Quantification of Cell Infection Caused by Listeria monocytogenes Invasion
Arif M, Rajpoot N, Technow U, Chakraborty T, Fisch N, Jensen NA, Niehaus K, Nattkemper TW (2011)
Journal of Biotechnology 154(1): 76-83.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
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Autor*in
Arif, Muhammad;
Rajpoot, Nasir;
Technow, Ulrike;
Chakraborty, Trinad;
Fisch, Nicole;
Jensen, Nickels A.;
Niehaus, KarstenUniBi;
Nattkemper, Tim WilhelmUniBi
Einrichtung
Centrum für Biotechnologie > Institut für Genomforschung und Systembiologie
Centrum für Biotechnologie > Institut für Bioinformatik
Technische Fakultät > AG Biodata Mining
Centrum für Biotechnologie > Arbeitsgruppe T. Nattkemper
Fakultät für Biologie
Centrum für Biotechnologie > Arbeitsgruppe K. Niehaus
Center of Excellence - Cognitive Interaction Technology CITEC
Centrum für Biotechnologie > Institut für Bioinformatik
Technische Fakultät > AG Biodata Mining
Centrum für Biotechnologie > Arbeitsgruppe T. Nattkemper
Fakultät für Biologie
Centrum für Biotechnologie > Arbeitsgruppe K. Niehaus
Center of Excellence - Cognitive Interaction Technology CITEC
Abstract / Bemerkung
Listeria monocytogenes causes a life-threatening food-borne disease known as Listeriosis. Elderly, immunocompromised, and pregnant women are primarily the victims of this facultative intracellular Gram-positive pathogen. Since the bacteria survive intracellularly within the human host cells they are protected against the immune system and poorly accessed by many antibiotics. In order to screen pharmaceutical substances for their ability to interfere with the infection, persistence and release of L. monocytogenes a high content assay is required. We established a high content screen (HCS) using the RAW 264.7 mouse macrophage cell line seeded into 96-well glass bottom microplates. Cells were infected with GFP-expressing L. monocytogenes and stained thereafter with Hoechst 33342. Automated image acquisition was carried out by the ScanR screening station. We have developed an algorithm that automatically grades cells in microscopy images of fluorescent-tagged Listeria for the severity of infection. The grading accuracy of this newly developed algorithm is 97.1% as compared to a 74.3% grading accuracy we obtained using the commercial Olympus ScanR software.
Stichworte
Listeria monocytogenes;
Bioimage informatics;
High content screen;
Bacterial infection;
Pattern recognition;
Cell segmentation
Erscheinungsjahr
2011
Zeitschriftentitel
Journal of Biotechnology
Band
154
Ausgabe
1
Seite(n)
76-83
ISSN
0168-1656
Page URI
https://pub.uni-bielefeld.de/record/2300102
Zitieren
Arif M, Rajpoot N, Technow U, et al. Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology. 2011;154(1):76-83.
Arif, M., Rajpoot, N., Technow, U., Chakraborty, T., Fisch, N., Jensen, N. A., Niehaus, K., et al. (2011). Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology, 154(1), 76-83. https://doi.org/10.1016/j.jbiotec.2011.03.008
Arif, Muhammad, Rajpoot, Nasir, Technow, Ulrike, Chakraborty, Trinad, Fisch, Nicole, Jensen, Nickels A., Niehaus, Karsten, and Nattkemper, Tim Wilhelm. 2011. “Quantification of Cell Infection Caused by Listeria monocytogenes Invasion”. Journal of Biotechnology 154 (1): 76-83.
Arif, M., Rajpoot, N., Technow, U., Chakraborty, T., Fisch, N., Jensen, N. A., Niehaus, K., and Nattkemper, T. W. (2011). Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology 154, 76-83.
Arif, M., et al., 2011. Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology, 154(1), p 76-83.
M. Arif, et al., “Quantification of Cell Infection Caused by Listeria monocytogenes Invasion”, Journal of Biotechnology, vol. 154, 2011, pp. 76-83.
Arif, M., Rajpoot, N., Technow, U., Chakraborty, T., Fisch, N., Jensen, N.A., Niehaus, K., Nattkemper, T.W.: Quantification of Cell Infection Caused by Listeria monocytogenes Invasion. Journal of Biotechnology. 154, 76-83 (2011).
Arif, Muhammad, Rajpoot, Nasir, Technow, Ulrike, Chakraborty, Trinad, Fisch, Nicole, Jensen, Nickels A., Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “Quantification of Cell Infection Caused by Listeria monocytogenes Invasion”. Journal of Biotechnology 154.1 (2011): 76-83.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
2 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
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Anderson QL, Revtovich AV, Kirienko NV., J Vis Exp (137), 2018
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Schmid M, Dufner B, Dürk J, Bedal K, Stricker K, Prokoph LA, Koch C, Wege AK, Zirpel H, van Zandbergen G, Ecker R, Boghiu B, Ritter U., PLoS One 10(10), 2015
PMID: 26488169
Schmid M, Dufner B, Dürk J, Bedal K, Stricker K, Prokoph LA, Koch C, Wege AK, Zirpel H, van Zandbergen G, Ecker R, Boghiu B, Ritter U., PLoS One 10(10), 2015
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