Fermentative production of L-pipecolic acid from glucose and alternative carbon sources

Perez F, Risse JM, Friehs K, Wendisch VF (2017)
Biotechnology Journal 12(7): 1600646.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
 
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DOI
Autor*in
Perez, FernandoUniBi; Risse, Joe MaxUniBi ; Friehs, KarlUniBi; Wendisch, Volker F.UniBi
Einrichtung
Centrum für Biotechnologie > Arbeitsgruppe V. Wendisch
Centrum für Biotechnologie > Graduate Center > Graduate Cluster Industrial Biotechnology
Fakultät für Biologie > Genetik der Prokaryoten
Erscheinungsjahr
2017
Zeitschriftentitel
Biotechnology Journal
Band
12
Ausgabe
7
Art.-Nr.
1600646
ISSN
1860-6768
eISSN
1860-7314
Page URI
https://pub.uni-bielefeld.de/record/2908307

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Perez F, Risse JM, Friehs K, Wendisch VF. Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal. 2017;12(7): 1600646.
Perez, F., Risse, J. M., Friehs, K., & Wendisch, V. F. (2017). Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal, 12(7), 1600646. doi:10.1002/biot.201600646
Perez, Fernando, Risse, Joe Max, Friehs, Karl, and Wendisch, Volker F. 2017. “Fermentative production of L-pipecolic acid from glucose and alternative carbon sources”. Biotechnology Journal 12 (7): 1600646.
Perez, F., Risse, J. M., Friehs, K., and Wendisch, V. F. (2017). Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal 12:1600646.
Perez, F., et al., 2017. Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal, 12(7): 1600646.
F. Perez, et al., “Fermentative production of L-pipecolic acid from glucose and alternative carbon sources”, Biotechnology Journal, vol. 12, 2017, : 1600646.
Perez, F., Risse, J.M., Friehs, K., Wendisch, V.F.: Fermentative production of L-pipecolic acid from glucose and alternative carbon sources. Biotechnology Journal. 12, : 1600646 (2017).
Perez, Fernando, Risse, Joe Max, Friehs, Karl, and Wendisch, Volker F. “Fermentative production of L-pipecolic acid from glucose and alternative carbon sources”. Biotechnology Journal 12.7 (2017): 1600646.

82 References

Daten bereitgestellt von Europe PubMed Central.

