Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1
Smits THM, Rezzonico F, Kamber T, Goesmann A, Ishimaru CA, Stockwell VO, Frey JE, Duffy B (2010)
Journal of Bacteriology 192(24): 6486-6487.
Zeitschriftenaufsatz
| Veröffentlicht | Englisch
Download
Es wurden keine Dateien hochgeladen. Nur Publikationsnachweis!
Autor*in
Smits, Theo H. M.;
Rezzonico, Fabio;
Kamber, Tim;
Goesmann, AlexanderUniBi ;
Ishimaru, Carol A.;
Stockwell, Virginia O.;
Frey, Juerg E.;
Duffy, Brion
Einrichtung
Abstract / Bemerkung
Pantoea vagans is a Gram-negative enterobacterial plant epiphyte of a broad range of plants. Here we report the 4.89-Mb genome sequence of P. vagans strain C9-1 (formerly Pantoea agglomerans), which is commercially registered for biological control of fire blight, a disease of pear and apple trees caused by Erwinia amylovora.
Erscheinungsjahr
2010
Zeitschriftentitel
Journal of Bacteriology
Band
192
Ausgabe
24
Seite(n)
6486-6487
ISSN
0021-9193
Page URI
https://pub.uni-bielefeld.de/record/1968262
Zitieren
Smits THM, Rezzonico F, Kamber T, et al. Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1. Journal of Bacteriology. 2010;192(24):6486-6487.
Smits, T. H. M., Rezzonico, F., Kamber, T., Goesmann, A., Ishimaru, C. A., Stockwell, V. O., Frey, J. E., et al. (2010). Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1. Journal of Bacteriology, 192(24), 6486-6487. https://doi.org/10.1128/JB.01122-10
Smits, Theo H. M., Rezzonico, Fabio, Kamber, Tim, Goesmann, Alexander, Ishimaru, Carol A., Stockwell, Virginia O., Frey, Juerg E., and Duffy, Brion. 2010. “Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1”. Journal of Bacteriology 192 (24): 6486-6487.
Smits, T. H. M., Rezzonico, F., Kamber, T., Goesmann, A., Ishimaru, C. A., Stockwell, V. O., Frey, J. E., and Duffy, B. (2010). Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1. Journal of Bacteriology 192, 6486-6487.
Smits, T.H.M., et al., 2010. Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1. Journal of Bacteriology, 192(24), p 6486-6487.
T.H.M. Smits, et al., “Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1”, Journal of Bacteriology, vol. 192, 2010, pp. 6486-6487.
Smits, T.H.M., Rezzonico, F., Kamber, T., Goesmann, A., Ishimaru, C.A., Stockwell, V.O., Frey, J.E., Duffy, B.: Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1. Journal of Bacteriology. 192, 6486-6487 (2010).
Smits, Theo H. M., Rezzonico, Fabio, Kamber, Tim, Goesmann, Alexander, Ishimaru, Carol A., Stockwell, Virginia O., Frey, Juerg E., and Duffy, Brion. “Genome Sequence of the Biocontrol Agent Pantoea vagans Strain C9-1”. Journal of Bacteriology 192.24 (2010): 6486-6487.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
EMBL
4 Einträge gefunden, die diesen Artikel zitieren
Pantoea vagans C9-1 plasmid pPag2, complete sequence. (EMBL: CP001894)
Sequence length: 165693
Download in FASTA format
Sequence length: 165693
Download in FASTA format
Pantoea vagans C9-1 plasmid pPag1, complete sequence. (EMBL: CP001893)
Sequence length: 167983
Download in FASTA format
Sequence length: 167983
Download in FASTA format
Pantoea vagans C9-1, complete genome. (EMBL: CP002206)
Sequence length: 4024986
Download in FASTA format
Sequence length: 4024986
Download in FASTA format
Pantoea vagans C9-1 plasmid pPag3, complete sequence. (EMBL: CP001895)
Sequence length: 529676
Download in FASTA format
Sequence length: 529676
Download in FASTA format
UNIPROT
4590 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden
Uncharacterized protein ygfA (UNIPROT: E1SCY5)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Uncharacterized protein yhdP (UNIPROT: E1SFM9)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Metal ABC transport system, ATP-binding protein (UNIPROT: E1SGD0)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Uncharacterized protein (UNIPROT: E1SKA6)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Uncharacterized protein (UNIPROT: E1SCK4)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Peptide transport system permease protein sapB (UNIPROT: E1SE73)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
TetR-family transcriptional regulator (UNIPROT: E1SHN0)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Uncharacterized protein (UNIPROT: E1SHV7)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Uncharacterized protein (UNIPROT: E1SII7)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Aldehyde dehydrogenase (UNIPROT: E1SAD8)
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
Organism: Pantoea vagans (strain C9-1)
Download in FASTA format
43 Zitationen in Europe PMC
Daten bereitgestellt von Europe PubMed Central.
