PUB - Publikationen an der Universität Bielefeld

EMBL

34 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden

UNIPROT

15 Einträge gefunden, die diesen Artikel zitieren von denen 10 angezeigt werden

Thermodynamics and NMR of internal G.T mismatches in DNA.
Allawi HT, SantaLucia J Jr., Biochemistry 36(34), 1997
PMID: 9265640

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ., Nucleic Acids Res. 25(17), 1997
PMID: 9254694

Application of tRNA intergenic spacer PCR for identification of Enterococcus species.
Baele M, Baele P, Vaneechoutte M, Storms V, Butaye P, Devriese LA, Verschraegen G, Gillis M, Haesebrouck F., J. Clin. Microbiol. 38(11), 2000
PMID: 11060090

Automatic selection of representative proteins for bacterial phylogeny.
Bern M, Goldberg D., BMC Evol. Biol. 5(), 2005
PMID: 15927057

DNA chips for detection of bacterial pathogens
Blaskovic, Biologia 60(), 2005

Nodulation of Mimosa spp. by the beta-proteobacterium Ralstonia taiwanensis.
Chen WM, James EK, Prescott AR, Kierans M, Sprent JI., Mol. Plant Microbe Interact. 16(12), 2003
PMID: 14651338

Ralstonia taiwanensis sp. nov., isolated from root nodules of Mimosa species and sputum of a cystic fibrosis patient.
Chen WM, Laevens S, Lee TM, Coenye T, De Vos P, Mergeay M, Vandamme P., Int. J. Syst. Evol. Microbiol. 51(Pt 5), 2001
PMID: 11594603

Identification of clinically relevant viridans streptococci by an oligonucleotide array.
Chen CC, Teng LJ, Kaiung S, Chang TC., J. Clin. Microbiol. 43(4), 2005
PMID: 15814960

The genome sequence of the facultative intracellular pathogen Brucella melitensis.
DelVecchio VG, Kapatral V, Redkar RJ, Patra G, Mujer C, Los T, Ivanova N, Anderson I, Bhattacharyya A, Lykidis A, Reznik G, Jablonski L, Larsen N, D'Souza M, Bernal A, Mazur M, Goltsman E, Selkov E, Elzer PH, Hagius S, O'Callaghan D, Letesson JJ, Haselkorn R, Kyrpides N, Overbeek R., Proc. Natl. Acad. Sci. U.S.A. 99(1), 2001
PMID: 11756688

Rhizobial 16S rRNA and dnaK genes: mosaicism and the uncertain phylogenetic placement of Rhizobium galegae.
Eardly BD, Nour SM, van Berkum P, Selander RK., Appl. Environ. Microbiol. 71(3), 2005
PMID: 15746335

Corresponding 16S rRNA gene segments in Rhizobiaceae and Aeromonas yield discordant phylogenies
Eardly, Plant and Soil 186(), 1996

The RecA protein as a model molecule for molecular systematic studies of bacteria: comparison of trees of RecAs and 16S rRNAs from the same species.
Eisen JA., J. Mol. Evol. 41(6), 1995
PMID: 8587109

The composite genome of the legume symbiont Sinorhizobium meliloti.
Galibert F, Finan TM, Long SR, Puhler A, Abola P, Ampe F, Barloy-Hubler F, Barnett MJ, Becker A, Boistard P, Bothe G, Boutry M, Bowser L, Buhrmester J, Cadieu E, Capela D, Chain P, Cowie A, Davis RW, Dreano S, Federspiel NA, Fisher RF, Gloux S, Godrie T, Goffeau A, Golding B, Gouzy J, Gurjal M, Hernandez-Lucas I, Hong A, Huizar L, Hyman RW, Jones T, Kahn D, Kahn ML, Kalman S, Keating DH, Kiss E, Komp C, Lelaure V, Masuy D, Palm C, Peck MC, Pohl TM, Portetelle D, Purnelle B, Ramsperger U, Surzycki R, Thebault P, Vandenbol M, Vorholter FJ, Weidner S, Wells DH, Wong K, Yeh KC, Batut J., Science 293(5530), 2001
PMID: 11474104

