of the initial steps of proline biosynthesis in Bacillus subtilis.
Zaprasis A, Hoffmann T, Wunsche G, Florez LA, Stulke J, Bremer E., Environ. Microbiol. 16(3), 2013
PMID: 23869754
Hierarchical mutational events compensate for glutamate auxotrophy of a Bacillus subtilis gltC mutant.
Dormeyer M, Lubke AL, Muller P, Lentes S, Reuß DR, Thurmer A, Stulke J, Daniel R, Brantl S, Commichau FM., Environ Microbiol Rep 9(3), 2017
PMID: 28294562
Adaptation of Bacillus subtilis to Life at Extreme Potassium Limitation.
Gundlach J, Herzberg C, Hertel D, Thurmer A, Daniel R, Link H, Stulke J., MBio 8(4), 2017
PMID: 28679749
A two-step evolutionary process establishes a non-native vitamin B6 pathway in Bacillus subtilis.
Rosenberg J, Yeak KC, Commichau FM., Environ. Microbiol. 20(1), 2017
PMID: 29027347
Bistability, epigenetics, and bet-hedging in bacteria.
Veening JW, Smits WK, Kuipers OP., Annu. Rev. Microbiol. 62(), 2008
PMID: 18537474
An epigenetic switch governing daughter cell separation in Bacillus subtilis.
Chai Y, Norman T, Kolter R, Losick R., Genes Dev. 24(8), 2010
PMID: 20351052
Bistability in bacteria.
Dubnau D, Losick R., Mol. Microbiol. 61(3), 2006
PMID: 16879639
A master regulator for biofilm formation by Bacillus subtilis.
Kearns DB, Chu F, Branda SS, Kolter R, Losick R., Mol. Microbiol. 55(3), 2005
PMID: 15661000
Structure and organisation of SinR, the master regulator of biofilm formation in Bacillus subtilis.
Colledge VL, Fogg MJ, Levdikov VM, Leech A, Dodson EJ, Wilkinson AJ., J. Mol. Biol. 411(3), 2011
PMID: 21708175
Molecular basis of the activity of SinR protein, the master regulator of biofilm formation in Bacillus subtilis.
Newman JA, Rodrigues C, Lewis RJ., J. Biol. Chem. 288(15), 2013
PMID: 23430750
Sticking together: building a biofilm the Bacillus subtilis way.
Vlamakis H, Chai Y, Beauregard P, Losick R, Kolter R., Nat. Rev. Microbiol. 11(3), 2013
PMID: 23353768
Biofilm formation by Bacillus subtilis: new insights into regulatory strategies and assembly mechanisms.
Cairns LS, Hobley L, Stanley-Wall NR., Mol. Microbiol. 93(4), 2014
PMID: 24988880
An evolutionary link between sporulation and prophage induction in the structure of a repressor:anti-repressor complex.
Lewis RJ, Brannigan JA, Offen WA, Smith I, Wilkinson AJ., J. Mol. Biol. 283(5), 1998
PMID: 9799632
Bistability and biofilm formation in Bacillus subtilis.
Chai Y, Chu F, Kolter R, Losick R., Mol. Microbiol. 67(2), 2007
PMID: 18047568
Postexponential regulation of sin operon expression in Bacillus subtilis.
Shafikhani SH, Mandic-Mulec I, Strauch MA, Smith I, Leighton T., J. Bacteriol. 184(2), 2002
PMID: 11751836
A molecular clutch disables flagella in the Bacillus subtilis biofilm.
Blair KM, Turner L, Winkelman JT, Berg HC, Kearns DB., Science 320(5883), 2008
PMID: 18566286
A novel factor controlling bistability in Bacillus subtilis: the YmdB protein affects flagellin expression and biofilm formation.
Diethmaier C, Pietack N, Gunka K, Wrede C, Lehnik-Habrink M, Herzberg C, Hubner S, Stulke J., J. Bacteriol. 193(21), 2011
PMID: 21856853
The YmdB phosphodiesterase is a global regulator of late adaptive responses in Bacillus subtilis.
Diethmaier C, Newman JA, Kovacs AT, Kaever V, Herzberg C, Rodrigues C, Boonstra M, Kuipers OP, Lewis RJ, Stulke J., J. Bacteriol. 196(2), 2013
PMID: 24163345
High-Throughput Genetic Screens Identify a Large and Diverse Collection of New Sporulation Genes in Bacillus subtilis.
Meeske AJ, Rodrigues CD, Brady J, Lim HC, Bernhardt TG, Rudner DZ., PLoS Biol. 14(1), 2016
PMID: 26735940
Early Developmental Program Shapes Colony Morphology in Bacteria.
Mamou G, Malli Mohan GB, Rouvinski A, Rosenberg A, Ben-Yehuda S., Cell Rep 14(8), 2016
PMID: 26904951
Architecture and Characteristics of Bacterial Nanotubes.
Dubey GP, Malli Mohan GB, Dubrovsky A, Amen T, Tsipshtein S, Rouvinski A, Rosenberg A, Kaganovich D, Sherman E, Medalia O, Ben-Yehuda S., Dev. Cell 36(4), 2016
PMID: 26906740
Interspecies nutrient extraction and toxin delivery between bacteria.
Stempler O, Baidya AK, Bhattacharya S, Malli Mohan GB, Tzipilevich E, Sinai L, Mamou G, Ben-Yehuda S., Nat Commun 8(1), 2017
PMID: 28827522
The origins of 168, W23, and other Bacillus subtilis legacy strains.
Zeigler DR, Pragai Z, Rodriguez S, Chevreux B, Muffler A, Albert T, Bai R, Wyss M, Perkins JB., J. Bacteriol. 190(21), 2008
PMID: 18723616
Tracing the domestication of a biofilm-forming bacterium.
McLoon AL, Guttenplan SB, Kearns DB, Kolter R, Losick R., J. Bacteriol. 193(8), 2011
PMID: 21278284
SinR is a mutational target for fine-tuning biofilm formation in laboratory-evolved strains of Bacillus subtilis.
Leiman SA, Arboleda LC, Spina JS, McLoon AL., BMC Microbiol. 14(), 2014
PMID: 25433524
ThrR, a DNA-binding transcription factor involved in controlling threonine biosynthesis in Bacillus subtilis.
Rosenberg J, Muller P, Lentes S, Thiele MJ, Zeigler DR, Todter D, Paulus H, Brantl S, Stulke J, Commichau FM., Mol. Microbiol. 101(5), 2016
PMID: 27260660
RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y.
Lehnik-Habrink M, Schaffer M, Mader U, Diethmaier C, Herzberg C, Stulke J., Mol. Microbiol. 81(6), 2011
PMID: 21815947
Biofilm formation by Bacillus subtilis requires an endoribonuclease-containing multisubunit complex that controls mRNA levels for the matrix gene repressor SinR.
DeLoughery A, Dengler V, Chai Y, Losick R., Mol. Microbiol. 99(2), 2015
PMID: 26434553
A protein complex supports the production of Spo0A-P and plays additional roles for biofilms and the K-state in Bacillus subtilis.
Dubnau EJ, Carabetta VJ, Tanner AW, Miras M, Diethmaier C, Dubnau D., Mol. Microbiol. 101(4), 2016
PMID: 27501195