Development of a New Semi-Selective Lysine-Ornithine-Mannitol-Arginine-Charcoal Medium for the Isolation of Pantoea Species from Environmental Sources in Japan.
Kuranishi T, Sekiguchi JI, Yanagisawa I, Akiwa M, Tokuno Y., Microbes Environ 34(2), 2019
PMID: 30918162
Kuranishi T, Sekiguchi JI, Yanagisawa I, Akiwa M, Tokuno Y., Microbes Environ 34(2), 2019
PMID: 30918162
The synergistic effect of concatenation in phylogenomics: the case in Pantoea.
Palmer M, Venter SN, McTaggart AR, Coetzee MPA, Van Wyk S, Avontuur JR, Beukes CW, Fourie G, Santana QC, Van Der Nest MA, Blom J, Steenkamp ET., PeerJ 7(), 2019
PMID: 31024760
Palmer M, Venter SN, McTaggart AR, Coetzee MPA, Van Wyk S, Avontuur JR, Beukes CW, Fourie G, Santana QC, Van Der Nest MA, Blom J, Steenkamp ET., PeerJ 7(), 2019
PMID: 31024760
A Novel, Highly Related Jumbo Family of Bacteriophages That Were Isolated Against Erwinia.
Sharma R, Pielstick BA, Bell KA, Nieman TB, Stubbs OA, Yeates EL, Baltrus DA, Grose JH., Front Microbiol 10(), 2019
PMID: 31428059
Sharma R, Pielstick BA, Bell KA, Nieman TB, Stubbs OA, Yeates EL, Baltrus DA, Grose JH., Front Microbiol 10(), 2019
PMID: 31428059
Mixta gen. nov., a new genus in the Erwiniaceae.
Palmer M, Steenkamp ET, Coetzee MPA, Avontuur JR, Chan WY, van Zyl E, Blom J, Venter SN., Int J Syst Evol Microbiol 68(4), 2018
PMID: 29485394
Palmer M, Steenkamp ET, Coetzee MPA, Avontuur JR, Chan WY, van Zyl E, Blom J, Venter SN., Int J Syst Evol Microbiol 68(4), 2018
PMID: 29485394
Comparative Genomics Analysis of Plasmid pPV989-94 from a Clinical Isolate of Pantoea vagans PV989.
Xu L, Yin M, Zhu T, Liu Y, Ying Y, Lu J, Lin C, Ying J, Xu T, Ni L, Bao Q, Lu S., Int J Genomics 2018(), 2018
PMID: 29862249
Xu L, Yin M, Zhu T, Liu Y, Ying Y, Lu J, Lin C, Ying J, Xu T, Ni L, Bao Q, Lu S., Int J Genomics 2018(), 2018
PMID: 29862249
Endophytic Bacterial Community Structure and Function of Herbaceous Plants From Petroleum Hydrocarbon Contaminated and Non-contaminated Sites.