Development of a new oligonucleotide array to identify staphylococcal strains at species level.
Giammarinaro P, Leroy S, Chacornac JP, Delmas J, Talon R., J. Clin. Microbiol. 43(8), 2005
PMID: 16081895

Protein coding gene sequences: alternative phylogenetic markers or possible tools to compare ecological diversity in bacteria?
Giraffa, Current Genomics 2(), 2001

Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.
Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M, Halling C, Mullin L, Houmiel K, Gordon J, Vaudin M, Iartchouk O, Epp A, Liu F, Wollam C, Allinger M, Doughty D, Scott C, Lappas C, Markelz B, Flanagan C, Crowell C, Gurson J, Lomo C, Sear C, Strub G, Cielo C, Slater S., Science 294(5550), 2001
PMID: 11743194

Potential of DNA microarrays for developing parallel detection tools (PDTs) for microorganisms relevant to biodefense and related research needs.
Hashsham SA, Wick LM, Rouillard JM, Gulari E, Tiedje JM., Biosens Bioelectron 20(4), 2004
PMID: 15522582

Complete genome structure of the nitrogen-fixing symbiotic bacterium Mesorhizobium loti.
Kaneko T, Nakamura Y, Sato S, Asamizu E, Kato T, Sasamoto S, Watanabe A, Idesawa K, Ishikawa A, Kawashima K, Kimura T, Kishida Y, Kiyokawa C, Kohara M, Matsumoto M, Matsuno A, Mochizuki Y, Nakayama S, Nakazaki N, Shimpo S, Sugimoto M, Takeuchi C, Yamada M, Tabata S., DNA Res. 7(6), 2000
PMID: 11214968

Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110.
Kaneko T, Nakamura Y, Sato S, Minamisawa K, Uchiumi T, Sasamoto S, Watanabe A, Idesawa K, Iriguchi M, Kawashima K, Kohara M, Matsumoto M, Shimpo S, Tsuruoka H, Wada T, Yamada M, Tabata S., DNA Res. 9(6), 2002
PMID: 12597275

Application of DNA microarray technology for detection, identification, and characterization of food-borne pathogens.
Kostrzynska M, Bachand A., Can. J. Microbiol. 52(1), 2006
PMID: 16541153

Oligonucleotide microarray for identification of Enterococcus species.
Lehner A, Loy A, Behr T, Gaenge H, Ludwig W, Wagner M, Schleifer KH., FEMS Microbiol. Lett. 246(1), 2005
PMID: 15869972

Comparative sequence-analysis of 23S ribosomal-RNA from Proteobacteria
Ludwig, Syst. Appl. Microbiol. 18(), 1995

AUTHOR UNKNOWN, 0

DIALIGN: multiple DNA and protein sequence alignment at BiBiServ.
Morgenstern B., Nucleic Acids Res. 32(Web Server issue), 2004
PMID: 15215344

rpoB sequence analysis as a novel basis for bacterial identification.
Mollet C, Drancourt M, Raoult D., Mol. Microbiol. 26(5), 1997
PMID: 9426137

Nodulation of legumes by members of the beta-subclass of Proteobacteria.
Moulin L, Munive A, Dreyfus B, Boivin-Masson C., Nature 411(6840), 2001
PMID: 11418858

Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
Pitcher, Lett. Appl. Microbiol. 8(), 1989

GoArrays: highly dynamic and efficient microarray probe design.
Rimour S, Hill D, Militon C, Peyret P., Bioinformatics 21(7), 2004
PMID: 15531611

Allelic diversity and population structure in Oenococcus oeni as determined from sequence analysis of housekeeping genes.
de Las Rivas B, Marcobal A, Munoz R., Appl. Environ. Microbiol. 70(12), 2004
PMID: 15574919

Cloning and sequencing of a large fragment of the Atpd-Gene of Pirellula-marine – a contribution to the phylogeny of Planctomycetales
Ronner, Endocytobiosis Cell Res. 7(), 1991