Biotransformation of L-lysine to L-pipecolic acid catalyzed by L-lysine 6-aminotransferase and pyrroline-5-carboxylate reductase.
Fujii T, Mukaihara M, Agematu H, Tsunekawa H., Biosci. Biotechnol. Biochem. 66(3), 2002
PMID: 12005058
Pipecolic acid in microbes: biosynthetic routes and enzymes.
He M., J. Ind. Microbiol. Biotechnol. 33(6), 2006
PMID: 16418868
Significance of the natural occurrence of L- versus D-pipecolic acid: a review.
Vranova V, Lojkova L, Rejsek K, Formanek P., Chirality 25(12), 2013
PMID: 24114978
Pipecolic Acid Orchestrates Plant Systemic Acquired Resistance and Defense Priming via Salicylic Acid-Dependent and -Independent Pathways.
Bernsdorff F, Doring AC, Gruner K, Schuck S, Brautigam A, Zeier J., Plant Cell 28(1), 2015
PMID: 26672068
Pipecolic acid, an endogenous mediator of defense amplification and priming, is a critical regulator of inducible plant immunity.
Navarova H, Bernsdorff F, Doring AC, Zeier J., Plant Cell 24(12), 2012
PMID: 23221596
Mutational biosynthesis of novel rapamycins by a strain of Streptomyces hygroscopicus NRRL 5491 disrupted in rapL, encoding a putative lysine cyclodeaminase.
Khaw LE, Bohm GA, Metcalfe S, Staunton J, Leadlay PF., J. Bacteriol. 180(4), 1998
PMID: 9473033
Biosynthesis of the immunosuppressant immunomycin: the enzymology of pipecolate incorporation.
Nielsen JB, Hsu MJ, Byrne KM, Kaplan L., Biochemistry 30(23), 1991
PMID: 2043618
Asymmetric syntheses of pipecolic acid and derivatives.
Couty F., Amino Acids 16(3-4), 1999
PMID: 10399018
Biochemical characterisation of recombinant Streptomyces pristinaespiralis L-lysine cyclodeaminase.
Tsotsou GE, Barbirato F., Biochimie 89(5), 2007
PMID: 17291665
Heterologous production of L-pipecolic acid in Corynebacterium glutamicum
Wagner, J. Biotechnol. 150(), 2010
Metabolism of basic amino acids in Pseudomonas putida. Catabolism of lysine by cyclic and acyclic intermediates.
Miller DL, Rodwell VW., J. Biol. Chem. 246(9), 1971
PMID: 5554291
Properties of L-lysine epsilon-dehydrogenase from Agrobacterium tumefaciens.
Misono H, Hashimoto H, Uehigashi H, Nagata S, Nagasaki S., J. Biochem. 105(6), 1989
PMID: 2768207
Genome-wide analysis of lysine catabolism in bacteria reveals new connections with osmotic stress resistance.
Neshich IA, Kiyota E, Arruda P., ISME J 7(12), 2013
PMID: 23887172
Pipecolic acid biosynthesis in Rhizoctonia leguminicola. I. The lysine saccharopine, delta 1-piperideine-6-carboxylic acid pathway.
Wickwire BM, Harris CM, Harris TM, Broquist HP., J. Biol. Chem. 265(25), 1990
PMID: 2118517
Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid.
Perez-Garcia F, Peters-Wendisch P, Wendisch VF., Appl. Microbiol. Biotechnol. 100(18), 2016
PMID: 27345060
Updates on industrial production of amino acids using Corynebacterium glutamicum.
Wendisch VF, Jorge JMP, Perez-Garcia F, Sgobba E., World J. Microbiol. Biotechnol. 32(6), 2016
PMID: 27116971
Recent advances in amino acid production by microbial cells.
Hirasawa T, Shimizu H., Curr. Opin. Biotechnol. 42(), 2016
PMID: 27151315
Current topics in the biotechnological production of essential amino acids, functional amino acids, and dipeptides.
Mitsuhashi S., Curr. Opin. Biotechnol. 26(), 2013
PMID: 24679256
Environmentally directed mutations and their impact on industrial biotransformation and fermentation processes.
Zelder O, Hauer B., Curr. Opin. Microbiol. 3(3), 2000
PMID: 10851161
A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level.
Binder S, Schendzielorz G, Stabler N, Krumbach K, Hoffmann K, Bott M, Eggeling L., Genome Biol. 13(5), 2012
PMID: 22640862
Recombineering in Corynebacterium glutamicum combined with optical nanosensors: a general strategy for fast producer strain generation.
Binder S, Siedler S, Marienhagen J, Bott M, Eggeling L., Nucleic Acids Res. 41(12), 2013
PMID: 23630315
Advanced biotechnology: metabolically engineered cells for the bio-based production of chemicals and fuels, materials, and health-care products.
Becker J, Wittmann C., Angew. Chem. Int. Ed. Engl. 54(11), 2015
PMID: 25684732
Systems biology for industrial strains and fermentation processes--example: amino acids.
