Ecological genomics of marine roseobacters
Moran MA, Belas R, Schell MA, Gonzalez JM, Sun F, Sun S, Binder BJ, Edmonds J, Ye W, Orcutt B, Howard EC, et al. (2007)
APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73(14): 4559-4569.
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Autor*in
Moran, M. A.;
Belas, R.;
Schell, M. A.;
Gonzalez, J. M.;
Sun, F.;
Sun, S.;
Binder, B. J.;
Edmonds, J.;
Ye, W.;
Orcutt, B.;
Howard, E. C.;
Meile, C.
Alle
Alle
Einrichtung
Erscheinungsjahr
2007
Zeitschriftentitel
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
Band
73
Ausgabe
14
Seite(n)
4559-4569
ISSN
0099-2240
Page URI
https://pub.uni-bielefeld.de/record/1593149
Zitieren
Moran MA, Belas R, Schell MA, et al. Ecological genomics of marine roseobacters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 2007;73(14):4559-4569.
Moran, M. A., Belas, R., Schell, M. A., Gonzalez, J. M., Sun, F., Sun, S., Binder, B. J., et al. (2007). Ecological genomics of marine roseobacters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(14), 4559-4569. https://doi.org/10.1128/AEM.02580-06
Moran, M. A., Belas, R., Schell, M. A., Gonzalez, J. M., Sun, F., Sun, S., Binder, B. J., et al. 2007. “Ecological genomics of marine roseobacters”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73 (14): 4559-4569.
Moran, M. A., Belas, R., Schell, M. A., Gonzalez, J. M., Sun, F., Sun, S., Binder, B. J., Edmonds, J., Ye, W., Orcutt, B., et al. (2007). Ecological genomics of marine roseobacters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73, 4559-4569.
Moran, M.A., et al., 2007. Ecological genomics of marine roseobacters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 73(14), p 4559-4569.
M.A. Moran, et al., “Ecological genomics of marine roseobacters”, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, vol. 73, 2007, pp. 4559-4569.
Moran, M.A., Belas, R., Schell, M.A., Gonzalez, J.M., Sun, F., Sun, S., Binder, B.J., Edmonds, J., Ye, W., Orcutt, B., Howard, E.C., Meile, C., Palefsky, W., Goesmann, A., Ren, Q., Paulsen, I., Ulrich, L.E., Thompson, L.S., Saunders, E., Buchan, A.: Ecological genomics of marine roseobacters. APPLIED AND ENVIRONMENTAL MICROBIOLOGY. 73, 4559-4569 (2007).
Moran, M. A., Belas, R., Schell, M. A., Gonzalez, J. M., Sun, F., Sun, S., Binder, B. J., Edmonds, J., Ye, W., Orcutt, B., Howard, E. C., Meile, C., Palefsky, W., Goesmann, Alexander, Ren, Q., Paulsen, I., Ulrich, L. E., Thompson, L. S., Saunders, E., and Buchan, A. “Ecological genomics of marine roseobacters”. APPLIED AND ENVIRONMENTAL MICROBIOLOGY 73.14 (2007): 4559-4569.
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Bao W, Pan H, Zhang Z, Cheng Y, Xie Z, Zhang J, Li Y., Appl Microbiol Biotechnol 98(4), 2014
PMID: 23764769
Bao W, Pan H, Zhang Z, Cheng Y, Xie Z, Zhang J, Li Y., Appl Microbiol Biotechnol 98(4), 2014
PMID: 23764769
Biofilm formation and antibiotic production in Ruegeria mobilis are influenced by intracellular concentrations of cyclic dimeric guanosinmonophosphate.
D'Alvise PW, Magdenoska O, Melchiorsen J, Nielsen KF, Gram L., Environ Microbiol 16(5), 2014
PMID: 24118907
D'Alvise PW, Magdenoska O, Melchiorsen J, Nielsen KF, Gram L., Environ Microbiol 16(5), 2014
PMID: 24118907
Bacterial pathogens, virulence mechanism and host defence in marine macroalgae.
Egan S, Fernandes ND, Kumar V, Gardiner M, Thomas T., Environ Microbiol 16(4), 2014
PMID: 24112830
Egan S, Fernandes ND, Kumar V, Gardiner M, Thomas T., Environ Microbiol 16(4), 2014
PMID: 24112830
Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12.
Ji J, Zhang R, Jiao N., Stand Genomic Sci 9(), 2014
PMID: 25685262
Ji J, Zhang R, Jiao N., Stand Genomic Sci 9(), 2014
PMID: 25685262
Diversity of bacterioplankton in coastal seawaters of Fildes Peninsula, King George Island, Antarctica.
Zeng YX, Yu Y, Qiao ZY, Jin HY, Li HR., Arch Microbiol 196(2), 2014
PMID: 24408126
Zeng YX, Yu Y, Qiao ZY, Jin HY, Li HR., Arch Microbiol 196(2), 2014
PMID: 24408126
Evolutionary analysis of a streamlined lineage of surface ocean Roseobacters.
Luo H, Swan BK, Stepanauskas R, Hughes AL, Moran MA., ISME J 8(7), 2014
PMID: 24451207
Luo H, Swan BK, Stepanauskas R, Hughes AL, Moran MA., ISME J 8(7), 2014
PMID: 24451207
Abundance of broad bacterial taxa in the sargasso sea explained by environmental conditions but not water mass.
