PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression

Pfalz J, Liere K, Kandlbinder A, Dietz K-J, Oelmüller R (2006)
PLANT CELL 18(1): 176-197.

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Transcription in plastids is mediated by a plastid-encoded multimeric (PEP) and a nuclear-encoded single-subunit RNA polymerase (NEP) and a still unknown number of nuclear-encoded factors. By combining gel filtration and affinity chromatography purification steps, we isolated transcriptionally active chromosomes from Arabidopsis thaliana and mustard (Sinapis alba) chloroplasts and identified 35 components by electrospray ionization ion trap tandem mass spectrometry. Eighteen components, called plastid transcriptionally active chromosome proteins (pTACs), have not yet been described. T-DNA insertions in three corresponding genes, ptac2, -6, and -12, are lethal without exogenous carbon sources. Expression patterns of the plastid-encoded genes in the corresponding knockout lines resemble those of Delta rpo mutants. For instance, expression of plastid genes with PEP promoters is downregulated, while expression of genes with NEP promoters is either not affected or upregulated in the mutants. All three components might also be involved in posttranscriptional processes, such as RNA processing and/or mRNA stability. Thus, pTAC2, -6, and -12 are clearly involved in plastid gene expression.
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PLANT CELL
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18
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176-197
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Pfalz J, Liere K, Kandlbinder A, Dietz K-J, Oelmüller R. PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. PLANT CELL. 2006;18(1):176-197.
Pfalz, J., Liere, K., Kandlbinder, A., Dietz, K. - J., & Oelmüller, R. (2006). PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. PLANT CELL, 18(1), 176-197. doi:10.1105/tpc.105.036392
Pfalz, J., Liere, K., Kandlbinder, A., Dietz, K. - J., and Oelmüller, R. (2006). PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. PLANT CELL 18, 176-197.
Pfalz, J., et al., 2006. PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. PLANT CELL, 18(1), p 176-197.
J. Pfalz, et al., “PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression”, PLANT CELL, vol. 18, 2006, pp. 176-197.
Pfalz, J., Liere, K., Kandlbinder, A., Dietz, K.-J., Oelmüller, R.: PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression. PLANT CELL. 18, 176-197 (2006).
Pfalz, J, Liere, K, Kandlbinder, Andrea, Dietz, Karl-Josef, and Oelmüller, R. “PTAC2,-6, and-12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression”. PLANT CELL 18.1 (2006): 176-197.

