Nonlinear Dimensionality Reduction by Locally Linear Embedding

Roweis ST, Lawrence LK (2000)
Science 290(5500): 2323-2326.

Zeitschriftenaufsatz | Veröffentlicht | Englisch
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Roweis, S. T.; Lawrence, L. K.
Abstract / Bemerkung
Many areas of science depend on exploratory data analysis and visualization. The need to analyze large amounts of multivariate data raises the fundamental problem of dimensionality reduction: how to discover compact representations of high-dimensional data. Here, we introduce locally linear embedding (LLE), an unsupervised learning algorithm that computes low-dimensional, neighborhood-preserving embeddings of high-dimensional inputs. Unlike clustering methods for local dimensionality reduction, LLE maps its inputs into a single global coordinate system of lower dimensionality, and its optimizations do not involve local minima. By exploiting the local symmetries of linear reconstructions, LLE is able to learn the global structure of nonlinear manifolds, such as those generated by images of faces or documents of text.
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Roweis ST, Lawrence LK. Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science. 2000;290(5500):2323-2326.
Roweis, S. T., & Lawrence, L. K. (2000). Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science, 290(5500), 2323-2326. doi:10.1126/science.290.5500.2323
Roweis, S. T., and Lawrence, L. K. 2000. “Nonlinear Dimensionality Reduction by Locally Linear Embedding”. Science 290 (5500): 2323-2326.
Roweis, S. T., and Lawrence, L. K. (2000). Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science 290, 2323-2326.
Roweis, S.T., & Lawrence, L.K., 2000. Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science, 290(5500), p 2323-2326.
S.T. Roweis and L.K. Lawrence, “Nonlinear Dimensionality Reduction by Locally Linear Embedding”, Science, vol. 290, 2000, pp. 2323-2326.
Roweis, S.T., Lawrence, L.K.: Nonlinear Dimensionality Reduction by Locally Linear Embedding. Science. 290, 2323-2326 (2000).
Roweis, S. T., and Lawrence, L. K. “Nonlinear Dimensionality Reduction by Locally Linear Embedding”. Science 290.5500 (2000): 2323-2326.

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He X, Wang X, Yi H, Chen Y, Zhang X, Yu J, He X., J Biomed Opt 22(4), 2017
PMID: 28430853
M-MRI: A Manifold-based Framework to Highly Accelerated Dynamic Magnetic Resonance Imaging.
Nakarmi U, Slavakis K, Lyu J, Ying L., Proc IEEE Int Symp Biomed Imaging 2017(), 2017
PMID: 30956752
Hippocampus Segmentation Based on Local Linear Mapping.
Pang S, Jiang J, Lu Z, Li X, Yang W, Huang M, Zhang Y, Feng Y, Huang W, Feng Q., Sci Rep 7(), 2017
PMID: 28368016
Low-Rank Embedding for Robust Image Feature Extraction.
Wai Keung Wong, Zhihui Lai, Jiajun Wen, Xiaozhao Fang, Yuwu Lu., IEEE Trans Image Process 26(6), 2017
PMID: 28410104
Supervised learning and dimension reduction techniques for quantification of retinal fluid in optical coherence tomography images.
Breger A, Ehler M, Bogunovic H, Waldstein SM, Philip AM, Schmidt-Erfurth U, Gerendas BS., Eye (Lond) 31(8), 2017
PMID: 28430181
Manifold Embedding and Semantic Segmentation for Intraoperative Guidance With Hyperspectral Brain Imaging.
Ravi D, Fabelo H, Callic GM, Yang GZ., IEEE Trans Med Imaging 36(9), 2017
PMID: 28436854
Geometry and Radiometry Invariant Matched Manifold Detection.
Sharon R, Francos JM, Hagege RR., IEEE Trans Image Process 26(9), 2017
PMID: 28463194
Scalable Image Coding Based on Epitomes.
Alain M, Guillemot C, Thoreau D, Guillotel P., IEEE Trans Image Process 26(8), 2017
PMID: 28499998
Discriminative Transformation for Multi-Dimensional Temporal Sequences.
Bing Su, Xiaoqing Ding, Changsong Liu, Hao Wang, Ying Wu., IEEE Trans Image Process 26(7), 2017
PMID: 28534772
Label Information Guided Graph Construction for Semi-Supervised Learning.
Zhuang L, Zhou Z, Gao S, Yin J, Lin Z, Ma Y., IEEE Trans Image Process 26(9), 2017
PMID: 28541200
Metabolite marker discovery for the detection of bladder cancer by comparative metabolomics.
Shao CH, Chen CL, Lin JY, Chen CJ, Fu SH, Chen YT, Chang YS, Yu JS, Tsui KH, Juo CG, Wu KP., Oncotarget 8(24), 2017
PMID: 28415579
Clustering: how much bias do we need?
Lorimer T, Held J, Stoop R., Philos Trans A Math Phys Eng Sci 375(2096), 2017
PMID: 28507238
Neural Manifolds for the Control of Movement.
Gallego JA, Perich MG, Miller LE, Solla SA., Neuron 94(5), 2017
PMID: 28595054
An integrated calcium imaging processing toolbox for the analysis of neuronal population dynamics.
Romano SA, Pérez-Schuster V, Jouary A, Boulanger-Weill J, Candeo A, Pietri T, Sumbre G., PLoS Comput Biol 13(6), 2017
PMID: 28591182
Multimodal Similarity Gaussian Process Latent Variable Model.
Song G, Wang S, Huang Q, Tian Q., IEEE Trans Image Process 26(9), 2017
PMID: 28600247
Sensory Metrics of Neuromechanical Trust.
Softky W, Benford C., Neural Comput 29(9), 2017
PMID: 28599118
Face Hallucination Using Linear Models of Coupled Sparse Support.
Farrugia RA, Guillemot C., IEEE Trans Image Process 26(9), 2017
PMID: 28641259
Block-Diagonal Constrained Low-Rank and Sparse Graph for Discriminant Analysis of Image Data.
Guo T, Tan X, Zhang L, Xie C, Deng L., Sensors (Basel) 17(7), 2017
PMID: 28640206
A Kernel-Based Low-Rank (KLR) Model for Low-Dimensional Manifold Recovery in Highly Accelerated Dynamic MRI.
Nakarmi U, Wang Y, Lyu J, Liang D, Ying L., IEEE Trans Med Imaging 36(11), 2017
PMID: 28692970
Fast and Orthogonal Locality Preserving Projections for Dimensionality Reduction.
Rong Wang, Feiping Nie, Richang Hong, Xiaojun Chang, Xiaojun Yang, Weizhong Yu., IEEE Trans Image Process 26(10), 2017
PMID: 28708560
Local network component analysis for quantifying transcription factor activities.
Shi Q, Zhang C, Guo W, Zeng T, Lu L, Jiang Z, Wang Z, Liu J, Chen L., Methods 124(), 2017
PMID: 28710010
Similarity regularized sparse group lasso for cup to disc ratio computation.
Cheng J, Zhang Z, Tao D, Wong DWK, Liu J, Baskaran M, Aung T, Wong TY., Biomed Opt Express 8(8), 2017
PMID: 28856048
F-norm distance metric based robust 2DPCA and face recognition.
Li T, Li M, Gao Q, Xie D., Neural Netw 94(), 2017
PMID: 28806714
Task-dependent recurrent dynamics in visual cortex.
Tajima S, Koida K, Tajima CI, Suzuki H, Aihara K, Komatsu H., Elife 6(), 2017
PMID: 28737487
LLE Score: A New Filter-Based Unsupervised Feature Selection Method Based on Nonlinear Manifold Embedding and Its Application to Image Recognition.
Chao Yao, Ya-Feng Liu, Bo Jiang, Jungong Han, Junwei Han., IEEE Trans Image Process 26(11), 2017
PMID: 28767370
MR-NTD: Manifold Regularization Nonnegative Tucker Decomposition for Tensor Data Dimension Reduction and Representation.
Li X, Ng MK, Cong G, Ye Y, Wu Q., IEEE Trans Neural Netw Learn Syst 28(8), 2017
PMID: 28727548
Discriminative clustering on manifold for adaptive transductive classification.
Zhang Z, Jia L, Zhang M, Li B, Zhang L, Li F., Neural Netw 94(), 2017
PMID: 28822323
Toward Optimal Manifold Hashing via Discrete Locally Linear Embedding.
Rongrong Ji, Hong Liu, Liujuan Cao, Di Liu, Yongjian Wu, Feiyue Huang., IEEE Trans Image Process 26(11), 2017
PMID: 28783633
Out-of-Sample Extension for Dimensionality Reduction of Noisy Time Series.
Dadkhahi H, Duarte MF, Marlin BM., IEEE Trans Image Process 26(11), 2017
PMID: 28783635
Nonnegative Matrix Factorization with Rank Regularization and Hard Constraint.
Shang R, Liu C, Meng Y, Jiao L, Stolkin R., Neural Comput 29(9), 2017
PMID: 28777717
Massively parallel unsupervised single-particle cryo-EM data clustering via statistical manifold learning.
Wu J, Ma YB, Congdon C, Brett B, Chen S, Xu Y, Ouyang Q, Mao Y., PLoS One 12(8), 2017
PMID: 28786986
Reconstruction of normal forms by learning informed observation geometries from data.
Yair O, Talmon R, Coifman RR, Kevrekidis IG., Proc Natl Acad Sci U S A 114(38), 2017
PMID: 28831006
Estimating the intrinsic dimension of datasets by a minimal neighborhood information.
Facco E, d'Errico M, Rodriguez A, Laio A., Sci Rep 7(1), 2017
PMID: 28939866
Refined Spectral Clustering via Embedded Label Propagation.
Chang YS, Nie F, Li Z, Chang X, Huang H., Neural Comput 29(12), 2017
PMID: 28957021
Model-based branching point detection in single-cell data by K-branches clustering.
Chlis NK, Wolf FA, Theis FJ., Bioinformatics 33(20), 2017
PMID: 28582478
Vicus: Exploiting local structures to improve network-based analysis of biological data.
Wang B, Huang L, Zhu Y, Kundaje A, Batzoglou S, Goldenberg A., PLoS Comput Biol 13(10), 2017
PMID: 29023470
Application of Deep Learning in Automated Analysis of Molecular Images in Cancer: A Survey.
Xue Y, Chen S, Qin J, Liu Y, Huang B, Chen H., Contrast Media Mol Imaging 2017(), 2017
PMID: 29114182
A Hyperspectral Image Classification Framework with Spatial Pixel Pair Features.
Ran L, Zhang Y, Wei W, Zhang Q., Sensors (Basel) 17(10), 2017
PMID: 29065535
Machine learning meets complex networks via coalescent embedding in the hyperbolic space.
Muscoloni A, Thomas JM, Ciucci S, Bianconi G, Cannistraci CV., Nat Commun 8(1), 2017
PMID: 29151574
Elastic K-means using posterior probability.
Zheng A, Jiang B, Li Y, Zhang X, Ding C., PLoS One 12(12), 2017
PMID: 29240756
A unified frame of predicting side effects of drugs by using linear neighborhood similarity.
Zhang W, Yue X, Liu F, Chen Y, Tu S, Zhang X., BMC Syst Biol 11(suppl 6), 2017
PMID: 29297371
Ensemble Manifold Rank Preserving for Acceleration-Based Human Activity Recognition.
Tao D, Jin L, Yuan Y, Xue Y., IEEE Trans Neural Netw Learn Syst 27(6), 2016
PMID: 25265635
Computational Patient Avatars for Surgery Planning.
González D, Cueto E, Chinesta F., Ann Biomed Eng 44(1), 2016
PMID: 26101033
Feature Importance in Nonlinear Embeddings (FINE): Applications in Digital Pathology.
Ginsburg SB, Lee G, Ali S, Madabhushi A., IEEE Trans Med Imaging 35(1), 2016
PMID: 26186772
Low-Rank Preserving Projections.