Lumactud R, Fulthorpe RR., Front Microbiol 9(), 2018
PMID: 30190710
Lumactud R, Fulthorpe RR., Front Microbiol 9(), 2018
PMID: 30190710
Screening of bacterial endophytes as potential biocontrol agents against soybean diseases.
de Almeida Lopes KB, Carpentieri-Pipolo V, Fira D, Balatti PA, López SMY, Oro TH, Stefani Pagliosa E, Degrassi G., J Appl Microbiol 125(5), 2018
PMID: 29978936
de Almeida Lopes KB, Carpentieri-Pipolo V, Fira D, Balatti PA, López SMY, Oro TH, Stefani Pagliosa E, Degrassi G., J Appl Microbiol 125(5), 2018
PMID: 29978936
Phylogenomic resolution of the bacterial genus Pantoea and its relationship with Erwinia and Tatumella.
Palmer M, Steenkamp ET, Coetzee MPA, Chan WY, van Zyl E, De Maayer P, Coutinho TA, Blom J, Smits THM, Duffy B, Venter SN., Antonie Van Leeuwenhoek 110(10), 2017
PMID: 28255640
Palmer M, Steenkamp ET, Coetzee MPA, Chan WY, van Zyl E, De Maayer P, Coutinho TA, Blom J, Smits THM, Duffy B, Venter SN., Antonie Van Leeuwenhoek 110(10), 2017
PMID: 28255640
Draft Genome Sequence of Pantoea agglomerans JM1, a Strain Isolated from Soil Polluted by Industrial Production of Beta-Lactam Antibiotics That Exhibits Valacyclovir-Like Hydrolase Activity.
Zahradník J, Plačková M, Palyzová A, Marešová H, Kyslíková E, Kyslík P., Genome Announc 5(38), 2017
PMID: 28935728
Zahradník J, Plačková M, Palyzová A, Marešová H, Kyslíková E, Kyslík P., Genome Announc 5(38), 2017
PMID: 28935728
Spatial and Temporal Variation of Cultivable Communities of Co-occurring Endophytes and Pathogens in Wheat.
Comby M, Lacoste S, Baillieul F, Profizi C, Dupont J., Front Microbiol 7(), 2016
PMID: 27065969
Comby M, Lacoste S, Baillieul F, Profizi C, Dupont J., Front Microbiol 7(), 2016
PMID: 27065969
Whole-Metagenome-Sequencing-Based Community Profiles of Vitis vinifera L. cv. Corvina Berries Withered in Two Post-harvest Conditions.
Salvetti E, Campanaro S, Campedelli I, Fracchetti F, Gobbi A, Tornielli GB, Torriani S, Felis GE., Front Microbiol 7(), 2016
PMID: 27445999
Salvetti E, Campanaro S, Campedelli I, Fracchetti F, Gobbi A, Tornielli GB, Torriani S, Felis GE., Front Microbiol 7(), 2016
PMID: 27445999
Symplasmata are a clonal, conditional, and reversible type of bacterial multicellularity.
Tecon R, Leveau JH., Sci Rep 6(), 2016
PMID: 27534795
Tecon R, Leveau JH., Sci Rep 6(), 2016
PMID: 27534795
Winding paths to simplicity: genome evolution in facultative insect symbionts.
Lo WS, Huang YY, Kuo CH., FEMS Microbiol Rev 40(6), 2016
PMID: 28204477
Lo WS, Huang YY, Kuo CH., FEMS Microbiol Rev 40(6), 2016
PMID: 28204477
Identification and regulation of a novel Citrobacter rodentium gut colonization fimbria (Gcf).
Caballero-Flores GG, Croxen MA, Martínez-Santos VI, Finlay BB, Puente JL., J Bacteriol 197(8), 2015
PMID: 25666139
Caballero-Flores GG, Croxen MA, Martínez-Santos VI, Finlay BB, Puente JL., J Bacteriol 197(8), 2015
PMID: 25666139
Draft Genome Sequence of Pantoea sp. Strain MBLJ3, Isolated in a Laboratory Environmental Control Study.
Zhang J, Hung GC, Lei H, Li T, Li B, Tsai S, Lo SC., Genome Announc 3(1), 2015
PMID: 25720687
Zhang J, Hung GC, Lei H, Li T, Li B, Tsai S, Lo SC., Genome Announc 3(1), 2015
PMID: 25720687
The genomes of closely related Pantoea ananatis maize seed endophytes having different effects on the host plant differ in secretion system genes and mobile genetic elements.