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Hofmann NR., Plant Cell 22(5), 2010
PMID: 20511298
Arabidopsis HEMERA/pTAC12 initiates photomorphogenesis by phytochromes.
Chen M, Galvão RM, Li M, Burger B, Bugea J, Bolado J, Chory J., Cell 141(7), 2010
PMID: 20603003
The repeat domain of the type III effector protein PthA shows a TPR-like structure and undergoes conformational changes upon DNA interaction.
Murakami MT, Sforça ML, Neves JL, Paiva JH, Domingues MN, Pereira AL, Zeri AC, Benedetti CE., Proteins 78(16), 2010
PMID: 20848643
Hubs and bottlenecks in plant molecular signalling networks.
Dietz KJ, Jacquot JP, Harris G., New Phytol 188(4), 2010
PMID: 20958306
Experimental analysis of the rice mitochondrial proteome, its biogenesis, and heterogeneity.
Huang S, Taylor NL, Narsai R, Eubel H, Whelan J, Millar AH., Plant Physiol 149(2), 2009
PMID: 19010998
The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth.
Zhou W, Cheng Y, Yap A, Chateigner-Boutin AL, Delannoy E, Hammani K, Small I, Huang J., Plant J 58(1), 2009
PMID: 19054358
Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts.
Okuda K, Chateigner-Boutin AL, Nakamura T, Delannoy E, Sugita M, Myouga F, Motohashi R, Shinozaki K, Small I, Shikanai T., Plant Cell 21(1), 2009
PMID: 19182104
LPA66 is required for editing psbF chloroplast transcripts in Arabidopsis.
Cai W, Ji D, Peng L, Guo J, Ma J, Zou M, Lu C, Zhang L., Plant Physiol 150(3), 2009
PMID: 19448041
A mutation in the Arabidopsis mTERF-related plastid protein SOLDAT10 activates retrograde signaling and suppresses (1)O(2)-induced cell death.
Meskauskiene R, Würsch M, Laloi C, Vidi PA, Coll NS, Kessler F, Baruah A, Kim C, Apel K., Plant J 60(3), 2009
PMID: 19563435
A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis.
Ogawa T, Nishimura K, Aoki T, Takase H, Tomizawa K, Ashida H, Yokota A., Plant Physiol 151(1), 2009
PMID: 19587101
A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life.
Haas CE, Rodionov DA, Kropat J, Malasarn D, Merchant SS, de Crécy-Lagard V., BMC Genomics 10(), 2009
PMID: 19822009
The Chlamydomonas chloroplast HLP protein is required for nucleoid organization and genome maintenance.
Karcher D, Köster D, Schadach A, Klevesath A, Bock R., Mol Plant 2(6), 2009
PMID: 19995727
An Arabidopsis homolog of the bacterial peptidoglycan synthesis enzyme MurE has an essential role in chloroplast development.
Garcia M, Myouga F, Takechi K, Sato H, Nabeshima K, Nagata N, Takio S, Shinozaki K, Takano H., Plant J 53(6), 2008
PMID: 18036201
PYK10, a beta-glucosidase located in the endoplasmatic reticulum, is crucial for the beneficial interaction between Arabidopsis thaliana and the endophytic fungus Piriformospora indica.
Sherameti I, Venus Y, Drzewiecki C, Tripathi S, Dan VM, Nitz I, Varma A, Grundler FM, Oelmüller R., Plant J 54(3), 2008
PMID: 18248598
On the expansion of the pentatricopeptide repeat gene family in plants.
O'Toole N, Hattori M, Andres C, Iida K, Lurin C, Schmitz-Linneweber C, Sugita M, Small I., Mol Biol Evol 25(6), 2008
PMID: 18343892
Overexpression of mtDNA-associated AtWhy2 compromises mitochondrial function.
Maréchal A, Parent JS, Sabar M, Véronneau-Lafortune F, Abou-Rached C, Brisson N., BMC Plant Biol 8(), 2008
PMID: 18423020
Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.
Zybailov B, Rutschow H, Friso G, Rudella A, Emanuelsson O, Sun Q, van Wijk KJ., PLoS One 3(4), 2008
PMID: 18431481
Consequences of C4 differentiation for chloroplast membrane proteomes in maize mesophyll and bundle sheath cells.
Majeran W, Zybailov B, Ytterberg AJ, Dunsmore J, Sun Q, van Wijk KJ., Mol Cell Proteomics 7(9), 2008
PMID: 18453340
A 125 kDa RNase E/G-like protein is present in plastids and is essential for chloroplast development and autotrophic growth in Arabidopsis.
Mudd EA, Sullivan S, Gisby MF, Mironov A, Kwon CS, Chung WI, Day A., J Exp Bot 59(10), 2008
PMID: 18515828
A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis.
Prikryl J, Watkins KP, Friso G, van Wijk KJ, Barkan A., Nucleic Acids Res 36(16), 2008
PMID: 18676978
CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.
Chateigner-Boutin AL, Ramos-Vega M, Guevara-García A, Andrés C, de la Luz Gutiérrez-Nava M, Cantero A, Delannoy E, Jiménez LF, Lurin C, Small I, León P., Plant J 56(4), 2008
PMID: 18657233
The role of auxins and cytokinins in the mutualistic interaction between Arabidopsis and Piriformospora indica.
Vadassery J, Ritter C, Venus Y, Camehl I, Varma A, Shahollari B, Novák O, Strnad M, Ludwig-Müller J, Oelmüller R., Mol Plant Microbe Interact 21(10), 2008
PMID: 18785832
Plastid signalling to the nucleus and beyond.
Pogson BJ, Woo NS, Förster B, Small ID., Trends Plant Sci 13(11), 2008
PMID: 18838332
A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.
Myouga F, Hosoda C, Umezawa T, Iizumi H, Kuromori T, Motohashi R, Shono Y, Nagata N, Ikeuchi M, Shinozaki K., Plant Cell 20(11), 2008
PMID: 18996978
The multifarious roles of PPR proteins in plant mitochondrial gene expression
Andrés C, Lurin C, Small ID., Physiol Plant 129(1), 2007
PMID: IND43860509
Interorganellar communication.
Pesaresi P, Schneider A, Kleine T, Leister D., Curr Opin Plant Biol 10(6), 2007
PMID: 17719262
Dual temporal role of plastid sigma factor 6 in Arabidopsis development.
Loschelder H, Schweer J, Link B, Link G., Plant Physiol 142(2), 2006
PMID: 16905663
A promoter switch that can rescue a plant sigma factor mutant.
Schweer J, Loschelder H, Link G., FEBS Lett 580(28-29), 2006
PMID: 17118361

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