Lu Y, Lai Z, Xu Y, Li X, Zhang D, Yuan C., IEEE Trans Cybern 46(8), 2016
PMID: 26277014
Subspace Regularized Sparse Multitask Learning for Multiclass Neurodegenerative Disease Identification.
Zhu X, Suk HI, Lee SW, Shen D., IEEE Trans Biomed Eng 63(3), 2016
PMID: 26276982
A novel sparse coding algorithm for classification of tumors based on gene expression data.
Kolali Khormuji M, Bazrafkan M., Med Biol Eng Comput 54(6), 2016
PMID: 26337064
Multiple Representations-Based Face Sketch-Photo Synthesis.
Peng C, Gao X, Wang N, Tao D, Li X, Li J., IEEE Trans Neural Netw Learn Syst 27(11), 2016
PMID: 26357409
Default network connectivity decodes brain states with simulated microgravity.
Zeng LL, Liao Y, Zhou Z, Shen H, Liu Y, Liu X, Hu D., Cogn Neurodyn 10(2), 2016
PMID: 27066149
Structure-Preserving Binary Representations for RGB-D Action Recognition.
Yu M, Liu L, Shao L., IEEE Trans Pattern Anal Mach Intell 38(8), 2016
PMID: 26485473
Matched signal detection on graphs: Theory and application to brain imaging data classification.
Hu C, Sepulcre J, Johnson KA, Fakhri GE, Lu YM, Li Q., Neuroimage 125(), 2016
PMID: 26481679
Characterizing Awake and Anesthetized States Using a Dimensionality Reduction Method.
Mirsadeghi M, Behnam H, Shalbaf R, Jelveh Moghadam H., J Med Syst 40(1), 2016
PMID: 26573650
Scalable High-Performance Image Registration Framework by Unsupervised Deep Feature Representations Learning.
Wu G, Kim M, Wang Q, Munsell BC, Shen D., IEEE Trans Biomed Eng 63(7), 2016
PMID: 26552069
Local Feature Discriminant Projection.
Yu M, Shao L, Zhen X, He X., IEEE Trans Pattern Anal Mach Intell 38(9), 2016
PMID: 26552074
Simultaneous CT-MRI Reconstruction for Constrained Imaging Geometries Using Structural Coupling and Compressive Sensing.
Xi Y, Zhao J, Bennett JR, Stacy MR, Sinusas AJ, Wang G., IEEE Trans Biomed Eng 63(6), 2016
PMID: 26672028
Dynamic MRI Using SmooThness Regularization on Manifolds (SToRM).
Poddar S, Jacob M., IEEE Trans Med Imaging 35(4), 2016
PMID: 26685228
Learning Linear Representation of Space Partitioning Trees Based on Unsupervised Kernel Dimension Reduction.
Hongming Shan, Junping Zhang, Kruger U., IEEE Trans Cybern 46(12), 2016
PMID: 28055934
Medoidshift clustering applied to genomic bulk tumor data.
Roman T, Xie L, Schwartz R., BMC Genomics 17 Suppl 1(), 2016
PMID: 26817708
Serum-Based Culture Conditions Provoke Gene Expression Variability in Mouse Embryonic Stem Cells as Revealed by Single-Cell Analysis.
Guo G, Pinello L, Han X, Lai S, Shen L, Lin TW, Zou K, Yuan GC, Orkin SH., Cell Rep 14(4), 2016
PMID: 26804902
Chemoinformatic Classification Methods and their Applicability Domain.
Mathea M, Klingspohn W, Baumann K., Mol Inform 35(5), 2016
PMID: 27492083
Discriminative Semantic Subspace Analysis for Relevance Feedback.
Zhang L, Shum HP, Shao L., IEEE Trans Image Process 25(3), 2016
PMID: 26780793
Postoperative 3D spine reconstruction by navigating partitioning manifolds.
Kadoury S, Labelle H, Parent S., Med Phys 43(3), 2016
PMID: 26936692
Radiomics: a new application from established techniques.
Parekh V, Jacobs MA., Expert Rev Precis Med Drug Dev 1(2), 2016
PMID: 28042608
Reconstructing Face Image from the Thermal Infrared Spectrum to the Visible Spectrum.
Kresnaraman B, Deguchi D, Takahashi T, Mekada Y, Ide I, Murase H., Sensors (Basel) 16(4), 2016
PMID: 27110781
Extensions to a manifold learning framework for time-series analysis on dynamic manifolds in bioelectric signals.
Erem B, Martinez Orellana R, Hyde DE, Peters JM, Duffy FH, Stovicek P, Warfield SK, MacLeod RS, Tadmor G, Brooks DH., Phys Rev E 93(4), 2016
PMID: 27176304
Noise reduction in intracranial pressure signal using causal shape manifolds.
Rajagopal A, Hamilton RB, Scalzo F., Biomed Signal Process Control 28(), 2016
PMID: 28936230
Bayesian Nonparametric Clustering for Positive Definite Matrices.
Cherian A, Morellas V, Papanikolopoulos N., IEEE Trans Pattern Anal Mach Intell 38(5), 2016
PMID: 27046838
Cauchy graph embedding based diffusion model for salient object detection.
Tan Y, Li Y, Chen C, Yu JG, Tian J., J Opt Soc Am A Opt Image Sci Vis 33(5), 2016
PMID: 27140886
Regularized Embedded Multiple Kernel Dimensionality Reduction for Mine Signal Processing.
Li S, Liu B, Zhang C., Comput Intell Neurosci 2016(), 2016
PMID: 27247562
SLICER: inferring branched, nonlinear cellular trajectories from single cell RNA-seq data.
Welch JD, Hartemink AJ, Prins JF., Genome Biol 17(1), 2016
PMID: 27215581
Face Recognition With Pose Variations and Misalignment via Orthogonal Procrustes Regression.
Tai Y, Yang J, Zhang Y, Luo L, Qian J, Chen Y., IEEE Trans Image Process 25(6), 2016
PMID: 27071166
Proteomic systems evaluation of the molecular validity of preclinical psychosis models compared to schizophrenia brain pathology.
Cox DA, Gottschalk MG, Wesseling H, Ernst A, Cooper JD, Bahn S., Schizophr Res 177(1-3), 2016
PMID: 27335180
Supervised Filter Learning for Representation Based Face Recognition.
Bi C, Zhang L, Qi M, Zheng C, Yi Y, Wang J, Zhang B., PLoS One 11(7), 2016
PMID: 27416030
Div-Seq: Single-nucleus RNA-Seq reveals dynamics of rare adult newborn neurons.
Habib N, Li Y, Heidenreich M, Swiech L, Avraham-Davidi I, Trombetta JJ, Hession C, Zhang F, Regev A., Science 353(6302), 2016
PMID: 27471252
node2vec: Scalable Feature Learning for Networks.
Grover A, Leskovec J., KDD 2016(), 2016
PMID: 27853626
Toward a severity index for ROP: An unsupervised approach.
Peng Tian, Ataer-Cansizoglu E, Kalpathy-Cramer J, Ostmo S, Jonas K, Chan RV, Campbell JP, Chiang MF, Erdogmus D., Conf Proc IEEE Eng Med Biol Soc 2016(), 2016
PMID: 28268567
A preliminary review of influential works in data-driven discovery.
Stalzer M, Mentzel C., Springerplus 5(1), 2016
PMID: 27540499
Correlation coefficient based supervised locally linear embedding for pulmonary nodule recognition.
Wu P, Xia K, Yu H., Comput Methods Programs Biomed 136(), 2016
PMID: 27686707
CAFÉ-Map: Context Aware Feature Mapping for mining high dimensional biomedical data.
Minhas FUAA, Asif A, Arif M., Comput Biol Med 79(), 2016
PMID: 27764717
Charting molecular free-energy landscapes with an atlas of collective variables.
Hashemian B, Millán D, Arroyo M., J Chem Phys 145(17), 2016
PMID: 27825245
Manifold regularization for sparse unmixing of hyperspectral images.
Liu J, Zhang C, Zhang J, Li H, Gao Y., Springerplus 5(1), 2016
PMID: 27933263
Stimulus-Driven Population Activity Patterns in Macaque Primary Visual Cortex.
Cowley BR, Smith MA, Kohn A, Yu BM., PLoS Comput Biol 12(12), 2016
PMID: 27935935
Person reidentification by minimum classification error-based KISS metric learning.
Tao D, Jin L, Wang Y, Li X., IEEE Trans Cybern 45(2), 2015
PMID: 25486658
A framework for optimal kernel-based manifold embedding of medical image data.
Zimmer VA, Lekadir K, Hoogendoorn C, Frangi AF, Piella G., Comput Med Imaging Graph 41(), 2015
PMID: 25008538
United iterative reconstruction for spectral computed tomography.
Xi Y, Chen Y, Tang R, Sun J, Zhao J., IEEE Trans Med Imaging 34(3), 2015
PMID: 25051547
Discriminative embedded clustering: a framework for grouping high-dimensional data.
Hou C, Nie F, Yi D, Tao D., IEEE Trans Neural Netw Learn Syst 26(6), 2015
PMID: 25095267
Nonlinear Topological Component Analysis: Application to Age-Invariant Face Recognition.
Bouchaffra D., IEEE Trans Neural Netw Learn Syst 26(7), 2015
PMID: 25134092
Manifold learning based ECG-free free-breathing cardiac CINE MRI.
Usman M, Atkinson D, Kolbitsch C, Schaeffter T, Prieto C., J Magn Reson Imaging 41(6), 2015
PMID: 25124545
Manifold Learning in MR spectroscopy using nonlinear dimensionality reduction and unsupervised clustering.
Yang G, Raschke F, Barrick TR, Howe FA., Magn Reson Med 74(3), 2015
PMID: 25199640
Extrasynaptic glutamate NMDA receptors: key players in striatal function.
Garcia-Munoz M, Lopez-Huerta VG, Carrillo-Reid L, Arbuthnott GW., Neuropharmacology 89(), 2015
PMID: 25239809
Manifold Adaptive Label Propagation for Face Clustering.
Pei X, Lyu Z, Chen C, Chen C., IEEE Trans Cybern 45(8), 2015
PMID: 25291812
Similarity Learning of Manifold Data.
Chen SB, Ding CH, Luo B., IEEE Trans Cybern 45(9), 2015
PMID: 25312973
Manifold learning on brain functional networks in aging.
Qiu A, Lee A, Tan M, Chung MK., Med Image Anal 20(1), 2015
PMID: 25476411
Echocardiography without electrocardiogram using nonlinear dimensionality reduction methods.
Shalbaf A, AlizadehSani Z, Behnam H., J Med Ultrason (2001) 42(2), 2015
PMID: 26576567
Label image constrained multiatlas selection.
Yan P, Cao Y, Yuan Y, Turkbey B, Choyke PL., IEEE Trans Cybern 45(6), 2015
PMID: 25415994
Large-Scale Unsupervised Hashing with Shared Structure Learning.
Liu X, Mu Y, Zhang D, Lang B, Li X., IEEE Trans Cybern 45(9), 2015
PMID: 25420275
Targeting accurate object extraction from an image: a comprehensive study of natural image matting.
Zhu Q, Shao L, Li X, Wang L., IEEE Trans Neural Netw Learn Syst 26(2), 2015
PMID: 25423658
Cell words: modelling the visual appearance of cells in histopathology images.
Sirinukunwattana K, Khan AM, Rajpoot NM., Comput Med Imaging Graph 42(), 2015
PMID: 25498246
Multilayer Joint Gait-Pose Manifolds for Human Gait Motion Modeling.
Ding M, Fan G., IEEE Trans Cybern 45(11), 2015
PMID: 25532201
Symmetric smoothing filters from global consistency constraints.
Haque SM, Pai GP, Govindu VM., IEEE Trans Image Process 24(5), 2015
PMID: 25532176
Robust action recognition via borrowing information across video modalities.