Sjöstedt J, Martiny JB, Munk P, Riemann L., Appl Environ Microbiol 80(9), 2014
PMID: 24561593
Sjöstedt J, Martiny JB, Munk P, Riemann L., Appl Environ Microbiol 80(9), 2014
PMID: 24561593
Assessing the exoproteome of marine bacteria, lesson from a RTX-toxin abundantly secreted by Phaeobacter strain DSM 17395.
Durighello E, Christie-Oleza JA, Armengaud J., PLoS One 9(2), 2014
PMID: 24586966
Durighello E, Christie-Oleza JA, Armengaud J., PLoS One 9(2), 2014
PMID: 24586966
Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome.
Durham BP, Grote J, Whittaker KA, Bender SJ, Luo H, Grim SL, Brown JM, Casey JR, Dron A, Florez-Leiva L, Krupke A, Luria CM, Mine AH, Nigro OD, Pather S, Talarmin A, Wear EK, Weber TS, Wilson JM, Church MJ, DeLong EF, Karl DM, Steward GF, Eppley JM, Kyrpides NC, Schuster S, Rappé MS., Stand Genomic Sci 9(3), 2014
PMID: 25197450
Durham BP, Grote J, Whittaker KA, Bender SJ, Luo H, Grim SL, Brown JM, Casey JR, Dron A, Florez-Leiva L, Krupke A, Luria CM, Mine AH, Nigro OD, Pather S, Talarmin A, Wear EK, Weber TS, Wilson JM, Church MJ, DeLong EF, Karl DM, Steward GF, Eppley JM, Kyrpides NC, Schuster S, Rappé MS., Stand Genomic Sci 9(3), 2014
PMID: 25197450
Genome sequence of the exopolysaccharide-producing Salipiger mucosus type strain (DSM 16094(T)), a moderately halophilic member of the Roseobacter clade.
Riedel T, Spring S, Fiebig A, Petersen J, Kyrpides NC, Göker M, Klenk HP., Stand Genomic Sci 9(3), 2014
PMID: 25197501
Riedel T, Spring S, Fiebig A, Petersen J, Kyrpides NC, Göker M, Klenk HP., Stand Genomic Sci 9(3), 2014
PMID: 25197501
Marine microbial metagenomics: from individual to the environment.
Tseng CH, Tang SL., Int J Mol Sci 15(5), 2014
PMID: 24857918
Tseng CH, Tang SL., Int J Mol Sci 15(5), 2014
PMID: 24857918
Comparative genomics of the protocatechuate branch of the β-ketoadipate pathway in the Roseobacter lineage.
Alejandro-Marín CM, Bosch R, Nogales B., Mar Genomics 17(), 2014
PMID: 24906178
Alejandro-Marín CM, Bosch R, Nogales B., Mar Genomics 17(), 2014
PMID: 24906178
Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.
Breider S, Scheuner C, Schumann P, Fiebig A, Petersen J, Pradella S, Klenk HP, Brinkhoff T, Göker M., Front Microbiol 5(), 2014
PMID: 25157246
Breider S, Scheuner C, Schumann P, Fiebig A, Petersen J, Pradella S, Klenk HP, Brinkhoff T, Göker M., Front Microbiol 5(), 2014
PMID: 25157246
Master recyclers: features and functions of bacteria associated with phytoplankton blooms.
Buchan A, LeCleir GR, Gulvik CA, González JM., Nat Rev Microbiol 12(10), 2014
PMID: 25134618
Buchan A, LeCleir GR, Gulvik CA, González JM., Nat Rev Microbiol 12(10), 2014
PMID: 25134618
Dynamics of metabolic activities and gene expression in the Roseobacter clade bacterium Phaeobacter sp. strain MED193 during growth with thiosulfate.
Muthusamy S, Baltar F, González JM, Pinhassi J., Appl Environ Microbiol 80(22), 2014
PMID: 25172867
Muthusamy S, Baltar F, González JM, Pinhassi J., Appl Environ Microbiol 80(22), 2014
PMID: 25172867
Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing.
Klindworth A, Mann AJ, Huang S, Wichels A, Quast C, Waldmann J, Teeling H, Glöckner FO., Mar Genomics 18 Pt B(), 2014
PMID: 25211053
Klindworth A, Mann AJ, Huang S, Wichels A, Quast C, Waldmann J, Teeling H, Glöckner FO., Mar Genomics 18 Pt B(), 2014
PMID: 25211053
A nonpyrrolysine member of the widely distributed trimethylamine methyltransferase family is a glycine betaine methyltransferase.
Ticak T, Kountz DJ, Girosky KE, Krzycki JA, Ferguson DJ., Proc Natl Acad Sci U S A 111(43), 2014
PMID: 25313086
Ticak T, Kountz DJ, Girosky KE, Krzycki JA, Ferguson DJ., Proc Natl Acad Sci U S A 111(43), 2014
PMID: 25313086
Evolutionary ecology of the marine Roseobacter clade.
Luo H, Moran MA., Microbiol Mol Biol Rev 78(4), 2014
PMID: 25428935
Luo H, Moran MA., Microbiol Mol Biol Rev 78(4), 2014
PMID: 25428935
Shotgun nanoLC-MS/MS proteogenomics to document MALDI-TOF biomarkers for screening new members of the Ruegeria genus.
Christie-Oleza JA, Piña-Villalonga JM, Guerin P, Miotello G, Bosch R, Nogales B, Armengaud J., Environ Microbiol 15(1), 2013
PMID: 22712501
Christie-Oleza JA, Piña-Villalonga JM, Guerin P, Miotello G, Bosch R, Nogales B, Armengaud J., Environ Microbiol 15(1), 2013
PMID: 22712501
Epibacterium ulvae gen. nov., sp. nov., epibiotic bacteria isolated from the surface of a marine alga.