Sambrook J, Fritsch EF, Maniatis T., 1989
A high-frequency mutation in Bacillus subtilis: requirements for the decryptification of the gudB glutamate dehydrogenase gene.
Gunka K, Tholen S, Gerwig J, Herzberg C, Stulke J, Commichau FM., J. Bacteriol. 194(5), 2011
PMID: 22178973
Salt stress is an environmental signal affecting degradative enzyme synthesis in Bacillus subtilis.
Kunst F, Rapoport G., J. Bacteriol. 177(9), 1995
PMID: 7730271
PCR-synthesis of marker cassettes with long flanking homology regions for gene disruptions in S. cerevisiae.
Wach A., Yeast 12(3), 1996
PMID: 8904338
Antibiotic-resistance cassettes for Bacillus subtilis.
Guerout-Fleury AM, Shazand K, Frandsen N, Stragier P., Gene 167(1-2), 1995
PMID: 8566804
Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon.
Meinken C, Blencke HM, Ludwig H, Stulke J., Microbiology (Reading, Engl.) 149(Pt 3), 2003
PMID: 12634343
Fruiting body formation by Bacillus subtilis.
Branda SS, Gonzalez-Pastor JE, Ben-Yehuda S, Losick R, Kolter R., Proc. Natl. Acad. Sci. U.S.A. 98(20), 2001
PMID: 11572999
Microfluidic picoliter bioreactor for microbial single-cell analysis: fabrication, system setup, and operation.
Gruenberger A, Probst C, Heyer A, Wiechert W, Frunzke J, Kohlheyer D., J Vis Exp (82), 2013
PMID: 24336165
Light-responsive control of bacterial gene expression: precise triggering of the lac promoter activity using photocaged IPTG.
Binder D, Grunberger A, Loeschcke A, Probst C, Bier C, Pietruszka J, Wiechert W, Kohlheyer D, Jaeger KE, Drepper T., Integr Biol (Camb) 6(8), 2014
PMID: 24894989
Spatiotemporal microbial single-cell analysis using a high-throughput microfluidics cultivation platform.
Grunberger A, Probst C, Helfrich S, Nanda A, Stute B, Wiechert W, von Lieres E, Noh K, Frunzke J, Kohlheyer D., Cytometry A 87(12), 2015
PMID: 26348020
Rapid inoculation of single bacteria into parallel picoliter fermentation chambers
Probst C, Grünberger A, Braun N, Helfrich S, Nöh K, Wiechert W, Kohlheyer D., 2015
MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis.
Ducret A, Quardokus EM, Brun YV., Nat Microbiol 1(7), 2016
PMID: 27572972
Export

Markieren/ Markierung löschen
Markierte Publikationen

Open Data PUB

Web of Science

Dieser Datensatz im Web of Science®
Quellen

PMID: 30181249
PubMed | Europe PMC

Suchen in

Google Scholar