Tang NC, Lin YY, Hua JH, Wei SE, Weng MF, Liao HY., IEEE Trans Image Process 24(2), 2015
PMID: 25546860
Learning-regulated context relevant topographical map.
Hartono P, Hollensen P, Trappenberg T., IEEE Trans Neural Netw Learn Syst 26(10), 2015
PMID: 25546864
A new fully automated approach for aligning and comparing shapes.
Boyer DM, Puente J, Gladman JT, Glynn C, Mukherjee S, Yapuncich GS, Daubechies I., Anat Rec (Hoboken) 298(1), 2015
PMID: 25529243
Topological obstructions in the way of data-driven collective variables.
Hashemian B, Arroyo M., J Chem Phys 142(4), 2015
PMID: 25637964
Twin support vector machine for clustering.
Wang Z, Shao YH, Bai L, Deng NY., IEEE Trans Neural Netw Learn Syst 26(10), 2015
PMID: 25576578
Multivariate pattern analysis reveals anatomical connectivity differences between the left and right mesial temporal lobe epilepsy.
Fang P, An J, Zeng LL, Shen H, Chen F, Wang W, Qiu S, Hu D., Neuroimage Clin 7(), 2015
PMID: 25844312
Sparse dissimilarity-constrained coding for glaucoma screening.
Cheng J, Yin F, Wong DW, Tao D, Liu J., IEEE Trans Biomed Eng 62(5), 2015
PMID: 25585408
Deformed graph laplacian for semisupervised learning.
Gong C, Liu T, Tao D, Fu K, Tu E, Yang J., IEEE Trans Neural Netw Learn Syst 26(10), 2015
PMID: 25608310
Scatter balance: an angle-based supervised dimensionality reduction.
Liu S, Feng L, Qiao H., IEEE Trans Neural Netw Learn Syst 26(2), 2015
PMID: 25608290
Systematic characterization of protein folding pathways using diffusion maps: application to Trp-cage miniprotein.
Kim SB, Dsilva CJ, Kevrekidis IG, Debenedetti PG., J Chem Phys 142(8), 2015
PMID: 25725756
A framework of joint graph embedding and sparse regression for dimensionality reduction.
Xiaoshuang Shi, Zhenhua Guo, Zhihui Lai, Yujiu Yang, Zhifeng Bao, Zhang D., IEEE Trans Image Process 24(4), 2015
PMID: 25706635
Computer-Aided Detection and diagnosis for prostate cancer based on mono and multi-parametric MRI: a review.
Lemaître G, Martí R, Freixenet J, Vilanova JC, Walker PM, Meriaudeau F., Comput Biol Med 60(), 2015
PMID: 25747341
Structure constrained semi-nonnegative matrix factorization for EEG-based motor imagery classification.
Lu N, Li T, Pan J, Ren X, Feng Z, Miao H., Comput Biol Med 60(), 2015
PMID: 25747342
Scaling up graph-based semisupervised learning via prototype vector machines.
Zhang K, Lan L, Kwok JT, Vucetic S, Parvin B., IEEE Trans Neural Netw Learn Syst 26(3), 2015
PMID: 25720002
Multi-frame image super resolution based on sparse coding.
Kato T, Hino H, Murata N., Neural Netw 66(), 2015
PMID: 25805366
Cortical spatiotemporal dimensionality reduction for visual grouping.
Cocci G, Barbieri D, Citti G, Sarti A., Neural Comput 27(6), 2015
PMID: 25826020
Temporal ordering and registration of images in studies of developmental dynamics.
Dsilva CJ, Lim B, Lu H, Singer A, Kevrekidis IG, Shvartsman SY., Development 142(9), 2015
PMID: 25834019
Classification on the monogenic scale space: application to target recognition in SAR image.
Ganggang Dong, Gangyao Kuang., IEEE Trans Image Process 24(8), 2015
PMID: 25872212
Face sketch synthesis via sparse representation-based greedy search.
Shengchuan Zhang, Xinbo Gao, Nannan Wang, Jie Li, Mingjin Zhang., IEEE Trans Image Process 24(8), 2015
PMID: 25879946
Graph embedded nonparametric mutual information for supervised dimensionality reduction.
Bouzas D, Arvanitopoulos N, Tefas A., IEEE Trans Neural Netw Learn Syst 26(5), 2015
PMID: 25881367
Robust Nonnegative Patch Alignment for Dimensionality Reduction.
You X, Ou W, Chen CL, Li Q, Zhu Z, Tang Y., IEEE Trans Neural Netw Learn Syst 26(11), 2015
PMID: 25955994
Random geometric prior forest for multiclass object segmentation.
Liu X, Song M, Tao D, Bu J, Chen C., IEEE Trans Image Process 24(10), 2015
PMID: 25974937
Echocardiogram enhancement using supervised manifold denoising.
Wu H, Huynh TT, Souvenir R., Med Image Anal 24(1), 2015
PMID: 26072166
A spectral graph regression model for learning brain connectivity of Alzheimer's disease.
Hu C, Cheng L, Sepulcre J, Johnson KA, Fakhri GE, Lu YM, Li Q., PLoS One 10(5), 2015
PMID: 26024224
Hashing on nonlinear manifolds.
Shen F, Shen C, Shi Q, van den Hengel A, Tang Z, Shen HT., IEEE Trans Image Process 24(6), 2015
PMID: 25826800
Local Laplacian Coding From Theoretical Analysis of Local Coding Schemes for Locally Linear Classification.
Pang J, Qin L, Zhang C, Zhang W, Huang Q, Yin B., IEEE Trans Cybern 45(12), 2015
PMID: 26054081
Local configuration pattern features for age-related macular degeneration characterization and classification.
Mookiah MR, Acharya UR, Fujita H, Koh JE, Tan JH, Noronha K, Bhandary SV, Chua CK, Lim CM, Laude A, Tong L., Comput Biol Med 63(), 2015
PMID: 26093788
Local Sparse Structure Denoising for Low-Light-Level Image.
Han J, Yue J, Zhang Y, Bai L., IEEE Trans Image Process 24(12), 2015
PMID: 26099144
Content-based image retrieval of digitized histopathology in boosted spectrally embedded spaces.
Sridhar A, Doyle S, Madabhushi A., J Pathol Inform 6(), 2015
PMID: 26167385
Local manifold learning for multiatlas segmentation: application to hippocampal segmentation in healthy population and Alzheimer's disease.
Li XW, Li QL, Li SY, Li DY, Alzheimer's Disease Neuroimaging Initiative., CNS Neurosci Ther 21(10), 2015
PMID: 26122409
Full-space local topology extraction for cross-modal retrieval.
Zhang L, Zhang Y, Hong R, Tian Q., IEEE Trans Image Process 24(7), 2015
PMID: 25838520
Magnetic resonance imaging in Alzheimer's Disease Neuroimaging Initiative 2.
Jack CR, Barnes J, Bernstein MA, Borowski BJ, Brewer J, Clegg S, Dale AM, Carmichael O, Ching C, DeCarli C, Desikan RS, Fennema-Notestine C, Fjell AM, Fletcher E, Fox NC, Gunter J, Gutman BA, Holland D, Hua X, Insel P, Kantarci K, Killiany RJ, Krueger G, Leung KK, Mackin S, Maillard P, Malone IB, Mattsson N, McEvoy L, Modat M, Mueller S, Nosheny R, Ourselin S, Schuff N, Senjem ML, Simonson A, Thompson PM, Rettmann D, Vemuri P, Walhovd K, Zhao Y, Zuk S, Weiner M., Alzheimers Dement 11(7), 2015
PMID: 26194310
Bearing Fault Diagnosis Based on Statistical Locally Linear Embedding.
Wang X, Zheng Y, Zhao Z, Wang J., Sensors (Basel) 15(7), 2015
PMID: 26153771
Optimal combination of feature selection and classification via local hyperplane based learning strategy.
Cheng X, Cai H, Zhang Y, Xu B, Su W., BMC Bioinformatics 16(), 2015
PMID: 26159165
A Class of Manifold Regularized Multiplicative Update Algorithms for Image Clustering.
Yang S, Yi Z, He X, Li X., IEEE Trans Image Process 24(12), 2015
PMID: 26186793
A simplicial complex-based approach to unmixing tumor progression data.
Roman T, Nayyeri A, Fasy BT, Schwartz R., BMC Bioinformatics 16(), 2015
PMID: 26264682
Dual Graph Regularized Latent Low-Rank Representation for Subspace Clustering.
Yin M, Gao J, Lin Z, Shi Q, Guo Y., IEEE Trans Image Process 24(12), 2015
PMID: 26316125
Multi-atlas learner fusion: An efficient segmentation approach for large-scale data.
Asman AJ, Huo Y, Plassard AJ, Landman BA., Med Image Anal 26(1), 2015
PMID: 26363845
Learning Sample Specific Weights for Late Fusion.
Lai KT, Liu D, Chang SF, Chen MS., IEEE Trans Image Process 24(9), 2015
PMID: 25879948
Learning a Nonnegative Sparse Graph for Linear Regression.
Fang X, Xu Y, Li X, Lai Z, Wong WK., IEEE Trans Image Process 24(9), 2015
PMID: 25910093
Validation of clinical acceptability of an atlas-based segmentation algorithm for the delineation of organs at risk in head and neck cancer.
Hoang Duc AK, Eminowicz G, Mendes R, Wong SL, McClelland J, Modat M, Cardoso MJ, Mendelson AF, Veiga C, Kadir T, D'Souza D, Ourselin S., Med Phys 42(9), 2015
PMID: 26328953
Cross-Domain Matching with Squared-Loss Mutual Information.
Yamada M, Sigal L, Raptis M, Toyoda M, Chang Y, Sugiyama M., IEEE Trans Pattern Anal Mach Intell 37(9), 2015
PMID: 26353125
Multiple Manifold Clustering Using Curvature Constrained Path.
Babaeian A, Bayestehtashk A, Bandarabadi M., PLoS One 10(9), 2015
PMID: 26375819
Dimensionality Reduction by Integrating Sparse Representation and Fisher Criterion and its Applications.
Gao Q, Wang Q, Huang Y, Gao X, Hong X, Zhang H., IEEE Trans Image Process 24(12), 2015
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No-reference image sharpness assessment in autoregressive parameter space.
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Unraveling flow patterns through nonlinear manifold learning.
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Selecting protein families for environmental features based on manifold regularization.
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A regularized approach for geodesic-based semisupervised multimanifold learning.
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Actively learning human gaze shifting paths for semantics-aware photo cropping.
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Regional manifold learning for disease classification.
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Human detection in images via piecewise linear support vector machines.
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Multi-kernel graph embedding for detection, Gleason grading of prostate cancer via MRI/MRS.
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Categorizing dynamic textures using a bag of dynamical systems.
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Identifying individuals with antisocial personality disorder using resting-state FMRI.
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Evaluation of Dimensionality-reduction Methods from Peptide Folding-unfolding Simulations.
Duan M, Fan J, Li M, Han L, Huo S., J Chem Theory Comput 9(5), 2013
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Robust kernel representation with statistical local features for face recognition.
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Condensing the omics fog of microbial communities.
Muller EE, Glaab E, May P, Vlassis N, Wilmes P., Trends Microbiol 21(7), 2013
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Fast discriminative stochastic neighbor embedding analysis.
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Locally linear embedding (LLE) for MRI based Alzheimer's disease classification.
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Rank preserving sparse learning for Kinect based scene classification.
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Seismic target classification using a wavelet packet manifold in unattended ground sensors systems.
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General subspace learning with corrupted training data via graph embedding.
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Dictionary learning-based subspace structure identification in spectral clustering.
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Ranking graph embedding for learning to rerank.
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Using manifold learning for atlas selection in multi-atlas segmentation.
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Statistical Shape Model for Manifold Regularization: Gleason grading of prostate histology.