Penesyan A, Breider S, Schumann P, Tindall BJ, Egan S, Brinkhoff T., Int J Syst Evol Microbiol 63(pt 5), 2013
PMID: 22904216
Penesyan A, Breider S, Schumann P, Tindall BJ, Egan S, Brinkhoff T., Int J Syst Evol Microbiol 63(pt 5), 2013
PMID: 22904216
The role of planktonic Flavobacteria in processing algal organic matter in coastal East Antarctica revealed using metagenomics and metaproteomics.
Williams TJ, Wilkins D, Long E, Evans F, DeMaere MZ, Raftery MJ, Cavicchioli R., Environ Microbiol 15(5), 2013
PMID: 23126454
Williams TJ, Wilkins D, Long E, Evans F, DeMaere MZ, Raftery MJ, Cavicchioli R., Environ Microbiol 15(5), 2013
PMID: 23126454
A novel inducer of Roseobacter motility is also a disruptor of algal symbiosis.
Sule P, Belas R., J Bacteriol 195(4), 2013
PMID: 23161030
Sule P, Belas R., J Bacteriol 195(4), 2013
PMID: 23161030
Key microbial drivers in Antarctic aquatic environments.
Wilkins D, Yau S, Williams TJ, Allen MA, Brown MV, DeMaere MZ, Lauro FM, Cavicchioli R., FEMS Microbiol Rev 37(3), 2013
PMID: 23062173
Wilkins D, Yau S, Williams TJ, Allen MA, Brown MV, DeMaere MZ, Lauro FM, Cavicchioli R., FEMS Microbiol Rev 37(3), 2013
PMID: 23062173
Biogeographic partitioning of Southern Ocean microorganisms revealed by metagenomics.
Wilkins D, Lauro FM, Williams TJ, Demaere MZ, Brown MV, Hoffman JM, Andrews-Pfannkoch C, McQuaid JB, Riddle MJ, Rintoul SR, Cavicchioli R., Environ Microbiol 15(5), 2013
PMID: 23199136
Wilkins D, Lauro FM, Williams TJ, Demaere MZ, Brown MV, Hoffman JM, Andrews-Pfannkoch C, McQuaid JB, Riddle MJ, Rintoul SR, Cavicchioli R., Environ Microbiol 15(5), 2013
PMID: 23199136
Extrachromosomal, extraordinary and essential--the plasmids of the Roseobacter clade.
Petersen J, Frank O, Göker M, Pradella S., Appl Microbiol Biotechnol 97(7), 2013
PMID: 23435940
Petersen J, Frank O, Göker M, Pradella S., Appl Microbiol Biotechnol 97(7), 2013
PMID: 23435940
Water mass and depth determine the distribution and diversity of Rhodobacterales in an Arctic marine system.
Fu Y, Keats KF, Rivkin RB, Lang AS., FEMS Microbiol Ecol 84(3), 2013
PMID: 23374017
Fu Y, Keats KF, Rivkin RB, Lang AS., FEMS Microbiol Ecol 84(3), 2013
PMID: 23374017
Patch-clamp characterization of the MscS-like mechanosensitive channel from Silicibacter pomeroyi.
Petrov E, Palanivelu D, Constantine M, Rohde PR, Cox CD, Nomura T, Minor DL, Martinac B., Biophys J 104(7), 2013
PMID: 23561519
Petrov E, Palanivelu D, Constantine M, Rohde PR, Cox CD, Nomura T, Minor DL, Martinac B., Biophys J 104(7), 2013
PMID: 23561519
The biodiscovery potential of marine bacteria: an investigation of phylogeny and function.
Mühling M, Joint I, Willetts AJ., Microb Biotechnol 6(4), 2013
PMID: 23557256
Mühling M, Joint I, Willetts AJ., Microb Biotechnol 6(4), 2013
PMID: 23557256
Simultaneous catabolism of plant-derived aromatic compounds results in enhanced growth for members of the Roseobacter lineage.
Gulvik CA, Buchan A., Appl Environ Microbiol 79(12), 2013
PMID: 23563956
Gulvik CA, Buchan A., Appl Environ Microbiol 79(12), 2013
PMID: 23563956
Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake.
Yau S, Lauro FM, Williams TJ, Demaere MZ, Brown MV, Rich J, Gibson JA, Cavicchioli R., ISME J 7(10), 2013
PMID: 23619305
Yau S, Lauro FM, Williams TJ, Demaere MZ, Brown MV, Rich J, Gibson JA, Cavicchioli R., ISME J 7(10), 2013
PMID: 23619305
Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean.
Boeuf D, Cottrell MT, Kirchman DL, Lebaron P, Jeanthon C., FEMS Microbiol Ecol 85(3), 2013
PMID: 23560623
Boeuf D, Cottrell MT, Kirchman DL, Lebaron P, Jeanthon C., FEMS Microbiol Ecol 85(3), 2013
PMID: 23560623
Functional and compositional succession of bacterioplankton in response to a gradient in bioavailable dissolved organic carbon.
Dinasquet J, Kragh T, Schrøter ML, Søndergaard M, Riemann L., Environ Microbiol 15(9), 2013
PMID: 23827019
Dinasquet J, Kragh T, Schrøter ML, Søndergaard M, Riemann L., Environ Microbiol 15(9), 2013
PMID: 23827019
Molecular characterization of the enzymes involved in the degradation of a brominated aromatic herbicide.