Sheibani-Tezerji R, Naveed M, Jehl MA, Sessitsch A, Rattei T, Mitter B., Front Microbiol 6(), 2015
PMID: 26029184
Sheibani-Tezerji R, Naveed M, Jehl MA, Sessitsch A, Rattei T, Mitter B., Front Microbiol 6(), 2015
PMID: 26029184
Whole-genome comparative analysis of virulence genes unveils similarities and differences between endophytes and other symbiotic bacteria.
Lòpez-Fernàndez S, Sonego P, Moretto M, Pancher M, Engelen K, Pertot I, Campisano A., Front Microbiol 6(), 2015
PMID: 26074885
Lòpez-Fernàndez S, Sonego P, Moretto M, Pancher M, Engelen K, Pertot I, Campisano A., Front Microbiol 6(), 2015
PMID: 26074885
Pantoea: insights into a highly versatile and diverse genus within the Enterobacteriaceae.
Walterson AM, Stavrinides J., FEMS Microbiol Rev 39(6), 2015
PMID: 26109597
Walterson AM, Stavrinides J., FEMS Microbiol Rev 39(6), 2015
PMID: 26109597
Draft Genomes, Phylogenetic Reconstruction, and Comparative Genomics of Two Novel Cohabiting Bacterial Symbionts Isolated from Frankliniella occidentalis.
Facey PD, Méric G, Hitchings MD, Pachebat JA, Hegarty MJ, Chen X, Morgan LV, Hoeppner JE, Whitten MM, Kirk WD, Dyson PJ, Sheppard SK, Del Sol R., Genome Biol Evol 7(8), 2015
PMID: 26185096
Facey PD, Méric G, Hitchings MD, Pachebat JA, Hegarty MJ, Chen X, Morgan LV, Hoeppner JE, Whitten MM, Kirk WD, Dyson PJ, Sheppard SK, Del Sol R., Genome Biol Evol 7(8), 2015
PMID: 26185096
Examining phylogenetic relationships of Erwinia and Pantoea species using whole genome sequence data.
Zhang Y, Qiu S., Antonie Van Leeuwenhoek 108(5), 2015
PMID: 26296376
Zhang Y, Qiu S., Antonie Van Leeuwenhoek 108(5), 2015
PMID: 26296376
Genetic islands in pome fruit pathogenic and non-pathogenic Erwinia species and related plasmids.
Llop P., Front Microbiol 6(), 2015
PMID: 26379649
Llop P., Front Microbiol 6(), 2015
PMID: 26379649
Quantitative evaluation of the host-colonizing capabilities of the enteric bacterium Pantoea using plant and insect hosts.
Nadarasah G, Stavrinides J., Microbiology 160(pt 3), 2014
PMID: 24430494
Nadarasah G, Stavrinides J., Microbiology 160(pt 3), 2014
PMID: 24430494
Analysis of the Pantoea ananatis pan-genome reveals factors underlying its ability to colonize and interact with plant, insect and vertebrate hosts.
De Maayer P, Chan WY, Rubagotti E, Venter SN, Toth IK, Birch PR, Coutinho TA., BMC Genomics 15(), 2014
PMID: 24884520
De Maayer P, Chan WY, Rubagotti E, Venter SN, Toth IK, Birch PR, Coutinho TA., BMC Genomics 15(), 2014
PMID: 24884520
Improvement of a dry formulation of Pseudomonas fluorescens EPS62e for fire blight disease biocontrol by combination of culture osmoadaptation with a freeze-drying lyoprotectant.
Cabrefiga J, Francés J, Montesinos E, Bonaterra A., J Appl Microbiol 117(4), 2014
PMID: 24947806
Cabrefiga J, Francés J, Montesinos E, Bonaterra A., J Appl Microbiol 117(4), 2014
PMID: 24947806
The impact of transition metals on bacterial plant disease.
Fones H, Preston GM., FEMS Microbiol Rev 37(4), 2013
PMID: 23020129
Fones H, Preston GM., FEMS Microbiol Rev 37(4), 2013
PMID: 23020129
Erwinia amylovora loop-mediated isothermal amplification (LAMP) assay for rapid pathogen detection and on-site diagnosis of fire blight.