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Transductive face sketch-photo synthesis.
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Multi-scale locality-constrained spatiotemporal coding for local feature based human action recognition.
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Molecular recognition of DNA by ligands: roughness and complexity of the free energy profile.
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Mean vector component analysis for visualization and clustering of nonnegative data.
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Automated induction of heterogeneous proximity measures for supervised spectral embedding.
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Single image super-resolution with multiscale similarity learning.
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Spectral multidimensional scaling.
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Efficient and rapid derivation of primitive neural stem cells and generation of brain subtype neurons from human pluripotent stem cells.
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Making sense of big data.
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Nonlinear intrinsic variables and state reconstruction in multiscale simulations.
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A spatiotemporal coding mechanism for background-invariant odor recognition.
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Encoding of mixtures in a simple olfactory system.
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Image set based face recognition using self-regularized non-negative coding and adaptive distance metric learning.
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Spatially optimized data-level fusion of texture and shape for face recognition.
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Gait recognition: highly unique dynamic plantar pressure patterns among 104 individuals.
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Endoscopic video manifolds for targeted optical biopsy.
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Initialization independent clustering with actively self-training method.
Nie F, Xu D, Li X., IEEE Trans Syst Man Cybern B Cybern 42(1), 2012
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Use of Self-Organizing Maps for Balanced Scorecard analysis to monitor the performance of dialysis clinic chains.
Cattinelli I, Bolzoni E, Barbieri C, Mari F, Martin-Guerrero JD, Soria-Olivas E, Martinez-Martinez JM, Gomez-Sanchis J, Amato C, Stopper A, Gatti E., Health Care Manag Sci 15(1), 2012
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Semisupervised biased maximum margin analysis for interactive image retrieval.
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Manifold learning for image-based breathing gating in ultrasound and MRI.
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Visualizing Dynamic Data with Maps.
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Nonlinear dimensionality reduction combining MR imaging with non-imaging information.
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Manifold learning for human population structure studies.
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Adaptive manifold learning.
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Joint learning for single-image super-resolution via a coupled constraint.
Gao X, Zhang K, Tao D, Li X., IEEE Trans Image Process 21(2), 2012
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Multiview face recognition: from TensorFace to V-TensorFace and K-TensorFace.
Tian C, Fan G, Gao X, Tian Q., IEEE Trans Syst Man Cybern B Cybern 42(2), 2012
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Machine learning and radiology.
Wang S, Summers RM., Med Image Anal 16(5), 2012
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Dramatic reduction of dimensionality in large biochemical networks owing to strong pair correlations.
Dworkin M, Mukherjee S, Jayaprakash C, Das J., J R Soc Interface 9(73), 2012
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Texture classification from random features.
Liu L, Fieguth PW., IEEE Trans Pattern Anal Mach Intell 34(3), 2012
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Semi-supervised dimension reduction using trace ratio criterion.
Huang Y, Xu D, Nie F., IEEE Trans Neural Netw Learn Syst 23(3), 2012
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Combining multiple approaches for gene microarray classification.
Nanni L, Brahnam S, Lumini A., Bioinformatics 28(8), 2012
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Image super-resolution with sparse neighbor embedding.
Gao X, Zhang K, Tao D, Li X., IEEE Trans Image Process 21(7), 2012
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Histology image analysis for carcinoma detection and grading.
He L, Long LR, Antani S, Thoma GR., Comput Methods Programs Biomed 107(3), 2012
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Shared Kernel Information Embedding for discriminative inference.
Memisevic R, Sigal L, Fleet DJ., IEEE Trans Pattern Anal Mach Intell 34(4), 2012
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A multimedia retrieval framework based on semi-supervised ranking and relevance feedback.
Yang Y, Nie F, Xu D, Luo J, Zhuang Y, Pan Y., IEEE Trans Pattern Anal Mach Intell 34(4), 2012
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Coupled kernel embedding for low resolution face image recognition.
Ren CX, Dai DQ, Yan H., IEEE Trans Image Process 21(8), 2012
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Conjunctive patches subspace learning with side information for collaborative image retrieval.
Zhang L, Wang L, Lin W., IEEE Trans Image Process 21(8), 2012
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Gene classification using parameter-free semi-supervised manifold learning.
Huang H, Feng H., IEEE/ACM Trans Comput Biol Bioinform 9(3), 2012
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Rotation-invariant nonrigid point set matching in cluttered scenes.
Lian W, Zhang L, Zhang D., IEEE Trans Image Process 21(5), 2012
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Three-dimensional face reconstruction from a single image by a coupled RBF network.
Song M, Tao D, Huang X, Chen C, Bu J., IEEE Trans Image Process 21(5), 2012
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Assessing and predicting protein interactions by combining manifold embedding with multiple information integration.
Lei YK, You ZH, Ji Z, Zhu L, Huang DS., BMC Bioinformatics 13 Suppl 7(), 2012
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Learning the dynamics of objects by optimal functional interpolation.
Ahn JH, Kim IY., Neural Comput 24(9), 2012
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Supervised latent linear Gaussian process latent variable model for dimensionality reduction.
Jiang X, Gao J, Wang T, Zheng L., IEEE Trans Syst Man Cybern B Cybern 42(6), 2012
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A least-squares framework for Component Analysis.
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The symmetries of image formation by scattering. I. Theoretical framework.
Giannakis D, Schwander P, Ourmazd A., Opt Express 20(12), 2012
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The symmetries of image formation by scattering. II. Applications.
Schwander P, Giannakis D, Yoon CH, Ourmazd A., Opt Express 20(12), 2012
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Hierarchical patch-based sparse representation--a new approach for resolution enhancement of 4D-CT lung data.
Zhang Y, Wu G, Yap PT, Feng Q, Lian J, Chen W, Shen D., IEEE Trans Med Imaging 31(11), 2012
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Temporal microstructure of cortical networks (TMCN) underlying task-related differences.
Banerjee A, Pillai AS, Sperling JR, Smith JF, Horwitz B., Neuroimage 62(3), 2012
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Protein surface representation and analysis by dimension reduction.
Yang H, Qureshi R, Sacan A., Proteome Sci 10 Suppl 1(), 2012
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Manifold-manifold distance and its application to face recognition with image sets.
Wang R, Shan S, Chen X, Dai Q, Gao W., IEEE Trans Image Process 21(10), 2012
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Spline regression hashing for fast image search.
Liu Y, Wu F, Yang Y, Zhuang Y, Hauptmann AG., IEEE Trans Image Process 21(10), 2012
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Multimodal graph-based reranking for web image search.
Wang M, Li H, Tao D, Lu K, Wu X., IEEE Trans Image Process 21(11), 2012
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Evaluation of hepatic tumor response to yttrium-90 radioembolization therapy using texture signatures generated from contrast-enhanced CT images.
Gensure RH, Foran DJ, Lee VM, Gendel VM, Jabbour SK, Carpizo DR, Nosher JL, Yang L., Acad Radiol 19(10), 2012
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Constrained manifold learning for the characterization of pathological deviations from normality.
Duchateau N, De Craene M, Piella G, Frangi AF., Med Image Anal 16(8), 2012
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Nonlinearities and adaptation of color vision from sequential principal curves analysis.
Laparra V, Jiménez S, Camps-Valls G, Malo J., Neural Comput 24(10), 2012
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Unsupervised image matching based on manifold alignment.
Pei Y, Huang F, Shi F, Zha H., IEEE Trans Pattern Anal Mach Intell 34(8), 2012
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Vector Diffusion Maps and the Connection Laplacian.
Singer A, Wu HT., Commun Pure Appl Math 65(8), 2012
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Adaptive data embedding framework for multiclass classification.
Mu T, Jiang J, Wang Y, Goulermas JY., IEEE Trans Neural Netw Learn Syst 23(8), 2012
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New robust face recognition methods based on linear regression.
Mi JX, Liu JX, Wen J., PLoS One 7(8), 2012
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GPU-FS-kNN: a software tool for fast and scalable kNN computation using GPUs.
Arefin AS, Riveros C, Berretta R, Moscato P., PLoS One 7(8), 2012
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Peripapillary atrophy detection by sparse biologically inspired feature manifold.
Cheng J, Tao D, Liu J, Wong DW, Tan NM, Wong TY, Saw SM., IEEE Trans Med Imaging 31(12), 2012
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Increased cortical-limbic anatomical network connectivity in major depression revealed by diffusion tensor imaging.
Fang P, Zeng LL, Shen H, Wang L, Li B, Liu L, Hu D., PLoS One 7(9), 2012
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Scaling up minimum enclosing ball with total soft margin for training on large datasets.
Hu W, Chung FL, Wang S, Ying W., Neural Netw 36(), 2012
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Locally learning biomedical data using diffusion frames.
Ehler M, Filbir F, Mhaskar HN., J Comput Biol 19(11), 2012
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Embedding retrieval of articulated geometry models.
Tam GK, Lau RW., IEEE Trans Pattern Anal Mach Intell 34(11), 2012
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Proximity-based frameworks for generating embeddings from multi-output data.
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Subspace learning from image gradient orientations.
Tzimiropoulos G, Zafeiriou S, Pantic M., IEEE Trans Pattern Anal Mach Intell 34(12), 2012
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Sparse approximation to the eigensubspace for discrimination.
Lai Z, Wong WK, Jin Z, Yang J, Xu Y., IEEE Trans Neural Netw Learn Syst 23(12), 2012
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Visual Steering and Verification of Mass Spectrometry Data Factorization in Air Quality Research.
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Automatically clustering large-scale miRNA sequences: methods and experiments.
Wan L, Ding J, Jin T, Guan J, Zhou S., BMC Genomics 13 Suppl 8(), 2012
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Graph-preserving sparse nonnegative matrix factorization with application to facial expression recognition.
Zhi R, Flierl M, Ruan Q, Kleijn WB., IEEE Trans Syst Man Cybern B Cybern 41(1), 2011
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Learning similarity with multikernel method.
Tang Y, Li L, Li X., IEEE Trans Syst Man Cybern B Cybern 41(1), 2011
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Face recognition by exploring information jointly in space, scale and orientation.
Lei Z, Liao S, Pietikäinen M, Li SZ., IEEE Trans Image Process 20(1), 2011
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From local pixel structure to global image super-resolution: a new face hallucination framework.
Hu Y, Lam KM, Qiu G, Shen T., IEEE Trans Image Process 20(2), 2011
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A continuous mapping of sleep states through association of EEG with a mesoscale cortical model.
Lopour BA, Tasoglu S, Kirsch HE, Sleigh JW, Szeri AJ., J Comput Neurosci 30(2), 2011
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Semi-supervised cluster analysis of imaging data.
Filipovych R, Resnick SM, Davatzikos C., Neuroimage 54(3), 2011
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Modeling multivariate time series on manifolds with skew radial basis functions.
Jamshidi AA, Kirby MJ., Neural Comput 23(1), 2011
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Graph regularized sparse coding for image representation.
Zheng M, Bu J, Chen C, Wang C, Zhang L, Qiu G, Cai D., IEEE Trans Image Process 20(5), 2011
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Semisupervised dimensionality reduction and classification through virtual label regression.
Nie F, Xu D, Li X, Xiang S., IEEE Trans Syst Man Cybern B Cybern 41(3), 2011
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A Physics-Based Analysis of Image Appearance Models.
Xu Y, Roy-Chowdhury AK., IEEE Trans Pattern Anal Mach Intell 33(8), 2011
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Graph Regularized Nonnegative Matrix Factorization for Data Representation.
Cai D, He X, Han J, Huang TS., IEEE Trans Pattern Anal Mach Intell 33(8), 2011
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Learning a 3D Human Pose Distance Metric from Geometric Pose Descriptor.
Cheng Chen, Yueting Zhuang, Feiping Nie, Yi Yang, Fei Wu, Jun Xiao., IEEE Trans Vis Comput Graph 17(11), 2011
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Principal curve algorithms for partitioning high-dimensional data spaces.