Chen K, Huang L, Xu C, Liu X, He J, Zinder SH, Li S, Jiang J., Mol Microbiol 89(6), 2013
PMID: 23859214
Chen K, Huang L, Xu C, Liu X, He J, Zinder SH, Li S, Jiang J., Mol Microbiol 89(6), 2013
PMID: 23859214
Swimming in light: a large-scale computational analysis of the metabolism of Dinoroseobacter shibae.
Rex R, Bill N, Schmidt-Hohagen K, Schomburg D., PLoS Comput Biol 9(10), 2013
PMID: 24098096
Rex R, Bill N, Schmidt-Hohagen K, Schomburg D., PLoS Comput Biol 9(10), 2013
PMID: 24098096
Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis.
Dogs M, Teshima H, Petersen J, Fiebig A, Chertkov O, Dalingault H, Chen A, Pati A, Goodwin LA, Chain P, Detter JC, Ivanova N, Lapidus A, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Göker M, Klenk HP, Brinkhoff T., Stand Genomic Sci 9(1), 2013
PMID: 24501652
Dogs M, Teshima H, Petersen J, Fiebig A, Chertkov O, Dalingault H, Chen A, Pati A, Goodwin LA, Chain P, Detter JC, Ivanova N, Lapidus A, Rohde M, Gronow S, Kyrpides NC, Woyke T, Simon M, Göker M, Klenk HP, Brinkhoff T., Stand Genomic Sci 9(1), 2013
PMID: 24501652
Contrasting responses of marine bacterial strains exposed to carboxylated single-walled carbon nanotubes.
Berdjeb L, Pelletier E, Pellerin J, Gagné JP, Lemarchand K., Aquat Toxicol 144-145(), 2013
PMID: 24184842
Berdjeb L, Pelletier E, Pellerin J, Gagné JP, Lemarchand K., Aquat Toxicol 144-145(), 2013
PMID: 24184842
Metatranscriptomic and functional metagenomic analysis of methylphosphonate utilization by marine bacteria.
Martínez A, Ventouras LA, Wilson ST, Karl DM, Delong EF., Front Microbiol 4(), 2013
PMID: 24324460
Martínez A, Ventouras LA, Wilson ST, Karl DM, Delong EF., Front Microbiol 4(), 2013
PMID: 24324460
Proteomic insights into the lifestyle of an environmentally relevant marine bacterium.
Christie-Oleza JA, Fernandez B, Nogales B, Bosch R, Armengaud J., ISME J 6(1), 2012
PMID: 21776030
Christie-Oleza JA, Fernandez B, Nogales B, Bosch R, Armengaud J., ISME J 6(1), 2012
PMID: 21776030
Genome content of uncultivated marine Roseobacters in the surface ocean.
Luo H, Löytynoja A, Moran MA., Environ Microbiol 14(1), 2012
PMID: 21854517
Luo H, Löytynoja A, Moran MA., Environ Microbiol 14(1), 2012
PMID: 21854517
Bacterial community transcription patterns during a marine phytoplankton bloom.
Rinta-Kanto JM, Sun S, Sharma S, Kiene RP, Moran MA., Environ Microbiol 14(1), 2012
PMID: 21985473
Rinta-Kanto JM, Sun S, Sharma S, Kiene RP, Moran MA., Environ Microbiol 14(1), 2012
PMID: 21985473
Functional diversity in the denitrifying biofilm of the methanol-fed marine denitrification system at the Montreal Biodome.
Auclair J, Parent S, Villemur R., Microb Ecol 63(4), 2012
PMID: 22006549
Auclair J, Parent S, Villemur R., Microb Ecol 63(4), 2012
PMID: 22006549
Assimilatory nitrate utilization by bacteria on the West Florida Shelf as determined by stable isotope probing and functional microarray analysis.
Wawrik B, Boling WB, Van Nostrand JD, Xie J, Zhou J, Bronk DA., FEMS Microbiol Ecol 79(2), 2012
PMID: 22092701
Wawrik B, Boling WB, Van Nostrand JD, Xie J, Zhou J, Bronk DA., FEMS Microbiol Ecol 79(2), 2012
PMID: 22092701
Comparative proteogenomics of twelve Roseobacter exoproteomes reveals different adaptive strategies among these marine bacteria.
Christie-Oleza JA, Piña-Villalonga JM, Bosch R, Nogales B, Armengaud J., Mol Cell Proteomics 11(2), 2012
PMID: 22122883
Christie-Oleza JA, Piña-Villalonga JM, Bosch R, Nogales B, Armengaud J., Mol Cell Proteomics 11(2), 2012
PMID: 22122883
The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment.
Villarreal-Chiu JF, Quinn JP, McGrath JW., Front Microbiol 3(), 2012
PMID: 22303297
Villarreal-Chiu JF, Quinn JP, McGrath JW., Front Microbiol 3(), 2012
PMID: 22303297
Comparative genomics reveals evidence of marine adaptation in Salinispora species.
Penn K, Jensen PR., BMC Genomics 13(), 2012
PMID: 22401625
Penn K, Jensen PR., BMC Genomics 13(), 2012
PMID: 22401625
Genetic analysis of the upper phenylacetate catabolic pathway in the production of tropodithietic acid by Phaeobacter gallaeciensis.
Berger M, Brock NL, Liesegang H, Dogs M, Preuth I, Simon M, Dickschat JS, Brinkhoff T., Appl Environ Microbiol 78(10), 2012
PMID: 22407685
Berger M, Brock NL, Liesegang H, Dogs M, Preuth I, Simon M, Dickschat JS, Brinkhoff T., Appl Environ Microbiol 78(10), 2012
PMID: 22407685
A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters.