Bühlmann A, Pothier JF, Rezzonico F, Smits TH, Andreou M, Boonham N, Duffy B, Frey JE., J Microbiol Methods 92(3), 2013
PMID: 23275135
Bühlmann A, Pothier JF, Rezzonico F, Smits TH, Andreou M, Boonham N, Duffy B, Frey JE., J Microbiol Methods 92(3), 2013
PMID: 23275135
Single-cell versus population-level reproductive success of bacterial immigrants to pre-colonized leaf surfaces.
Remus-Emsermann MN, Kowalchuk GA, Leveau JH., Environ Microbiol Rep 5(3), 2013
PMID: 23754719
Remus-Emsermann MN, Kowalchuk GA, Leveau JH., Environ Microbiol Rep 5(3), 2013
PMID: 23754719
Draft Genome Sequence of the Antibiotic-Producing Cystic Fibrosis Isolate Pantoea agglomerans Tx10.
Smith DD, Kirzinger MW, Stavrinides J., Genome Announc 1(5), 2013
PMID: 24179115
Smith DD, Kirzinger MW, Stavrinides J., Genome Announc 1(5), 2013
PMID: 24179115
Biological control of fire blight of apple and pear with antagonistic Lactobacillus plantarum
Roselló G, Bonaterra A, Francés J, Montesinos L, Badosa E, Montesinos E., Eur J Plant Pathol 137(3), 2013
PMID: IND500697532
Roselló G, Bonaterra A, Francés J, Montesinos L, Badosa E, Montesinos E., Eur J Plant Pathol 137(3), 2013
PMID: IND500697532
Draft Genome Sequence of the Antibiotic-Producing Epiphytic Isolate Pantoea ananatis BRT175.
Smith DD, Kirzinger MW, Stavrinides J., Genome Announc 1(6), 2013
PMID: 24201193
Smith DD, Kirzinger MW, Stavrinides J., Genome Announc 1(6), 2013
PMID: 24201193
Prospects and limitations of microbial pesticides for control of bacterial and fungal pomefruit tree diseases.
Bonaterra A, Badosa E, Cabrefiga J, Francés J, Montesinos E., Trees (Berl West) 26(1), 2012
PMID: 25983396
Bonaterra A, Badosa E, Cabrefiga J, Francés J, Montesinos E., Trees (Berl West) 26(1), 2012
PMID: 25983396
The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential.
Hara Y, Kadotani N, Izui H, Katashkina JI, Kuvaeva TM, Andreeva IG, Golubeva LI, Malko DB, Makeev VJ, Mashko SV, Kozlov YI., Appl Microbiol Biotechnol 93(1), 2012
PMID: 22159605
Hara Y, Kadotani N, Izui H, Katashkina JI, Kuvaeva TM, Andreeva IG, Golubeva LI, Malko DB, Makeev VJ, Mashko SV, Kozlov YI., Appl Microbiol Biotechnol 93(1), 2012
PMID: 22159605
Genomics and current genetic understanding of Erwinia amylovora and the fire blight antagonist Pantoea vagans
Kamber T, Smits THM, Rezzonico F, Duffy B., Trees (Berl West) 26(1), 2012
PMID: IND44798016
Kamber T, Smits THM, Rezzonico F, Duffy B., Trees (Berl West) 26(1), 2012
PMID: IND44798016
Prospects and limitations of microbial pesticides for control of bacterial and fungal pomefruit tree diseases
Bonaterra A, Badosa E, Cabrefiga J, Francés J, Montesinos E., Trees (Berl West) 26(1), 2012
PMID: IND44798018
Bonaterra A, Badosa E, Cabrefiga J, Francés J, Montesinos E., Trees (Berl West) 26(1), 2012
PMID: IND44798018
Phylogenetic classification of diverse LysR-type transcriptional regulators of a model prokaryote Geobacter sulfurreducens.