Zhang J, Wang X, Kruger U, Wang FY., IEEE Trans Neural Netw 22(3), 2011
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Clustering gene expression data with a penalized graph-based metric.
Bayá AE, Granitto PM., BMC Bioinformatics 12(), 2011
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Locally synchronized astrocytes.
Sasaki T, Kuga N, Namiki S, Matsuki N, Ikegaya Y., Cereb Cortex 21(8), 2011
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Semisupervised learning using negative labels.
Hou C, Nie F, Wang F, Zhang C, Wu Y., IEEE Trans Neural Netw 22(3), 2011
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Learning linear discriminant projections for dimensionality reduction of image descriptors.
Cai H, Mikolajczyk K, Matas J., IEEE Trans Pattern Anal Mach Intell 33(2), 2011
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Dimensionality of color space in natural images.
Buades A, Lisani JL, Morel JM., J Opt Soc Am A Opt Image Sci Vis 28(2), 2011
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Active Learning Based on Locally Linear Reconstruction.
Zhang L, Chen C, Bu J, Cai D, He X, Huang TS., IEEE Trans Pattern Anal Mach Intell 33(10), 2011
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m-SNE: Multiview Stochastic Neighbor Embedding.
Bo Xie, Yang Mu, Dacheng Tao, Kaiqi Huang., IEEE Trans Syst Man Cybern B Cybern 41(4), 2011
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Beautification of Design Sketches Using Trainable Stroke Clustering and Curve Fitting.
Orbay G, Kara LB., IEEE Trans Vis Comput Graph 17(5), 2011
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Learning adaptive metric for robust visual tracking.
Jiang N, Liu W, Wu Y., IEEE Trans Image Process 20(8), 2011
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Learning a family of detectors via multiplicative kernels.
Yuan Q, Thangali A, Ablavsky V, Sclaroff S., IEEE Trans Pattern Anal Mach Intell 33(3), 2011
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Determination of reaction coordinates via locally scaled diffusion map.
Rohrdanz MA, Zheng W, Maggioni M, Clementi C., J Chem Phys 134(12), 2011
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Maximal Linear Embedding for Dimensionality Reduction.
Wang R, Shan S, Chen X, Chen J, Gao W., IEEE Trans Pattern Anal Mach Intell 33(9), 2011
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A Variance Minimization Criterion to Feature Selection Using Laplacian Regularization.
He X, Ji M, Zhang C, Bao H., IEEE Trans Pattern Anal Mach Intell 33(10), 2011
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Central subspace dimensionality reduction using covariance operators.
Kim M, Pavlovic V., IEEE Trans Pattern Anal Mach Intell 33(4), 2011
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Integrating diffusion maps with umbrella sampling: application to alanine dipeptide.
Ferguson AL, Panagiotopoulos AZ, Debenedetti PG, Kevrekidis IG., J Chem Phys 134(13), 2011
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Hallucinating face in the DCT domain.
Zhang W, Cham WK., IEEE Trans Image Process 20(10), 2011
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Example-driven manifold priors for image deconvolution.
Ni J, Turaga P, Patel VM, Chellappa R., IEEE Trans Image Process 20(11), 2011
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Morphological Classification: Application to Cardiac MRI of Tetralogy of Fallot.
Ye DH, Litt H, Davatzikos C, Pohl KM., Funct Imaging Model Heart 6666(), 2011
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Manifold Learning by Graduated Optimization.
Gashler M, Ventura D, Martinez T., IEEE Trans Syst Man Cybern B Cybern 41(6), 2011
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Gait-based gender classification using mixed conditional random field.
Hu M, Wang Y, Zhang Z, Zhang D., IEEE Trans Syst Man Cybern B Cybern 41(5), 2011
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Human object inpainting using manifold learning-based posture sequence estimation.
Ling CH, Liang YM, Lin CW, Chen YS, Liao HY., IEEE Trans Image Process 20(11), 2011
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Complex object correspondence construction in two-dimensional animation.
Yu J, Liu D, Tao D, Seah HS., IEEE Trans Image Process 20(11), 2011
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Multiple kernel learning for dimensionality reduction.
Lin YY, Liu TL, Fuh CS., IEEE Trans Pattern Anal Mach Intell 33(6), 2011
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Face recognition using nearest feature space embedding.
Chen YN, Han CC, Wang CT, Fan KC., IEEE Trans Pattern Anal Mach Intell 33(6), 2011
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Regression-Based Label Fusion for Multi-Atlas Segmentation.
Wang H, Suh JW, Das S, Pluta J, Altinay M, Yushkevich P., Conf Comput Vis Pattern Recognit Workshops (), 2011
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Invariant object recognition and pose estimation with slow feature analysis.
Franzius M, Wilbert N, Wiskott L., Neural Comput 23(9), 2011
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Spectral clustering on multiple manifolds.
Wang Y, Jiang Y, Wu Y, Zhou ZH., IEEE Trans Neural Netw 22(7), 2011
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PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome.
Zhang J, Mamlouk AM, Martinetz T, Chang S, Wang J, Hilgenfeld R., BMC Bioinformatics 12(), 2011
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Non-negative patch alignment framework.
Guan N, Tao D, Luo Z, Yuan B., IEEE Trans Neural Netw 22(8), 2011
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Orientability and Diffusion Maps.
Singer A, Wu HT., Appl Comput Harmon Anal 31(1), 2011
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From the Cover: Simplifying the representation of complex free-energy landscapes using sketch-map.
Ceriotti M, Tribello GA, Parrinello M., Proc Natl Acad Sci U S A 108(32), 2011
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A combined manifold learning analysis of shape and appearance to characterize neonatal brain development.
Aljabar P, Wolz R, Srinivasan L, Counsell SJ, Rutherford MA, Edwards AD, Hajnal JV, Rueckert D., IEEE Trans Med Imaging 30(12), 2011
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Prototypes for content-based image retrieval in clinical practice.
Depeursinge A, Fischer B, Müller H, Deserno TM., Open Med Inform J 5(suppl 1), 2011
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Morphological appearance manifolds for group-wise morphometric analysis.
Lian NX, Davatzikos C., Med Image Anal 15(6), 2011
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Unsupervised large margin discriminative projection.
Wang F, Zhao B, Zhang C., IEEE Trans Neural Netw 22(9), 2011
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The social network (of protein conformations).
Chodera JD, Pande VS., Proc Natl Acad Sci U S A 108(32), 2011
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A learning-style theory for understanding autistic behaviors.
Qian N, Lipkin RM., Front Hum Neurosci 5(), 2011
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Bag-of-features based medical image retrieval via multiple assignment and visual words weighting.
Wang J, Li Y, Zhang Y, Wang C, Xie H, Chen G, Gao X., IEEE Trans Med Imaging 30(11), 2011
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Tree preserving embedding.
Shieh AD, Hashimoto TB, Airoldi EM., Proc Natl Acad Sci U S A 108(41), 2011
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A user-assisted approach to visualizing multidimensional images.
Lawrence J, Arietta S, Kazhdan M, Lepage D, O'Hagan C., IEEE Trans Vis Comput Graph 17(10), 2011
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Regression reformulations of LLE and LTSA with locally linear transformation.
Xiang S, Nie F, Pan C, Zhang C., IEEE Trans Syst Man Cybern B Cybern 41(5), 2011
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Dopaminergic modulation of the striatal microcircuit: receptor-specific configuration of cell assemblies.
Carrillo-Reid L, Hernández-López S, Tapia D, Galarraga E, Bargas J., J Neurosci 31(42), 2011
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Quantitative analysis of nonlinear embedding.
Zhang J, Wang Q, He L, Zhou ZH., IEEE Trans Neural Netw 22(12), 2011
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An interactive local flattening operator to support digital investigations on artwork surfaces.
Pietroni N, Massimiliano C, Cignoni P, Scopigno R., IEEE Trans Vis Comput Graph 17(12), 2011
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Local Affine Multidimensional Projection.
Joia P, Paulovich FV, Coimbra D, Cuminato JA, Nonato LG., IEEE Trans Vis Comput Graph 17(12), 2011
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Distance approximating dimension reduction of Riemannian manifolds.
Chen C, Zhang J, Fleischer R., IEEE Trans Syst Man Cybern B Cybern 40(1), 2010
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Uncovering mental representations with Markov chain Monte Carlo.
Sanborn AN, Griffiths TL, Shiffrin RM., Cogn Psychol 60(2), 2010
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Discriminative orthogonal neighborhood-preserving projections for classification.
Zhang T, Huang K, Li X, Yang J, Tao D., IEEE Trans Syst Man Cybern B Cybern 40(1), 2010
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Segmentation of the left ventricle from cardiac MR images using a subject-specific dynamical model.
Zhu Y, Papademetris X, Sinusas AJ, Duncan JS., IEEE Trans Med Imaging 29(3), 2010
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Biased discriminant euclidean embedding for content-based image retrieval.
Bian W, Tao D., IEEE Trans Image Process 19(2), 2010
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Evolutionary cross-domain discriminative Hessian Eigenmaps.
Si S, Tao D, Chan KP., IEEE Trans Image Process 19(4), 2010
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Active reranking for web image search.
Tian X, Tao D, Hua XS, Wu X., IEEE Trans Image Process 19(3), 2010
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Learning an intrinsic-variable preserving manifold for dynamic visual tracking.
Qiao H, Zhang P, Zhang B, Zheng S., IEEE Trans Syst Man Cybern B Cybern 40(3), 2010
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An effective method of pruning support vector machine classifiers.
Liang X., IEEE Trans Neural Netw 21(1), 2010
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Feature fusion using locally linear embedding for classification.
Sun BY, Zhang XM, Li J, Mao XM., IEEE Trans Neural Netw 21(1), 2010
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Joint learning of labels and distance metric.
Liu B, Wang M, Hong R, Zha Z, Hua XS., IEEE Trans Syst Man Cybern B Cybern 40(3), 2010
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Learning with l1-graph for image analysis.
Cheng B, Yang J, Yan S, Fu Y, Huang TS., IEEE Trans Image Process 19(4), 2010
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Local matrix learning in clustering and applications for manifold visualization.
Arnonkijpanich B, Hasenfuss A, Hammer B., Neural Netw 23(4), 2010
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Biologically inspired feature manifold for scene classification.
Song D, Tao D., IEEE Trans Image Process 19(1), 2010
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Accurate image search using the contextual dissimilarity measure.
Jegou H, Schmid C, Harzallah H, Verbeek J., IEEE Trans Pattern Anal Mach Intell 32(1), 2010
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Multi-Channel Transfer Function with Dimensionality Reduction.
Kim HS, Schulze JP, Cone AC, Sosinsky GE, Martone ME., Proc SPIE Int Soc Opt Eng 7530(), 2010
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Clustering algorithms in biomedical research: a review.
Xu R, Wunsch DC., IEEE Rev Biomed Eng 3(), 2010
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Fusing local patterns of Gabor magnitude and phase for face recognition.
Xie S, Shan S, Chen X, Chen J., IEEE Trans Image Process 19(5), 2010
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Multiway spectral clustering with out-of-sample extensions through weighted kernel PCA.
Alzate C, Suykens JA., IEEE Trans Pattern Anal Mach Intell 32(2), 2010
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Image inpainting by patch propagation using patch sparsity.
Xu Z, Sun J., IEEE Trans Image Process 19(5), 2010
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Penalized preimage learning in kernel principal component analysis.
Zheng WS, Lai J, Yuen PC., IEEE Trans Neural Netw 21(4), 2010
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Multiview spectral embedding.
Xia T, Tao D, Mei T, Zhang Y., IEEE Trans Syst Man Cybern B Cybern 40(6), 2010
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Low-resolution gait recognition.
Zhang J, Pu J, Chen C, Fleischer R., IEEE Trans Syst Man Cybern B Cybern 40(4), 2010
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Flexible manifold embedding: a framework for semi-supervised and unsupervised dimension reduction.