Williams TJ, Long E, Evans F, Demaere MZ, Lauro FM, Raftery MJ, Ducklow H, Grzymski JJ, Murray AE, Cavicchioli R., ISME J 6(10), 2012
PMID: 22534610
Williams TJ, Long E, Evans F, Demaere MZ, Lauro FM, Raftery MJ, Ducklow H, Grzymski JJ, Murray AE, Cavicchioli R., ISME J 6(10), 2012
PMID: 22534610
A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters.
Grzymski JJ, Riesenfeld CS, Williams TJ, Dussaq AM, Ducklow H, Erickson M, Cavicchioli R, Murray AE., ISME J 6(10), 2012
PMID: 22534611
Grzymski JJ, Riesenfeld CS, Williams TJ, Dussaq AM, Ducklow H, Erickson M, Cavicchioli R, Murray AE., ISME J 6(10), 2012
PMID: 22534611
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.
Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann R., Science 336(6081), 2012
PMID: 22556258
Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann R., Science 336(6081), 2012
PMID: 22556258
Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life.
Thole S, Kalhoefer D, Voget S, Berger M, Engelhardt T, Liesegang H, Wollherr A, Kjelleberg S, Daniel R, Simon M, Thomas T, Brinkhoff T., ISME J 6(12), 2012
PMID: 22717884
Thole S, Kalhoefer D, Voget S, Berger M, Engelhardt T, Liesegang H, Wollherr A, Kjelleberg S, Daniel R, Simon M, Thomas T, Brinkhoff T., ISME J 6(12), 2012
PMID: 22717884
Think pink: photosynthesis, plasmids and the Roseobacter clade.
Petersen J, Brinkmann H, Bunk B, Michael V, Päuker O, Pradella S., Environ Microbiol 14(10), 2012
PMID: 22732061
Petersen J, Brinkmann H, Bunk B, Michael V, Päuker O, Pradella S., Environ Microbiol 14(10), 2012
PMID: 22732061
Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes.
Lenk S, Moraru C, Hahnke S, Arnds J, Richter M, Kube M, Reinhardt R, Brinkhoff T, Harder J, Amann R, Mußmann M., ISME J 6(12), 2012
PMID: 22739490
Lenk S, Moraru C, Hahnke S, Arnds J, Richter M, Kube M, Reinhardt R, Brinkhoff T, Harder J, Amann R, Mußmann M., ISME J 6(12), 2012
PMID: 22739490
A complex LuxR-LuxI type quorum sensing network in a roseobacterial marine sponge symbiont activates flagellar motility and inhibits biofilm formation.
Zan J, Cicirelli EM, Mohamed NM, Sibhatu H, Kroll S, Choi O, Uhlson CL, Wysoczynski CL, Murphy RC, Churchill ME, Hill RT, Fuqua C., Mol Microbiol 85(5), 2012
PMID: 22742196
Zan J, Cicirelli EM, Mohamed NM, Sibhatu H, Kroll S, Choi O, Uhlson CL, Wysoczynski CL, Murphy RC, Churchill ME, Hill RT, Fuqua C., Mol Microbiol 85(5), 2012
PMID: 22742196
Specificity of associations between bacteria and the coral Pocillopora meandrina during early development.
Apprill A, Marlow HQ, Martindale MQ, Rappé MS., Appl Environ Microbiol 78(20), 2012
PMID: 22904048
Apprill A, Marlow HQ, Martindale MQ, Rappé MS., Appl Environ Microbiol 78(20), 2012
PMID: 22904048
Streamlining and core genome conservation among highly divergent members of the SAR11 clade.
Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS., MBio 3(5), 2012
PMID: 22991429
Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS., MBio 3(5), 2012
PMID: 22991429
Exoproteomics: exploring the world around biological systems.
Armengaud J, Christie-Oleza JA, Clair G, Malard V, Duport C., Expert Rev Proteomics 9(5), 2012
PMID: 23194272
Armengaud J, Christie-Oleza JA, Clair G, Malard V, Duport C., Expert Rev Proteomics 9(5), 2012
PMID: 23194272
Proteomic responses of Roseobacter litoralis OCh149 to starvation and light regimen.
Zong R, Jiao N., Microbes Environ 27(4), 2012
PMID: 23047149
Zong R, Jiao N., Microbes Environ 27(4), 2012
PMID: 23047149
Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray.
Rinta-Kanto JM, Bürgmann H, Gifford SM, Sun S, Sharma S, del Valle DA, Kiene RP, Moran MA., Environ Microbiol 13(2), 2011
PMID: 20880331
Rinta-Kanto JM, Bürgmann H, Gifford SM, Sun S, Sharma S, del Valle DA, Kiene RP, Moran MA., Environ Microbiol 13(2), 2011
PMID: 20880331
Temperature induced bacterial virulence and bleaching disease in a chemically defended marine macroalga.
Case RJ, Longford SR, Campbell AH, Low A, Tujula N, Steinberg PD, Kjelleberg S., Environ Microbiol 13(2), 2011
PMID: 20946533
Case RJ, Longford SR, Campbell AH, Low A, Tujula N, Steinberg PD, Kjelleberg S., Environ Microbiol 13(2), 2011
PMID: 20946533
Genome sequence of strain HTCC2083, a novel member of the marine clade Roseobacter.