Krushkal J, Qu Y, Lovley DR, Adkins RM., J Mol Evol 74(3-4), 2012
PMID: 22526031
Krushkal J, Qu Y, Lovley DR, Adkins RM., J Mol Evol 74(3-4), 2012
PMID: 22526031
Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.
Rezzonico F, Braun-Kiewnick A, Mann RA, Rodoni B, Goesmann A, Duffy B, Smits TH., Mol Plant Pathol 13(8), 2012
PMID: 22583486
Rezzonico F, Braun-Kiewnick A, Mann RA, Rodoni B, Goesmann A, Duffy B, Smits TH., Mol Plant Pathol 13(8), 2012
PMID: 22583486
Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.
Rezzonico F, Smits TH, Duffy B., Sensors (Basel) 12(5), 2012
PMID: 22778662
Rezzonico F, Smits TH, Duffy B., Sensors (Basel) 12(5), 2012
PMID: 22778662
Fire blight: applied genomic insights of the pathogen and host.
Malnoy M, Martens S, Norelli JL, Barny MA, Sundin GW, Smits TH, Duffy B., Annu Rev Phytopathol 50(), 2012
PMID: 22702352
Malnoy M, Martens S, Norelli JL, Barny MA, Sundin GW, Smits TH, Duffy B., Annu Rev Phytopathol 50(), 2012
PMID: 22702352
The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.
De Maayer P, Chan WY, Blom J, Venter SN, Duffy B, Smits TH, Coutinho TA., BMC Genomics 13(), 2012
PMID: 23151240
De Maayer P, Chan WY, Blom J, Venter SN, Duffy B, Smits TH, Coutinho TA., BMC Genomics 13(), 2012
PMID: 23151240
Metabolic versatility and antibacterial metabolite biosynthesis are distinguishing genomic features of the fire blight antagonist Pantoea vagans C9-1.
Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Ishimaru CA, Frey JE, Stockwell VO, Duffy B., PLoS One 6(7), 2011
PMID: 21789243
Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Ishimaru CA, Frey JE, Stockwell VO, Duffy B., PLoS One 6(7), 2011
PMID: 21789243
Genomics of iron acquisition in the plant pathogen Erwinia amylovora: insights in the biosynthetic pathway of the siderophore desferrioxamine E.
Smits TH, Duffy B., Arch Microbiol 193(10), 2011
PMID: 21814817
Smits TH, Duffy B., Arch Microbiol 193(10), 2011
PMID: 21814817
Antibiosis activity of Pantoea agglomerans biocontrol strain E325 against Erwinia amylovora on apple flower stigmas.
Pusey PL, Stockwell VO, Reardon CL, Smits TH, Duffy B., Phytopathology 101(10), 2011
PMID: 21679036
Pusey PL, Stockwell VO, Reardon CL, Smits TH, Duffy B., Phytopathology 101(10), 2011
PMID: 21679036
Comparative genomics of the Type VI secretion systems of Pantoea and Erwinia species reveals the presence of putative effector islands that may be translocated by the VgrG and Hcp proteins.
De Maayer P, Venter SN, Kamber T, Duffy B, Coutinho TA, Smits TH., BMC Genomics 12(), 2011
PMID: 22115407
De Maayer P, Venter SN, Kamber T, Duffy B, Coutinho TA, Smits TH., BMC Genomics 12(), 2011
PMID: 22115407
14 References
Daten bereitgestellt von Europe PubMed Central.
CRITICA: coding region identification tool invoking comparative analysis.
Badger JH, Olsen GJ, Woese CR., Mol. Biol. Evol. 16(4), 1999
PMID: 10331277
Badger JH, Olsen GJ, Woese CR., Mol. Biol. Evol. 16(4), 1999
PMID: 10331277
Recent evolution of bacterial pathogens: the gall-forming Pantoea agglomerans case.
Barash I, Manulis-Sasson S., Annu Rev Phytopathol 47(), 2009
PMID: 19400643
Barash I, Manulis-Sasson S., Annu Rev Phytopathol 47(), 2009
PMID: 19400643
Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback.