DNA microarray-based detection and identification of Chlamydia and Chlamydophila spp.
Sachse K, Hotzel H, Slickers P, Ellinger T, Ehricht R., Mol. Cell. Probes 19(1), 2004
PMID: 15652219

Diagnostic microbial microarrays in soil ecology.
Sessitsch A, Hackl E, Wenzl P, Kilian A, Kostic T, Stralis-Pavese N, Sandjong BT, Bodrossy L., New Phytol. 171(4), 2006
PMID: 16918544

Molecular interactions on microarrays.
Southern E, Mir K, Shchepinov M., Nat. Genet. 21(1 Suppl), 1999
PMID: 9915493

Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus.
Sullivan JT, Eardly BD, van Berkum P, Ronson CW., Appl. Environ. Microbiol. 62(8), 1996
PMID: 8702274

AUTHOR UNKNOWN, 0

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG., Nucleic Acids Res. 25(24), 1997
PMID: 9396791

Discordant phylogenies within the rrn loci of Rhizobia.
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD., J. Bacteriol. 185(10), 2003
PMID: 12730157

Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov., nodulate the roots of tropical legumes.
Vandamme P, Goris J, Chen WM, de Vos P, Willems A., Syst. Appl. Microbiol. 25(4), 2002
PMID: 12583710

Polyphasic taxonomy, a consensus approach to bacterial systematics.
Vandamme P, Pot B, Gillis M, de Vos P, Kersters K, Swings J., Microbiol. Rev. 60(2), 1996
PMID: 8801440

Evolutionary relationships among eubacterial groups as inferred from GroEL (chaperonin) sequence comparisons.
Viale AM, Arakaki AK, Soncini FC, Ferreyra RG., Int. J. Syst. Bacteriol. 44(3), 1994
PMID: 7520741

Molecular systematics of rhizobia based on maximum likelihood and Bayesian phylogenies inferred from rrs, atpD, recA and nifH sequences, and their use in the classification of Sesbania microsymbionts from Venezuelan wetlands.
Vinuesa P, Silva C, Lorite MJ, Izaguirre-Mayoral ML, Bedmar EJ, Martinez-Romero E., Syst. Appl. Microbiol. 28(8), 2005
PMID: 16261860

Microarray-based identification of thermophilic Campylobacter jejuni, C. coli, C. lari, and C. upsaliensis.
Volokhov D, Chizhikov V, Chumakov K, Rasooly A., J. Clin. Microbiol. 41(9), 2003
PMID: 12958228

Identification of Listeria species by microarray-based assay.
Volokhov D, Rasooly A, Chumakov K, Chizhikov V., J. Clin. Microbiol. 40(12), 2002
PMID: 12454178

Nucleic acid amplification strategies for DNA microarray-based pathogen detection.
Vora GJ, Meador CE, Stenger DA, Andreadis JD., Appl. Environ. Microbiol. 70(5), 2004
PMID: 15128566

Bacterial evolution.
Woese CR., Microbiol. Rev. 51(2), 1987
PMID: 2439888

The genome of the natural genetic engineer Agrobacterium tumefaciens C58.
Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW., Science 294(5550), 2001
PMID: 11743193

PCR amplification and direct sequencing of gyrB genes with universal primers and their application to the detection and taxonomic analysis of Pseudomonas putida strains.
Yamamoto S, Harayama S., Appl. Environ. Microbiol. 61(3), 1995
PMID: 7793912

Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes.
Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S., Microbiology (Reading, Engl.) 146 ( Pt 10)(), 2000
PMID: 11021915

Development of DNA microarray for pathogen detection
Yoo, Biotechnol. Bioprocess Eng. 9(), 2004

The genus name Ensifer Casida 1982 takes priority over Sinorhizobium Chen et al. 1988, and Sinorhizobium morelense Wang et al. 2002 is a later synonym of Ensifer adhaerens Casida 1982. Is the combination "Sinorhizobium adhaerens" (Casida 1982) Willems et al. 2003 legitimate? Request for an Opinion.
Young JM., Int. J. Syst. Evol. Microbiol. 53(Pt 6), 2003
PMID: 14657154