Nie F, Xu D, Tsang IW, Zhang C., IEEE Trans Image Process 19(7), 2010
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Brief sounds evoke prolonged responses in anesthetized ferret auditory cortex.
Campbell RA, Schulz AL, King AJ, Schnupp JW., J Neurophysiol 103(5), 2010
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Dimensionality reduction of fMRI time series data using locally linear embedding.
Mannfolk P, Wirestam R, Nilsson M, Ståhlberg F, Olsrud J., MAGMA 23(5-6), 2010
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Dual gait generative models for human motion estimation from a single camera.
Zhang X, Fan G., IEEE Trans Syst Man Cybern B Cybern 40(4), 2010
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Nearest-neighbor guided evaluation of data reliability and its applications.
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Kernel entropy component analysis.
Jenssen R., IEEE Trans Pattern Anal Mach Intell 32(5), 2010
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Learning context-sensitive shape similarity by graph transduction.
Bai X, Yang X, Latecki LJ, Liu W, Tu Z., IEEE Trans Pattern Anal Mach Intell 32(5), 2010
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Reference Free Structure Determination through Eigenvectors of Center of Mass Operators.
Coifman RR, Shkolnisky Y, Sigworth FJ, Singer A., Appl Comput Harmon Anal 28(3), 2010
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Derivation of cancer diagnostic and prognostic signatures from gene expression data.
Goodison S, Sun Y, Urquidi V., Bioanalysis 2(5), 2010
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Live-cell tracking using SIFT features in DIC microscopic videos.
Jiang RM, Crookes D, Luo N, Davidson MW., IEEE Trans Biomed Eng 57(9), 2010
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Image super-resolution via sparse representation.
Yang J, Wright J, Huang TS, Ma Y., IEEE Trans Image Process 19(11), 2010
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Learning the dynamical system behind sensory data.
Lee J, Lee SY., Neural Comput 22(6), 2010
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Topology of cyclo-octane energy landscape.
Martin S, Thompson A, Coutsias EA, Watson JP., J Chem Phys 132(23), 2010
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Assessment of the individual fracture risk of the proximal femur by using statistical appearance models.
Schuler B, Fritscher KD, Kuhn V, Eckstein F, Link TM, Schubert R., Med Phys 37(6), 2010
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Super-sparse principal component analyses for high-throughput genomic data.
Lee D, Lee W, Lee Y, Pawitan Y., BMC Bioinformatics 11(), 2010
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Manifold modeling for brain population analysis.
Gerber S, Tasdizen T, Thomas Fletcher P, Joshi S, Whitaker R, Alzheimers Disease Neuroimaging Initiative (ADNI)., Med Image Anal 14(5), 2010
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TurboPixel segmentation using eigen-images.
Xiang S, Pan C, Nie F, Zhang C., IEEE Trans Image Process 19(11), 2010
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Joint manifolds for data fusion.
Davenport MA, Hegde C, Duarte MF, Baraniuk RG., IEEE Trans Image Process 19(10), 2010
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Estimating view parameters from random projections for Tomography using spherical MDS.
Fang Y, Murugappan S, Ramani K., BMC Med Imaging 10(), 2010
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Similarity preserving principal curve: an optimal 1-d feature extractor for data representation.
Sun M, Yang J, Liu C, Yang J., IEEE Trans Neural Netw 21(9), 2010
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Discriminative semi-supervised feature selection via manifold regularization.
Xu Z, King I, Lyu MR, Jin R., IEEE Trans Neural Netw 21(7), 2010
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Global features of neural activity in the olfactory system form a parallel code that predicts olfactory behavior and perception.
Haddad R, Weiss T, Khan R, Nadler B, Mandairon N, Bensafi M, Schneidman E, Sobel N., J Neurosci 30(27), 2010
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Nonnegative principal component analysis for cancer molecular pattern discovery.
Han X., IEEE/ACM Trans Comput Biol Bioinform 7(3), 2010
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Systematic determination of order parameters for chain dynamics using diffusion maps.
Ferguson AL, Panagiotopoulos AZ, Debenedetti PG, Kevrekidis IG., Proc Natl Acad Sci U S A 107(31), 2010
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Network modeling reveals prevalent negative regulatory relationships between signaling sectors in Arabidopsis immune signaling.
Sato M, Tsuda K, Wang L, Coller J, Watanabe Y, Glazebrook J, Katagiri F., PLoS Pathog 6(7), 2010
PMID: 20661428
Dynamics of the Parkinsonian striatal microcircuit: entrainment into a dominant network state.
Jáidar O, Carrillo-Reid L, Hernández A, Drucker-Colín R, Bargas J, Hernández-Cruz A., J Neurosci 30(34), 2010
PMID: 20739553
Clustered Nyström method for large scale manifold learning and dimension reduction.
Zhang K, Kwok JT., IEEE Trans Neural Netw 21(10), 2010
PMID: 20805054
Local-learning-based feature selection for high-dimensional data analysis.
Sun Y, Todorovic S, Goodison S., IEEE Trans Pattern Anal Mach Intell 32(9), 2010
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Training-free, generic object detection using locally adaptive regression kernels.
Seo HJ, Milanfar P., IEEE Trans Pattern Anal Mach Intell 32(9), 2010
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Nonlinear dimension reduction and clustering by Minimum Curvilinearity unfold neuropathic pain and tissue embryological classes.
Cannistraci CV, Ravasi T, Montevecchi FM, Ideker T, Alessio M., Bioinformatics 26(18), 2010
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Dimensionality Reduction on Multi-Dimensional Transfer Functions for Multi-Channel Volume Data Sets.
Kim HS, Schulze JP, Cone AC, Sosinsky GE, Martone ME., Inf Vis 9(3), 2010
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Tensor distance based multilinear locality-preserved maximum information embedding.
Liu Y, Liu Y, Chan KC, Chan KC., IEEE Trans Neural Netw 21(11), 2010
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Kernelized sorting.
Quadrianto N, Smola AJ, Song L, Tuytelaars T., IEEE Trans Pattern Anal Mach Intell 32(10), 2010
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A fast L(p) spike alignment metric.
Dubbs AJ, Seiler BA, Magnasco MO., Neural Comput 22(11), 2010
PMID: 20804383
Age synthesis and estimation via faces: a survey.
Fu Y, Guo G, Huang TS., IEEE Trans Pattern Anal Mach Intell 32(11), 2010
PMID: 20847387
Two-phase mapping for projecting massive data sets.
Paulovich FV, Silva CT, Nonato LG., IEEE Trans Vis Comput Graph 16(6), 2010
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An experimental and computational investigation of spontaneous lasso formation in microcin J25.
Ferguson AL, Zhang S, Dikiy I, Panagiotopoulos AZ, Debenedetti PG, James Link A., Biophys J 99(9), 2010
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Stochastic Proximity Embedding: Methods and Applications.
Agrafiotis DK, Xu H, Zhu F, Bandyopadhyay D, Liu P., Mol Inform 29(11), 2010
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Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data.
Bartenhagen C, Klein HU, Ruckert C, Jiang X, Dugas M., BMC Bioinformatics 11(), 2010
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Pattern recognition software and techniques for biological image analysis.
Shamir L, Delaney JD, Orlov N, Eckley DM, Goldberg IG., PLoS Comput Biol 6(11), 2010
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Encoding Dissimilarity Data for Statistical Model Building.
Wahba G., J Stat Plan Inference 140(12), 2010
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Self-organizing maps: a tool to ascertain taxonomic relatedness based on features derived from 16S rDNA sequence.
Raje DV, Purohit HJ, Badhe YP, Tambe SS, Kulkarni BD., J Biosci 35(4), 2010
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Rhythmic dynamics and synchronization via dimensionality reduction: application to human gait.
Zhang J, Zhang K, Feng J, Small M., PLoS Comput Biol 6(12), 2010
PMID: 21187907
Activation of the cholinergic system endows compositional properties to striatal cell assemblies.
Carrillo-Reid L, Tecuapetla F, Ibáñez-Sandoval O, Hernández-Cruz A, Galarraga E, Bargas J., J Neurophysiol 101(2), 2009
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Correlative linear neighborhood propagation for video annotation.
Tang J, Hua XS, Wang M, Gu Z, Qi GJ, Wu X., IEEE Trans Syst Man Cybern B Cybern 39(2), 2009
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A volume-based heat-diffusion classifier.
Yang H, Lyu MR, King I., IEEE Trans Syst Man Cybern B Cybern 39(2), 2009
PMID: 19095552
Ubiquitously supervised subspace learning.
Yang J, Yan S, Huang TS., IEEE Trans Image Process 18(2), 2009
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Incremental isometric embedding of high-dimensional data using connected neighborhood graphs.
Zhao D, Yang L., IEEE Trans Pattern Anal Mach Intell 31(1), 2009
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Efficient recognition of highly similar 3D objects in range images.
Chen H, Bhanu B., IEEE Trans Pattern Anal Mach Intell 31(1), 2009
PMID: 19029555
Synchronized submanifold embedding for person-independent pose estimation and beyond.
Yan S, Wang H, Fu Y, Yan X, Huang TS., IEEE Trans Image Process 18(1), 2009
PMID: 19068429
Pattern discovery in expression profiling data.
Katagiri F, Glazebrook J., Curr Protoc Mol Biol Chapter 22(), 2009
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Prototype classification: insights from machine learning.
Graf AB, Bousquet O, Rätsch G, Schölkopf B., Neural Comput 21(1), 2009
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Computational Models for Neuromuscular Function.
Valero-Cuevas FJ, Hoffmann H, Kurse MU, Kutch JJ, Theodorou EA., IEEE Rev Biomed Eng 2(), 2009
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Shape, size, and robustness: feasible regions in the parameter space of biochemical networks.
Dayarian A, Chaves M, Sontag ED, Sengupta AM., PLoS Comput Biol 5(1), 2009
PMID: 19119410
Nonlinear dimensionality reduction by locally linear inlaying.
Hou Y, Zhang P, Xu X, Zhang X, Li W., IEEE Trans Neural Netw 20(2), 2009
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G-protein coupled receptor signaling architecture of mammalian immune cells.
Polouliakh N, Nock R, Nielsen F, Kitano H., PLoS One 4(1), 2009
PMID: 19142232
Manifold-based learning and synthesis.
Huang D, Yi Z, Pu X., IEEE Trans Syst Man Cybern B Cybern 39(3), 2009
PMID: 19174353
Markerless gating for lung cancer radiotherapy based on machine learning techniques.
Lin T, Li R, Tang X, Dy JG, Jiang SB., Phys Med Biol 54(6), 2009
PMID: 19229098
Multiscale modeling of emergent materials: biological and soft matter.
Murtola T, Bunker A, Vattulainen I, Deserno M, Karttunen M., Phys Chem Chem Phys 11(12), 2009
PMID: 19279999
Tracking people on a torus.
Elgammal A, Lee CS., IEEE Trans Pattern Anal Mach Intell 31(3), 2009
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Glimmer: multilevel MDS on the GPU.
Ingram S, Munzner T, Olano M., IEEE Trans Vis Comput Graph 15(2), 2009
PMID: 19147889
Steady-state kinetic modeling constrains cellular resting states and dynamic behavior.
Purvis JE, Radhakrishnan R, Diamond SL., PLoS Comput Biol 5(3), 2009
PMID: 19266013
Dimensionality reduction oriented toward the feature visualization for ischemia detection.
Delgado-Trejos E, Perera-Lluna A, Vallverdú-Ferrer M, Caminal-Magrans P, Castellanos-Domínguez G., IEEE Trans Inf Technol Biomed 13(4), 2009
PMID: 19304491
Personalized X-ray 3-D reconstruction of the scoliotic spine from hybrid statistical and image-based models.