Takors R, Bathe B, Rieping M, Hans S, Kelle R, Huthmacher K., J. Biotechnol. 129(2), 2007
PMID: 17367886
A genome-based approach to create a minimally mutated Corynebacterium glutamicum strain for efficient L-lysine production.
Ikeda M, Ohnishi J, Hayashi M, Mitsuhashi S., J. Ind. Microbiol. Biotechnol. 33(7), 2006
PMID: 16506038
Chassis organism from Corynebacterium glutamicum--a top-down approach to identify and delete irrelevant gene clusters.
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Bruhl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, Kramer R, Seibold G, Frunzke J, Kalinowski J, Ruckert C, Wendisch VF, Noack S., Biotechnol J 10(2), 2014
PMID: 25139579
Corynebacterium glutamicum Metabolic Engineering with CRISPR Interference (CRISPRi).
Cleto S, Jensen JV, Wendisch VF, Lu TK., ACS Synth Biol 5(5), 2016
PMID: 26829286
Carbohydrate metabolism in Corynebacterium glutamicum and applications for the metabolic engineering of L-lysine production strains.
Blombach B, Seibold GM., Appl. Microbiol. Biotechnol. 86(5), 2010
PMID: 20333512
Corynebacteria: Genomics and Molecular Biology
Burkovski, Horizon Scientific Press (), 2008
Identification and characterization of a bacterial transport system for the uptake of pyruvate, propionate, and acetate in Corynebacterium glutamicum.
Jolkver E, Emer D, Ballan S, Kramer R, Eikmanns BJ, Marin K., J. Bacteriol. 191(3), 2008
PMID: 19028892
Pyruvate carboxylase from Corynebacterium glutamicum: characterization, expression and inactivation of the pyc gene.
Peters-Wendisch PG, Kreutzer C, Kalinowski J, Patek M, Sahm H, Eikmanns BJ., Microbiology (Reading, Engl.) 144 ( Pt 4)(), 1998
PMID: 9579065
Identification of mannose uptake and catabolism genes in Corynebacterium glutamicum and genetic engineering for simultaneous utilization of mannose and glucose.
Sasaki M, Teramoto H, Inui M, Yukawa H., Appl. Microbiol. Biotechnol. 89(6), 2010
PMID: 21125267
Amino acid production from rice straw and wheat bran hydrolysates by recombinant pentose-utilizing Corynebacterium glutamicum.
Gopinath V, Meiswinkel TM, Wendisch VF, Nampoothiri KM., Appl. Microbiol. Biotechnol. 92(5), 2011
PMID: 21796382
Engineering of Corynebacterium glutamicum for growth and L-lysine and lycopene production from N-acetyl-glucosamine.
Matano C, Uhde A, Youn JW, Maeda T, Clermont L, Marin K, Kramer R, Wendisch VF, Seibold GM., Appl. Microbiol. Biotechnol. 98(12), 2014
PMID: 24668244
Engineering of a glycerol utilization pathway for amino acid production by Corynebacterium glutamicum.
Rittmann D, Lindner SN, Wendisch VF., Appl. Environ. Microbiol. 74(20), 2008
PMID: 18757581
Production of the amino acids l-glutamate, l-lysine, l-ornithine and l-arginine from arabinose by recombinant Corynebacterium glutamicum.
Schneider J, Niermann K, Wendisch VF., J. Biotechnol. 154(2-3), 2010
PMID: 20638422
Utilization of soluble starch by a recombinant Corynebacterium glutamicum strain: growth and lysine production.
Seibold G, Auchter M, Berens S, Kalinowski J, Eikmanns BJ., J. Biotechnol. 124(2), 2006
PMID: 16488498
Glucosamine as carbon source for amino acid-producing Corynebacterium glutamicum.
Uhde A, Youn JW, Maeda T, Clermont L, Matano C, Kramer R, Wendisch VF, Seibold GM, Marin K., Appl. Microbiol. Biotechnol. 97(4), 2012
PMID: 22854894
Direct production of organic acids from starch by cell surface-engineered Corynebacterium glutamicum in anaerobic conditions.
Tsuge Y, Tateno T, Sasaki K, Hasunuma T, Tanaka T, Kondo A., AMB Express 3(1), 2013
PMID: 24342107
Engineering microbial cell factories: Metabolic engineering of Corynebacterium glutamicum with a focus on non-natural products.
Heider SA, Wendisch VF., Biotechnol J 10(8), 2015
PMID: 26216246
Microbial production of amino acids and derived chemicals: synthetic biology approaches to strain development.
Wendisch VF., Curr. Opin. Biotechnol. 30(), 2014
PMID: 24922334
From zero to hero - production of bio-based nylon from renewable resources using engineered Corynebacterium glutamicum.
Kind S, Neubauer S, Becker J, Yamamoto M, Volkert M, Abendroth Gv, Zelder O, Wittmann C., Metab. Eng. 25(), 2014
PMID: 24831706