Kang I, Vergin KL, Oh HM, Choi A, Giovannoni SJ, Cho JC., J Bacteriol 193(1), 2011
PMID: 21036993
Kang I, Vergin KL, Oh HM, Choi A, Giovannoni SJ, Cho JC., J Bacteriol 193(1), 2011
PMID: 21036993
Correlating carbon monoxide oxidation with cox genes in the abundant Marine Roseobacter Clade.
Cunliffe M., ISME J 5(4), 2011
PMID: 21068776
Cunliffe M., ISME J 5(4), 2011
PMID: 21068776
Origin and evolution of a novel DnaA-like plasmid replication type in Rhodobacterales.
Petersen J, Brinkmann H, Berger M, Brinkhoff T, Päuker O, Pradella S., Mol Biol Evol 28(3), 2011
PMID: 21097494
Petersen J, Brinkmann H, Berger M, Brinkhoff T, Päuker O, Pradella S., Mol Biol Evol 28(3), 2011
PMID: 21097494
Phylogeny and compatibility: plasmid classification in the genomics era.
Petersen J., Arch Microbiol 193(5), 2011
PMID: 21374058
Petersen J., Arch Microbiol 193(5), 2011
PMID: 21374058
Role of the phosphatase PhoX in the phosphorus metabolism of the marine bacterium Ruegeria pomeroyi DSS-3.
Sebastian M, Ammerman JW., Environ Microbiol Rep 3(5), 2011
PMID: 23761332
Sebastian M, Ammerman JW., Environ Microbiol Rep 3(5), 2011
PMID: 23761332
Increase in Alphaproteobacteria in association with a polychaete, Capitella sp. I, in the organically enriched sediment.
Kunihiro T, Takasu H, Miyazaki T, Uramoto Y, Kinoshita K, Yodnarasri S, Hama D, Wada M, Kogure K, Ohwada K, Tsutsumi H., ISME J 5(11), 2011
PMID: 21544104
Kunihiro T, Takasu H, Miyazaki T, Uramoto Y, Kinoshita K, Yodnarasri S, Hama D, Wada M, Kogure K, Ohwada K, Tsutsumi H., ISME J 5(11), 2011
PMID: 21544104
Genome sequence of strain TW15, a novel member of the genus Ruegeria, belonging to the marine Roseobacter clade.
Lee J, Roh SW, Whon TW, Shin NR, Kim YO, Bae JW., J Bacteriol 193(13), 2011
PMID: 21551304
Lee J, Roh SW, Whon TW, Shin NR, Kim YO, Bae JW., J Bacteriol 193(13), 2011
PMID: 21551304
Large-scale comparative phenotypic and genomic analyses reveal ecological preferences of shewanella species and identify metabolic pathways conserved at the genus level.
Rodrigues JL, Serres MH, Tiedje JM., Appl Environ Microbiol 77(15), 2011
PMID: 21642407
Rodrigues JL, Serres MH, Tiedje JM., Appl Environ Microbiol 77(15), 2011
PMID: 21642407
Planktonic microbes in the Gulf of Maine area.
Li WK, Andersen RA, Gifford DJ, Incze LS, Martin JL, Pilskaln CH, Rooney-Varga JN, Sieracki ME, Wilson WH, Wolff NH., PLoS One 6(6), 2011
PMID: 21698243
Li WK, Andersen RA, Gifford DJ, Incze LS, Martin JL, Pilskaln CH, Rooney-Varga JN, Sieracki ME, Wilson WH, Wolff NH., PLoS One 6(6), 2011
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Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis.
Kalhoefer D, Thole S, Voget S, Lehmann R, Liesegang H, Wollher A, Daniel R, Simon M, Brinkhoff T., BMC Genomics 12(), 2011
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Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications.
Tang KH, Tang YJ, Blankenship RE., Front Microbiol 2(), 2011
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The microbial carbon pump: from genes to ecosystems.
Jiao N, Zheng Q., Appl Environ Microbiol 77(21), 2011
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Jiao N, Zheng Q., Appl Environ Microbiol 77(21), 2011
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Stable isotope probing of an algal bloom to identify uncultivated members of the Rhodobacteraceae associated with low-molecular-weight polycyclic aromatic hydrocarbon degradation.
Gutierrez T, Singleton DR, Aitken MD, Semple KT., Appl Environ Microbiol 77(21), 2011
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Gutierrez T, Singleton DR, Aitken MD, Semple KT., Appl Environ Microbiol 77(21), 2011
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Tropodithietic acid production in Phaeobacter gallaeciensis is regulated by N-acyl homoserine lactone-mediated quorum sensing.
Berger M, Neumann A, Schulz S, Simon M, Brinkhoff T., J Bacteriol 193(23), 2011
PMID: 21949069
Berger M, Neumann A, Schulz S, Simon M, Brinkhoff T., J Bacteriol 193(23), 2011
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Isolation and characterization of a psychropiezophilic alphaproteobacterium.
Eloe EA, Malfatti F, Gutierrez J, Hardy K, Schmidt WE, Pogliano K, Pogliano J, Azam F, Bartlett DH., Appl Environ Microbiol 77(22), 2011
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Eloe EA, Malfatti F, Gutierrez J, Hardy K, Schmidt WE, Pogliano K, Pogliano J, Azam F, Bartlett DH., Appl Environ Microbiol 77(22), 2011
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The phytoplankton Nannochloropsis oculata enhances the ability of Roseobacter clade bacteria to inhibit the growth of fish pathogen Vibrio anguillarum.