Kadoury S, Cheriet F, Labelle H., IEEE Trans Med Imaging 28(9), 2009
PMID: 19336299
Head pose estimation in computer vision: a survey.
Murphy-Chutorian E, Trivedi MM., IEEE Trans Pattern Anal Mach Intell 31(4), 2009
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Topological methods for exploring low-density states in biomolecular folding pathways.
Yao Y, Sun J, Huang X, Bowman GR, Singh G, Lesnick M, Guibas LJ, Pande VS, Carlsson G., J Chem Phys 130(14), 2009
PMID: 19368437
Gaussian-process factor analysis for low-dimensional single-trial analysis of neural population activity.
Yu BM, Cunningham JP, Santhanam G, Ryu SI, Shenoy KV, Sahani M., J Neurophysiol 102(1), 2009
PMID: 19357332
Exploiting motion correlations in 3-D articulated human motion tracking.
Xu X, Li B., IEEE Trans Image Process 18(6), 2009
PMID: 19369156
Distribution-based dimensionality reduction applied to articulated motion recognition.
Nayak S, Sarkar S, Loeding B., IEEE Trans Pattern Anal Mach Intell 31(5), 2009
PMID: 19299856
Image denoising using mixtures of projected Gaussian Scale Mixtures.
Goossens B, Pizurica A, Philips W., IEEE Trans Image Process 18(8), 2009
PMID: 19414286
Trabecular bone analysis in CT and X-ray images of the proximal femur for the assessment of local bone quality.
Fritscher K, Grunerbl A, Hanni M, Suhm N, Hengg C, Schubert R., IEEE Trans Med Imaging 28(10), 2009
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Linear neighborhood propagation and its applications.
Wang J, Wang F, Zhang C, Shen HC, Quan L., IEEE Trans Pattern Anal Mach Intell 31(9), 2009
PMID: 19574621
In-TFT-array-process micro defect inspection using nonlinear principal component analysis.
Liu YH, Wang CK, Ting Y, Lin WZ, Kang ZH, Chen CS, Hwang JS., Int J Mol Sci 10(10), 2009
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FINE: fisher information nonparametric embedding.
Carter KM, Raich R, Finn WG, Hero AO., IEEE Trans Pattern Anal Mach Intell 31(11), 2009
PMID: 19762935
Statistical challenges of high-dimensional data.
Johnstone IM, Titterington DM., Philos Trans A Math Phys Eng Sci 367(1906), 2009
PMID: 19805443
Exemplar-based visualization of large document corpus.
Chen Y, Wang L, Dong M, Hua J., IEEE Trans Vis Comput Graph 15(6), 2009
PMID: 19834185
Applying manifold learning to plotting approximate contour trees.
Takahashi S, Fujishiro I, Okada M., IEEE Trans Vis Comput Graph 15(6), 2009
PMID: 19834188
Fast similarity search for learned metrics.
Kulis B, Jain P, Grauman K., IEEE Trans Pattern Anal Mach Intell 31(12), 2009
PMID: 19834137
Sensor noise suppression.
de Cheveigné A, Simon JZ., J Neurosci Methods 168(1), 2008
PMID: 17963844
Predicting the shapes of bones at a joint: application to the shoulder.
Yang YM, Rueckert D, Bull AM., Comput Methods Biomech Biomed Engin 11(1), 2008
PMID: 17943483
BoostMap: an embedding method for efficient nearest neighbor retrieval.
Athitsos V, Alon J, Sclaroff S, Kollios G., IEEE Trans Pattern Anal Mach Intell 30(1), 2008
PMID: 18000327
Diffusion maps clustering for magnetic resonance q-ball imaging segmentation.
Wassermann D, Descoteaux M, Deriche R., Int J Biomed Imaging 2008(), 2008
PMID: 18317506
A comprehensive segmentation, registration, and cancer detection scheme on 3 Tesla in vivo prostate DCE-MRI.
Viswanath S, Bloch BN, Genega E, Rofsky N, Lenkinski R, Chappelow J, Toth R, Madabhushi A., Med Image Comput Comput Assist Interv 11(pt 1), 2008
PMID: 18979803
Modular Toolkit for Data Processing (MDP): A Python Data Processing Framework.
Zito T, Wilbert N, Wiskott L, Berkes P., Front Neuroinform 2(), 2008
PMID: 19169361
REDUS: Finding Reducible Subspaces in High Dimensional Data.
Zhang X, Pan F, Wang W., Proc ACM Int Conf Inf Knowl Manag 2008(), 2008
PMID: 20689667
Encoding network states by striatal cell assemblies.
Carrillo-Reid L, Tecuapetla F, Tapia D, Hernández-Cruz A, Galarraga E, Drucker-Colin R, Bargas J., J Neurophysiol 99(3), 2008
PMID: 18184883
Gaussian process dynamical models for human motion.
Wang JM, Fleet DJ, Hertzmann A., IEEE Trans Pattern Anal Mach Intell 30(2), 2008
PMID: 18084059
Estimating effective degrees of freedom in motor systems.
Clewley RH, Guckenheimer JM, Valero-Cuevas FJ., IEEE Trans Biomed Eng 55(2 pt 1), 2008
PMID: 18269978
Manifold parametrizations by eigenfunctions of the Laplacian and heat kernels.
Jones PW, Maggioni M, Schul R., Proc Natl Acad Sci U S A 105(6), 2008
PMID: 18258744
A sensorimotor approach to sound localization.
Aytekin M, Moss CF, Simon JZ., Neural Comput 20(3), 2008
PMID: 18045018
Discriminant locally linear embedding with high-order tensor data.
Li X, Lin S, Yan S, Xu D., IEEE Trans Syst Man Cybern B Cybern 38(2), 2008
PMID: 18348919
Topology preserving non-negative matrix factorization for face recognition.
Zhang T, Fang B, Tang YY, He G, Wen J., IEEE Trans Image Process 17(4), 2008
PMID: 18390365
Locality-preserved maximum information projection.
Wang H, Chen S, Hu Z, Zheng W., IEEE Trans Neural Netw 19(4), 2008
PMID: 18390305
Riemannian manifold learning.
Lin T, Zha H., IEEE Trans Pattern Anal Mach Intell 30(5), 2008
PMID: 18369250
Image-based human age estimation by manifold learning and locally adjusted robust regression.
Guo G, Fu Y, Dyer CR, Huang TS., IEEE Trans Image Process 17(7), 2008
PMID: 18586625
Investigating the efficacy of nonlinear dimensionality reduction schemes in classifying gene and protein expression studies.
Lee G, Rodriguez C, Madabhushi A., IEEE/ACM Trans Comput Biol Bioinform 5(3), 2008
PMID: 18670041
A remark on global positioning from local distances.
Singer A., Proc Natl Acad Sci U S A 105(28), 2008
PMID: 18621694
Twin kernel embedding.
Guo Y, Gao J, Kwan PW., IEEE Trans Pattern Anal Mach Intell 30(8), 2008
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Nonlinear dimensionality reduction of data lying on the multicluster manifold.
Meng D, Leung Y, Fung T, Xu Z., IEEE Trans Syst Man Cybern B Cybern 38(4), 2008
PMID: 18632401
Algorithmic dimensionality reduction for molecular structure analysis.
Brown WM, Martin S, Pollock SN, Coutsias EA, Watson JP., J Chem Phys 129(6), 2008
PMID: 18715062
Model-driven segmentation of articulating humans in Laplacian Eigenspace.
Sundaresan A, Chellappa R., IEEE Trans Pattern Anal Mach Intell 30(10), 2008
PMID: 18703830
Graph Laplacian tomography from unknown random projections.
Coifman RR, Shkolnisky Y, Sigworth FJ, Singer A., IEEE Trans Image Process 17(10), 2008
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Reconstruction Using Witness Complexes.
Guibas LJ, Oudot SY., Discrete Comput Geom 40(3), 2008
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Perturbational formulation of principal component analysis in molecular dynamics simulation.
Koyama YM, Kobayashi TJ, Tomoda S, Ueda HR., Phys Rev E Stat Nonlin Soft Matter Phys 78(4 pt 2), 2008
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Boosting method for local learning in statistical pattern recognition.
Kawakita M, Eguchi S., Neural Comput 20(11), 2008
PMID: 18533822
Representational similarity analysis - connecting the branches of systems neuroscience.
Kriegeskorte N, Mur M, Bandettini P., Front Syst Neurosci 2(), 2008
PMID: 19104670
Correlation metric for generalized feature extraction.
Fu Y, Yan S, Huang TS., IEEE Trans Pattern Anal Mach Intell 30(12), 2008
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Head yaw estimation from asymmetry of facial appearance.
Ma B, Shan S, Chen X, Gao W., IEEE Trans Syst Man Cybern B Cybern 38(6), 2008
PMID: 19022722
Transferring of speech movements from video to 3D face space.
Pei Y, Zha H., IEEE Trans Vis Comput Graph 13(1), 2007
PMID: 17093336
Graph embedding and extensions: a general framework for dimensionality reduction.
Yan S, Xu D, Zhang B, Zhang HJ, Yang Q, Lin S., IEEE Trans Pattern Anal Mach Intell 29(1), 2007
PMID: 17108382
A new approach of data clustering using a flock of agents.
Picarougne F, Azzag H, Venturini G, Guinot C., Evol Comput 15(3), 2007
PMID: 17705782
High throughput analysis of breast cancer specimens on the grid.
Yang L, Chen W, Meer P, Salaru G, Feldman MD, Foran DJ., Med Image Comput Comput Assist Interv 10(pt 1), 2007
PMID: 18051110
Globally maximizing, locally minimizing: unsupervised discriminant projection with applications to face and palm biometrics.
Yang J, Zhang D, Yang JY, Niu B., IEEE Trans Pattern Anal Mach Intell 29(4), 2007
PMID: 17299222
Estimates of the information content and dimensionality of natural scenes from proximity distributions.
Chandler DM, Field DJ., J Opt Soc Am A Opt Image Sci Vis 24(4), 2007
PMID: 17361279
Nutrigenomics: concepts and applications to pharmacogenomics and clinical medicine.
Kaput J, Perlina A, Hatipoglu B, Bartholomew A, Nikolsky Y., Pharmacogenomics 8(4), 2007
PMID: 17391074
Interactive image segmentation via adaptive weighted distances.
Protiere A, Sapiro G., IEEE Trans Image Process 16(4), 2007
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Variable-free exploration of stochastic models: a gene regulatory network example.
Erban R, Frewen TA, Wang X, Elston TC, Coifman R, Nadler B, Kevrekidis IG., J Chem Phys 126(15), 2007
PMID: 17461667
A generic framework for tracking using particle filter with dynamic shape prior.
Rathi Y, Vaswani N, Tannenbaum A., IEEE Trans Image Process 16(5), 2007
PMID: 17491466
Calculation of the free energy and cooperativity of protein folding.
Kentsis A, Gindin T, Mezei M, Osman R., PLoS One 2(5), 2007
PMID: 17505540
Fast and reliable analysis of molecular motion using proximity relations and dimensionality reduction.
Plaku E, Stamati H, Clementi C, Kavraki LE., Proteins 67(4), 2007
PMID: 17380507
Learning and matching of dynamic shape manifolds for human action recognition.
Wang L, Suter D., IEEE Trans Image Process 16(6), 2007
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Defining functional distance using manifold embeddings of gene ontology annotations.
Lerman G, Shakhnovich BE., Proc Natl Acad Sci U S A 104(27), 2007
PMID: 17595300
Untangling invariant object recognition.
DiCarlo JJ, Cox DD., Trends Cogn Sci 11(8), 2007
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Information discriminant analysis: feature extraction with an information-theoretic objective.
Nenadic Z., IEEE Trans Pattern Anal Mach Intell 29(8), 2007
PMID: 17568143
Surface deformation models for nonrigid 3D shape recovery.
Salzmann M, Pilet J, Ilic S, Fua P., IEEE Trans Pattern Anal Mach Intell 29(8), 2007
PMID: 17568151
Comparison of quantitative methods for cell-shape analysis.