AUTHOR UNKNOWN, 0
Construction of Synthetic Promoter-Based Expression Cassettes for the Production of Cadaverine in Recombinant Corynebacterium glutamicum.
Oh YH, Choi JW, Kim EY, Song BK, Jeong KJ, Park K, Kim IK, Woo HM, Lee SH, Park SJ., Appl. Biochem. Biotechnol. 176(7), 2015
PMID: 26047931
Systems metabolic engineering for the production of bio-nylon precursor.
Shimizu H., Biotechnol J 8(5), 2013
PMID: 23589452
Metabolic engineering of Escherichia coli for the production of 5-aminovalerate and glutarate as C5 platform chemicals.
Park SJ, Kim EY, Noh W, Park HM, Oh YH, Lee SH, Song BK, Jegal J, Lee SY., Metab. Eng. 16(), 2012
PMID: 23246520
Systems metabolic engineering of Corynebacterium glutamicum for the production of the carbon-5 platform chemicals 5-aminovalerate and glutarate.
Rohles CM, Gießelmann G, Kohlstedt M, Wittmann C, Becker J., Microb. Cell Fact. 15(1), 2016
PMID: 27618862
Studies on transformation of Escherichia coli with plasmids.
Hanahan D., J. Mol. Biol. 166(4), 1983
PMID: 6345791