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PR, Joubert F, Coutinho TA., J. Bacteriol. 192(11), 2010
PMID: 20348253
De Maayer P, Chan WY, Venter SN, Toth IK, Birch PR, Joubert F, Coutinho TA., J. Bacteriol. 192(11), 2010
PMID: 20348253
The presence of diverse IS elements and an avrPphD homologue that acts as a virulence factor on the pathogenicity plasmid of Erwinia herbicola pv. gypsophilae.
Guo M, Manulis S, Mor H, Barash I., Mol. Plant Microbe Interact. 15(7), 2002
PMID: 12118887
Guo M, Manulis S, Mor H, Barash I., Mol. Plant Microbe Interact. 15(7), 2002
PMID: 12118887
Multiple antibiotic production by Erwinia herbicola.
Ishimaru CA, Klos EJ, Brubaker RR., Phytopathology 78(6), 1988
PMID: IND88033164
Ishimaru CA, Klos EJ, Brubaker RR., Phytopathology 78(6), 1988
PMID: IND88033164
Management of fire blight: a case study in microbial ecology.
Johnson KB, Stockwell VO., Annu Rev Phytopathol 36(), 1998
PMID: 15012499
Johnson KB, Stockwell VO., Annu Rev Phytopathol 36(), 1998
PMID: 15012499
The KEGG databases at GenomeNet.
Kanehisa M, Goto S, Kawashima S, Nakaya A., Nucleic Acids Res. 30(1), 2002
PMID: 11752249
Kanehisa M, Goto S, Kawashima S, Nakaya A., Nucleic Acids Res. 30(1), 2002
PMID: 11752249
Development of joint application strategies for two microbial gene finders.
McHardy AC, Goesmann A, Puhler A, Meyer F., Bioinformatics 20(10), 2004
PMID: 14988122
McHardy AC, Goesmann A, Puhler A, Meyer F., Bioinformatics 20(10), 2004
PMID: 14988122
GenDB--an open source genome annotation system for prokaryote genomes.
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Meyer F, Goesmann A, McHardy AC, Bartels D, Bekel T, Clausen J, Kalinowski J, Linke B, Rupp O, Giegerich R, Puhler A., Nucleic Acids Res. 31(8), 2003
PMID: 12682369
Genotypic comparison of Pantoea agglomerans plant and clinical strains.
Rezzonico F, Smits TH, Montesinos E, Frey JE, Duffy B., BMC Microbiol. 9(), 2009
PMID: 19772624
Rezzonico F, Smits TH, Montesinos E, Frey JE, Duffy B., BMC Microbiol. 9(), 2009
PMID: 19772624
Microbial gene identification using interpolated Markov models.
Salzberg SL, Delcher AL, Kasif S, White O., Nucleic Acids Res. 26(2), 1998
PMID: 9421513
Salzberg SL, Delcher AL, Kasif S, White O., Nucleic Acids Res. 26(2), 1998
PMID: 9421513
Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.
Smits TH, Jaenicke S, Rezzonico F, Kamber T, Goesmann A, Frey JE, Duffy B., BMC Genomics 11(), 2010
PMID: 20047678
Smits TH, Jaenicke S, Rezzonico F, Kamber T, Goesmann A, Frey JE, Duffy B., BMC Genomics 11(), 2010
PMID: 20047678
Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp.
Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Frey JE, Duffy B., Mol. Plant Microbe Interact. 23(4), 2010
PMID: 20192826
Smits TH, Rezzonico F, Kamber T, Blom J, Goesmann A, Frey JE, Duffy B., Mol. Plant Microbe Interact. 23(4), 2010
PMID: 20192826
Comparative genomics reveals what makes an enterobacterial plant pathogen.
Toth IK, Pritchard L, Birch PR., Annu Rev Phytopathol 44(), 2006
PMID: 16704357
Toth IK, Pritchard L, Birch PR., Annu Rev Phytopathol 44(), 2006
PMID: 16704357
Export
Markieren/ Markierung löschen
Markierte Publikationen
Web of Science
Dieser Datensatz im Web of Science®Quellen
PMID: 20952567
PubMed | Europe PMC
Suchen in