Pincus Z, Theriot JA., J Microsc 227(pt 2), 2007
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Parametric embedding for class visualization.
Iwata T, Saito K, Ueda N, Stromsten S, Griffiths TL, Tenenbaum JB., Neural Comput 19(9), 2007
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DD-HDS: A method for visualization and exploration of high-dimensional data.
Lespinats S, Verleysen M, Giron A, Fertil B., IEEE Trans Neural Netw 18(5), 2007
PMID: 18220179
Learning to transform time series with a few examples.
Rahimi A, Recht B, Darrell T., IEEE Trans Pattern Anal Mach Intell 29(10), 2007
PMID: 17699921
Techniques for extracting single-trial activity patterns from large-scale neural recordings.
Churchland MM, Yu BM, Sahani M, Shenoy KV., Curr Opin Neurobiol 17(5), 2007
PMID: 18093826
Clustering and embedding using commute times.
Qiu HJ, Hancock ER., IEEE Trans Pattern Anal Mach Intell 29(11), 2007
PMID: 17848771
Marginal Fisher analysis and its variants for human gait recognition and content- based image retrieval.
Xu D, Yan S, Tao D, Lin S, Zhang HJ., IEEE Trans Image Process 16(11), 2007
PMID: 17990757
A mathematical tool for exploring the dynamics of biological networks.
Barbano PE, Spivak M, Flajolet M, Nairn AC, Greengard P, Greengard L., Proc Natl Acad Sci U S A 104(49), 2007
PMID: 18032599
Orthogonal neighborhood preserving projections: a projection-based dimensionality reduction technique.
Kokiopoulou E, Saad Y., IEEE Trans Pattern Anal Mach Intell 29(12), 2007
PMID: 17934224
Estimation of the intrinsic dimensionality of fMRI data.
Cordes D, Nandy RR., Neuroimage 29(1), 2006
PMID: 16202626
Application of compression-based distance measures to protein sequence classification: a methodological study.
Kocsor A, Kertész-Farkas A, Kaján L, Pongor S., Bioinformatics 22(4), 2006
PMID: 16317070
Generalized multidimensional scaling: a framework for isometry-invariant partial surface matching.
Bronstein AM, Bronstein MM, Kimmel R., Proc Natl Acad Sci U S A 103(5), 2006
PMID: 16432211
Spectral embedding finds meaningful (relevant) structure in image and microarray data.
Higgs BW, Weller J, Solka JL., BMC Bioinformatics 7(), 2006
PMID: 16483359
From crawling to cognition: analyzing the dynamical interactions among populations of neurons.
Briggman KL, Abarbanel HD, Kristan WB., Curr Opin Neurobiol 16(2), 2006
PMID: 16564165
Metric learning for text documents.
Lebanon G., IEEE Trans Pattern Anal Mach Intell 28(4), 2006
PMID: 16566500
Sparse representation for coarse and fine object recognition.
Pham TV, Smeulders AW., IEEE Trans Pattern Anal Mach Intell 28(4), 2006
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Some Results on Mean Square Error for Factor Score Prediction.
Krijnen WP., Psychometrika 71(2), 2006
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Local multidimensional scaling.
Venna J, Kaski S., Neural Netw 19(6-7), 2006
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Online data visualization using the neural gas network.
Estévez PA, Figueroa CJ., Neural Netw 19(6-7), 2006
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Local dimensionality reduction and supervised learning within natural clusters for biomedical data analysis.
Pechenizkiy M, Tsymbal A, Puuronen S., IEEE Trans Inf Technol Biomed 10(3), 2006
PMID: 16871722
Font adaptive word indexing of modern printed documents.
Marinai S, Marino E, Soda G., IEEE Trans Pattern Anal Mach Intell 28(8), 2006
PMID: 16886856
Learning nonlinear image manifolds by global alignment of local linear models.
Verbeek J., IEEE Trans Pattern Anal Mach Intell 28(8), 2006
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Encoding and decoding of overlapping odor sequences.
Broome BM, Jayaraman V, Laurent G., Neuron 51(4), 2006
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Nonlocal estimation of manifold structure.
Bengio Y, Monperrus M, Larochelle H., Neural Comput 18(10), 2006
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Kalman filtering for disease-state estimation from microarray data.
Kelemen JZ, Kertész-Farkas A, Kocsor A, Puskás LG., Bioinformatics 22(24), 2006
PMID: 17065158
Data fusion and multicue data matching by diffusion maps.
Lafon S, Keller Y, Coifman RR., IEEE Trans Pattern Anal Mach Intell 28(11), 2006
PMID: 17063683
High-dimensional visual analytics: interactive exploration guided by pairwise views of point distributions.
Wilkinson L, Anand A, Grossman R., IEEE Trans Vis Comput Graph 12(6), 2006
PMID: 17073361
Orthogonal laplacianfaces for face recognition.
Cai D, He X, Han J, Zhang HJ., IEEE Trans Image Process 15(11), 2006
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Olfactory coding: when smells collide.
Antolin S, Jefferis GS., Curr Biol 16(23), 2006
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SLLE for predicting membrane protein types.
Wang M, Yang J, Xu ZJ, Chou KC., J Theor Biol 232(1), 2005
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Bilinear sparse coding for invariant vision.
Grimes DB, Rao RP., Neural Comput 17(1), 2005
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Face recognition using laplacianfaces.
He X, Yan S, Hu Y, Niyogi P, Zhang HJ., IEEE Trans Pattern Anal Mach Intell 27(3), 2005
PMID: 15747789
Model-based segmentation of medical imagery by matching distributions.
Freedman D, Radke RJ, Zhang T, Jeong Y, Lovelock DM, Chen GT., IEEE Trans Med Imaging 24(3), 2005
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Hippocampal shape analysis using medial surfaces.
Bouix S, Pruessner JC, Louis Collins D, Siddiqi K., Neuroimage 25(4), 2005
PMID: 15850726
Survey of clustering algorithms.
Xu R, Wunsch D., IEEE Trans Neural Netw 16(3), 2005
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Detail preserving reproduction of color images for monochromats and dichromats.
Rasche K, Geist R, Westall J., IEEE Comput Graph Appl 25(3), 2005
PMID: 15943086
Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.
Coifman RR, Lafon S, Lee AB, Maggioni M, Nadler B, Warner F, Zucker SW., Proc Natl Acad Sci U S A 102(21), 2005
PMID: 15899970
Kernel pooled local subspaces for classification.
Zhang P, Peng J, Domeniconi C., IEEE Trans Syst Man Cybern B Cybern 35(3), 2005
PMID: 15971917
Cross-entropy embedding of high-dimensional data using the neural gas model.
Estévez PA, Figueroa CJ, Saito K., Neural Netw 18(5-6), 2005
PMID: 16087314
CLUE: cluster-based retrieval of images by unsupervised learning.
Chen Y, Wang JZ, Krovetz R., IEEE Trans Image Process 14(8), 2005
PMID: 16121465
Non-linear PCA: a missing data approach.
Scholz M, Kaplan F, Guy CL, Kopka J, Selbig J., Bioinformatics 21(20), 2005
PMID: 16109748
Principal surfaces from unsupervised kernel regression.
Meinicke P, Klanke S, Memisevic R, Ritter H., IEEE Trans Pattern Anal Mach Intell 27(9), 2005
PMID: 16173183
A tool for the quantitative spatial analysis of complex cellular systems.
Fernandez-Gonzalez R, Barcellos-Hoff MH, Ortiz-de-Solórzano C., IEEE Trans Image Process 14(9), 2005
PMID: 16190466
Geometric diffusions for the analysis of data from sensor networks.
Coifman RR, Maggioni M, Zucker SW, Kevrekidis IG., Curr Opin Neurobiol 15(5), 2005
PMID: 16150587
MetricMap: an embedding technique for processing distance-based queries in metric spaces.
Wang JT, Wang X, Shasha D, Zhang K., IEEE Trans Syst Man Cybern B Cybern 35(5), 2005
PMID: 16240772
Incremental online learning in high dimensions.
Vijayakumar S, D'Souza A, Schaal S., Neural Comput 17(12), 2005
PMID: 16212764
Supervised nonlinear dimensionality reduction for visualization and classification.
Geng X, Zhan DC, Zhou ZH., IEEE Trans Syst Man Cybern B Cybern 35(6), 2005
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Protein ranking: from local to global structure in the protein similarity network.
Weston J, Elisseeff A, Zhou D, Leslie CS, Noble WS., Proc Natl Acad Sci U S A 101(17), 2004
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Temporal dynamics of shape analysis in macaque visual area V2.
Hegdé J, Van Essen DC., J Neurophysiol 92(5), 2004
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Blind normalization of speech from different channels.
Levina DN., J Acoust Soc Am 116(1), 2004
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Locally linear embedding for dimensionality reduction in QSAR.
L'Heureux PJ, Carreau J, Bengio Y, Delalleau O, Yue SY., J Comput Aided Mol Des 18(7-9), 2004
PMID: 15729847
Volatile metabolic monitoring of glycemic status in diabetes using electronic olfaction.
Dalton P, Gelperin A, Preti G., Diabetes Technol Ther 6(4), 2004
PMID: 15321012
Learning eigenfunctions links spectral embedding and kernel PCA.
Bengio Y, Delalleau O, Le Roux N, Paiement JF, Vincent P, Ouimet M., Neural Comput 16(10), 2004
PMID: 15333211
Self-organizing maps and clustering methods for matrix data.
Seo S, Obermayer K., Neural Netw 17(8-9), 2004
PMID: 15555862
The pre-image problem in kernel methods.
Kwok JT, Tsang IW., IEEE Trans Neural Netw 15(6), 2004
PMID: 15565778
Understanding protein flexibility through dimensionality reduction.
Teodoro ML, Phillips GN, Kavraki LE., J Comput Biol 10(3-4), 2003
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Hessian eigenmaps: locally linear embedding techniques for high-dimensional data.
Donoho DL, Grimes C., Proc Natl Acad Sci U S A 100(10), 2003
PMID: 16576753
Independent spectral representations of images for recognition.
Liu X, Cheng L., J Opt Soc Am A Opt Image Sci Vis 20(7), 2003
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Exploring the nonlinear geometry of protein homology.
Farnum MA, Xu H, Agrafiotis DK., Protein Sci 12(8), 2003
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Computation in a single neuron: Hodgkin and Huxley revisited.
Agüera y Arcas B, Fairhall AL, Bialek W., Neural Comput 15(8), 2003
PMID: 14511510
Is there something out there? Inferring space from sensorimotor dependencies.
Philipona D, O'Regan JK, Nadal JP., Neural Comput 15(9), 2003
PMID: 12959664
Intensity versus identity coding in an olfactory system.
Stopfer M, Jayaraman V, Laurent G., Neuron 39(6), 2003
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A modified update rule for stochastic proximity embedding.
Rassokhin DN, Agrafiotis DK., J Mol Graph Model 22(2), 2003
PMID: 12932784
Transition path sampling: throwing ropes over rough mountain passes, in the dark.
Bolhuis PG, Chandler D, Dellago C, Geissler PL., Annu Rev Phys Chem 53(), 2002
PMID: 11972010
Sensor-independent stimulus representations.
Levin DN., Proc Natl Acad Sci U S A 99(11), 2002
PMID: 12032285
Data visualisation and manifold mapping using the ViSOM.
Yin H., Neural Netw 15(8-9), 2002
PMID: 12416690
A self-organizing principle for learning nonlinear manifolds.
Agrafiotis DK, Xu H., Proc Natl Acad Sci U S A 99(25), 2002
PMID: 12444256
Inferotemporal neurons represent low-dimensional configurations of parameterized shapes.
Op de Beeck H, Wagemans J, Vogels R., Nat Neurosci 4(12), 2001
PMID: 11713468

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