Sharifah EN, Eguchi M., PLoS One 6(10), 2011
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Sharifah EN, Eguchi M., PLoS One 6(10), 2011
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Genomes and virulence factors of novel bacterial pathogens causing bleaching disease in the marine red alga Delisea pulchra.
Fernandes N, Case RJ, Longford SR, Seyedsayamdost MR, Steinberg PD, Kjelleberg S, Thomas T., PLoS One 6(12), 2011
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Fernandes N, Case RJ, Longford SR, Seyedsayamdost MR, Steinberg PD, Kjelleberg S, Thomas T., PLoS One 6(12), 2011
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The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea.
Wagner-Döbler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, Bunk B, Cypionka H, Daniel R, Drepper T, Gerdts G, Hahnke S, Han C, Jahn D, Kalhoefer D, Kiss H, Klenk HP, Kyrpides N, Liebl W, Liesegang H, Meincke L, Pati A, Petersen J, Piekarski T, Pommerenke C, Pradella S, Pukall R, Rabus R, Stackebrandt E, Thole S, Thompson L, Tielen P, Tomasch J, von Jan M, Wanphrut N, Wichels A, Zech H, Simon M., ISME J 4(1), 2010
PMID: 19741735
Wagner-Döbler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, Bunk B, Cypionka H, Daniel R, Drepper T, Gerdts G, Hahnke S, Han C, Jahn D, Kalhoefer D, Kiss H, Klenk HP, Kyrpides N, Liebl W, Liesegang H, Meincke L, Pati A, Petersen J, Piekarski T, Pommerenke C, Pradella S, Pukall R, Rabus R, Stackebrandt E, Thole S, Thompson L, Tielen P, Tomasch J, von Jan M, Wanphrut N, Wichels A, Zech H, Simon M., ISME J 4(1), 2010
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The MiST2 database: a comprehensive genomics resource on microbial signal transduction.
Ulrich LE, Zhulin IB., Nucleic Acids Res 38(database issue), 2010
PMID: 19900966
Ulrich LE, Zhulin IB., Nucleic Acids Res 38(database issue), 2010
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Genome organisation of the marine Roseobacter clade member Marinovum algicola.
Pradella S, Päuker O, Petersen J., Arch Microbiol 192(2), 2010
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Pradella S, Päuker O, Petersen J., Arch Microbiol 192(2), 2010
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Do the organic sulfur compounds DMSP and DMS drive coral microbial associations?
Raina JB, Dinsdale EA, Willis BL, Bourne DG., Trends Microbiol 18(3), 2010
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Raina JB, Dinsdale EA, Willis BL, Bourne DG., Trends Microbiol 18(3), 2010
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Genome characteristics of a generalist marine bacterial lineage.
Newton RJ, Griffin LE, Bowles KM, Meile C, Gifford S, Givens CE, Howard EC, King E, Oakley CA, Reisch CR, Rinta-Kanto JM, Sharma S, Sun S, Varaljay V, Vila-Costa M, Westrich JR, Moran MA., ISME J 4(6), 2010
PMID: 20072162
Newton RJ, Griffin LE, Bowles KM, Meile C, Gifford S, Givens CE, Howard EC, King E, Oakley CA, Reisch CR, Rinta-Kanto JM, Sharma S, Sun S, Varaljay V, Vila-Costa M, Westrich JR, Moran MA., ISME J 4(6), 2010
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Molecular mechanisms underlying roseobacter-phytoplankton symbioses.
Geng H, Belas R., Curr Opin Biotechnol 21(3), 2010
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Geng H, Belas R., Curr Opin Biotechnol 21(3), 2010
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Expression of tropodithietic acid biosynthesis is controlled by a novel autoinducer.
Geng H, Belas R., J Bacteriol 192(17), 2010
PMID: 20601479
Geng H, Belas R., J Bacteriol 192(17), 2010
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Phylogenomic analysis of marine Roseobacters.
Tang K, Huang H, Jiao N, Wu CH., PLoS One 5(7), 2010
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In-depth analysis of exoproteomes from marine bacteria by shotgun liquid chromatography-tandem mass spectrometry: the Ruegeria pomeroyi DSS-3 case-study.
Christie-Oleza JA, Armengaud J., Mar Drugs 8(8), 2010
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Genome sequence of the marine alphaproteobacterium HTCC2150, assigned to the Roseobacter clade.
Kang I, Oh HM, Vergin KL, Giovannoni SJ, Cho JC., J Bacteriol 192(23), 2010
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Kang I, Oh HM, Vergin KL, Giovannoni SJ, Cho JC., J Bacteriol 192(23), 2010
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High abundance of virulence gene homologues in marine bacteria.
Persson OP, Pinhassi J, Riemann L, Marklund BI, Rhen M, Normark S, González JM, Hagström A., Environ Microbiol 11(6), 2009
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Persson OP, Pinhassi J, Riemann L, Marklund BI, Rhen M, Normark S, González JM, Hagström A., Environ Microbiol 11(6), 2009
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Prokaryotic genomes and diversity in surface ocean waters: interrogating the global ocean sampling metagenome.
Biers EJ, Sun S, Howard EC., Appl Environ Microbiol 75(7), 2009
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Biers EJ, Sun S, Howard EC., Appl Environ Microbiol 75(7), 2009
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The alkaline phosphatase PhoX is more widely distributed in marine bacteria than the classical PhoA.
Sebastian M, Ammerman JW., ISME J 3(5), 2009
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The onset of microbial associations in the coral Pocillopora meandrina.