Eggeling, 2005
Pyruvate carboxylase is a major bottleneck for glutamate and lysine production by Corynebacterium glutamicum.
Peters-Wendisch PG, Schiel B, Wendisch VF, Katsoulidis E, Mockel B, Sahm H, Eikmanns BJ., J. Mol. Microbiol. Biotechnol. 3(2), 2001
PMID: 11321586
Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production.
Stansen C, Uy D, Delaunay S, Eggeling L, Goergen JL, Wendisch VF., Appl. Environ. Microbiol. 71(10), 2005
PMID: 16204505
Tools for genetic engineering in the amino acid-producing bacterium Corynebacterium glutamicum.
Kirchner O, Tauch A., J. Biotechnol. 104(1-3), 2003
PMID: 12948646

Sambrook, 1989
Enzymatic assembly of overlapping DNA fragments.
Gibson DG., Meth. Enzymol. 498(), 2011
PMID: 21601685
Fructose-1,6-bisphosphatase from Corynebacterium glutamicum: expression and deletion of the fbp gene and biochemical characterization of the enzyme.
Rittmann D, Schaffer S, Wendisch VF, Sahm H., Arch. Microbiol. 180(4), 2003
PMID: 12904832
A new type of transporter with a new type of cellular function: L-lysine export from Corynebacterium glutamicum.
Vrljic M, Sahm H, Eggeling L., Mol. Microbiol. 22(5), 1996
PMID: 8971704
The DeoR-type regulator SugR represses expression of ptsG in Corynebacterium glutamicum.
Engels V, Wendisch VF., J. Bacteriol. 189(8), 2007
PMID: 17293426
Transcriptome and Multivariable Data Analysis of Corynebacterium glutamicum under Different Dissolved Oxygen Conditions in Bioreactors.
Sun Y, Guo W, Wang F, Peng F, Yang Y, Dai X, Liu X, Bai Z., PLoS ONE 11(12), 2016
PMID: 27907077
Sampling for metabolome analysis of microorganisms.
Bolten CJ, Kiefer P, Letisse F, Portais JC, Wittmann C., Anal. Chem. 79(10), 2007
PMID: 17411014
Putrescine production by engineered Corynebacterium glutamicum.
Schneider J, Wendisch VF., Appl. Microbiol. Biotechnol. 88(4), 2010
PMID: 20661733
Engineering biotin prototrophic Corynebacterium glutamicum strains for amino acid, diamine and carotenoid production.
Peters-Wendisch P, Gotker S, Heider SA, Komati Reddy G, Nguyen AQ, Stansen KC, Wendisch VF., J. Biotechnol. 192 Pt B(), 2014
PMID: 24486440
From zero to hero--design-based systems metabolic engineering of Corynebacterium glutamicum for L-lysine production.
Becker J, Zelder O, Hafner S, Schroder H, Wittmann C., Metab. Eng. 13(2), 2011
PMID: 21241816
Thick juice-based production of amino acids and putrescine by Corynebacterium glutamicum
Meiswinkel, J. Biotechnol. Biomater. 04(), 2014
Roles of export genes cgmA and lysE for the production of L-arginine and L-citrulline by Corynebacterium glutamicum.
Lubitz D, Jorge JM, Perez-Garcia F, Taniguchi H, Wendisch VF., Appl. Microbiol. Biotechnol. 100(19), 2016
PMID: 27350619
Production of the Marine Carotenoid Astaxanthin by Metabolically Engineered Corynebacterium glutamicum.
Henke NA, Heider SA, Peters-Wendisch P, Wendisch VF., Mar Drugs 14(7), 2016
PMID: 27376307
Crude glycerol-based production of amino acids and putrescine by Corynebacterium glutamicum.
Meiswinkel TM, Rittmann D, Lindner SN, Wendisch VF., Bioresour. Technol. 145(), 2013
PMID: 23562176
Accelerated pentose utilization by Corynebacterium glutamicum for accelerated production of lysine, glutamate, ornithine and putrescine.
Meiswinkel TM, Gopinath V, Lindner SN, Nampoothiri KM, Wendisch VF., Microb Biotechnol 6(2), 2012
PMID: 23164409
Engineering Escherichia coli for renewable production of the 5-carbon polyamide building-blocks 5-aminovalerate and glutarate.
Adkins J, Jordan J, Nielsen DR., Biotechnol. Bioeng. 110(6), 2013
PMID: 23296991
Enhanced conversion of L-lysine to L-pipecolic acid using a recombinant Escherichia coli containing lysine cyclodeaminase as whole-cell biocatalyst
Ying, J. Mol. Catal. B Enzym. 117(), 2015
Molecular evolution of the lysine biosynthetic pathways.
Velasco AM, Leguina JI, Lazcano A., J. Mol. Evol. 55(4), 2002
PMID: 12355264
Systems metabolic engineering of Corynebacterium glutamicum for production of the chemical chaperone ectoine.
Becker J, Schafer R, Kohlstedt M, Harder BJ, Borchert NS, Stoveken N, Bremer E, Wittmann C., Microb. Cell Fact. 12(), 2013
PMID: 24228689
Improved fermentative production of gamma-aminobutyric acid via the putrescine route: Systems metabolic engineering for production from glucose, amino sugars, and xylose.
Jorge JM, Nguyen AQ, Perez-Garcia F, Kind S, Wendisch VF., Biotechnol. Bioeng. 114(4), 2016
PMID: 27800627
Corynebacterium glutamicum is equipped with four secondary carriers for compatible solutes: identification, sequencing, and characterization of the proline/ectoine uptake system, ProP, and the ectoine/proline/glycine betaine carrier, EctP.
Peter H, Weil B, Burkovski A, Kramer R, Morbach S., J. Bacteriol. 180(22), 1998
PMID: 9811661
Characterization of compatible solute transporter multiplicity in Corynebacterium glutamicum.
Weinand M, Kramer R, Morbach S., Appl. Microbiol. Biotechnol. 76(3), 2007
PMID: 17390131
Optimization of the IPP Precursor Supply for the Production of Lycopene, Decaprenoxanthin and Astaxanthin by Corynebacterium glutamicum.
Heider SA, Wolf N, Hofemeier A, Peters-Wendisch P, Wendisch VF., Front Bioeng Biotechnol 2(), 2014
PMID: 25191655
Engineering Corynebacterium glutamicum for the production of 2,3-butanediol.
Rados D, Carvalho AL, Wieschalka S, Neves AR, Blombach B, Eikmanns BJ, Santos H., Microb. Cell Fact. 14(), 2015
PMID: 26511723
The tac promoter: a functional hybrid derived from the trp and lac promoters.
de Boer HA, Comstock LJ, Vasser M., Proc. Natl. Acad. Sci. U.S.A. 80(1), 1983
PMID: 6337371
Design and testing of a synthetic biology framework for genetic engineering of Corynebacterium glutamicum.
Ravasi P, Peiru S, Gramajo H, Menzella HG., Microb. Cell Fact. 11(), 2012
PMID: 23134565
Enantioselective syntheses of 2-alkyl- and 2,6-dialkylpiperidine alkaloids: preparations of the hydrochlorides of (-)-coniine, (-)-solenopsin A, and (-)-dihydropinidine.
Wilkinson TJ, Stehle NW, Beak P., Org. Lett. 2(2), 2000
PMID: 10814270
Preparation of (S)-piperazine-2-carboxylic acid, (R)-piperazine-2-carboxylic acid, and (S)-piperidine-2-carboxylic acid by kinetic resolution of the corresponding racemic carboxamides with stereoselective amidases in whole bacterial cells
Eichhorn, Tetrahedron Asymmetry 8(), 1997
Biosynthesis of pipecolic acid by RapL, a lysine cyclodeaminase encoded in the rapamycin gene cluster.
Gatto GJ Jr, Boyne MT 2nd, Kelleher NL, Walsh CT., J. Am. Chem. Soc. 128(11), 2006
PMID: 16536560
Enzymatic synthesis of L-pipecolic acid by Delta1-piperideine-2-carboxylate reductase from Pseudomonas putida.
Muramatsu H, Mihara H, Yasuda M, Ueda M, Kurihara T, Esaki N., Biosci. Biotechnol. Biochem. 70(9), 2006
PMID: 16960365
L-citrulline production by metabolically engineered Corynebacterium glutamicum from glucose and alternative carbon sources.
Eberhardt D, Jensen JV, Wendisch VF., AMB Express 4(1), 2014
PMID: 26267114
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Teil dieser Dissertation
Engineering Corynebacterium glutamicum for a fast production of L-lysine and L-lysine-derived compounds
Perez F (2017)
Bielefeld.
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