Apprill A, Marlow HQ, Martindale MQ, Rappé MS., ISME J 3(6), 2009
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Impact of sideways and bottom-up control factors on bacterial community succession over a tidal cycle.
Chauhan A, Cherrier J, Williams HN., Proc Natl Acad Sci U S A 106(11), 2009
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Chauhan A, Cherrier J, Williams HN., Proc Natl Acad Sci U S A 106(11), 2009
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Genetic determinants of Silicibacter sp. TM1040 motility.
Belas R, Horikawa E, Aizawa S, Suvanasuthi R., J Bacteriol 191(14), 2009
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Belas R, Horikawa E, Aizawa S, Suvanasuthi R., J Bacteriol 191(14), 2009
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Growth phase-dependent global protein and metabolite profiles of Phaeobacter gallaeciensis strain DSM 17395, a member of the marine Roseobacter-clade.
Zech H, Thole S, Schreiber K, Kalhöfer D, Voget S, Brinkhoff T, Simon M, Schomburg D, Rabus R., Proteomics 9(14), 2009
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Petersen J, Brinkmann H, Pradella S., Environ Microbiol 11(10), 2009
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Petersen J, Brinkmann H, Pradella S., Environ Microbiol 11(10), 2009
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Genome sequences of two novel phages infecting marine roseobacters.
Zhao Y, Wang K, Jiao N, Chen F., Environ Microbiol 11(8), 2009
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Zhao Y, Wang K, Jiao N, Chen F., Environ Microbiol 11(8), 2009
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Surface colonization by marine roseobacters: integrating genotype and phenotype.
Slightom RN, Buchan A., Appl Environ Microbiol 75(19), 2009
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Carbohydrate metabolism and carbon fixation in Roseobacter denitrificans OCh114.
Tang KH, Feng X, Tang YJ, Blankenship RE., PLoS One 4(10), 2009
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Development and application of quantitative-PCR tools for subgroups of the Roseobacter clade.
Buchan A, Hadden M, Suzuki MT., Appl Environ Microbiol 75(23), 2009
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Buchan A, Hadden M, Suzuki MT., Appl Environ Microbiol 75(23), 2009
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Genetic tools for the investigation of Roseobacter clade bacteria.
Piekarski T, Buchholz I, Drepper T, Schobert M, Wagner-Doebler I, Tielen P, Jahn D., BMC Microbiol 9(), 2009
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Piekarski T, Buchholz I, Drepper T, Schobert M, Wagner-Doebler I, Tielen P, Jahn D., BMC Microbiol 9(), 2009
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Genetic dissection of tropodithietic acid biosynthesis by marine roseobacters.
Geng H, Bruhn JB, Nielsen KF, Gram L, Belas R., Appl Environ Microbiol 74(5), 2008
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Geng H, Bruhn JB, Nielsen KF, Gram L, Belas R., Appl Environ Microbiol 74(5), 2008
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Diversity, ecology, and genomics of the Roseobacter clade: a short overview.
Brinkhoff T, Giebel HA, Simon M., Arch Microbiol 189(6), 2008
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Occurrence and expression of gene transfer agent genes in marine bacterioplankton.
Biers EJ, Wang K, Pennington C, Belas R, Chen F, Moran MA., Appl Environ Microbiol 74(10), 2008
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JCoast - a biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes.
Richter M, Lombardot T, Kostadinov I, Kottmann R, Duhaime MB, Peplies J, Glöckner FO., BMC Bioinformatics 9(), 2008
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Richter M, Lombardot T, Kostadinov I, Kottmann R, Duhaime MB, Peplies J, Glöckner FO., BMC Bioinformatics 9(), 2008
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Proteorhodopsins: an array of physiological roles?
Fuhrman JA, Schwalbach MS, Stingl U., Nat Rev Microbiol 6(6), 2008
PMID: 18475306
Fuhrman JA, Schwalbach MS, Stingl U., Nat Rev Microbiol 6(6), 2008
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Diversity and abundance of nitrate assimilation genes in the northern South china sea.
Cai H, Jiao N., Microb Ecol 56(4), 2008
PMID: 18481138
Cai H, Jiao N., Microb Ecol 56(4), 2008
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Heme uptake by Microscilla marina and evidence for heme uptake systems in the genomes of diverse marine bacteria.
Hopkinson BM, Roe KL, Barbeau KA., Appl Environ Microbiol 74(20), 2008
PMID: 18757577
Hopkinson BM, Roe KL, Barbeau KA., Appl Environ Microbiol 74(20), 2008
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Analysis of the Pseudoalteromonas tunicata genome reveals properties of a surface-associated life style in the marine environment.
Thomas T, Evans FF, Schleheck D, Mai-Prochnow A, Burke C, Penesyan A, Dalisay DS, Stelzer-Braid S, Saunders N, Johnson J, Ferriera S, Kjelleberg S, Egan S., PLoS One 3(9), 2008
PMID: 18813346
Thomas T, Evans FF, Schleheck D, Mai-Prochnow A, Burke C, Penesyan A, Dalisay DS, Stelzer-Braid S, Saunders N, Johnson J, Ferriera S, Kjelleberg S, Egan S., PLoS One 3(9), 2008
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MetaMine--a tool to detect and analyse gene patterns in their environmental context.
Bohnebeck U, Lombardot T, Kottmann R, Glöckner FO., BMC Bioinformatics 9(), 2008
PMID: 18957118
Bohnebeck U, Lombardot T, Kottmann R, Glöckner FO., BMC Bioinformatics 9(), 2008
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Resourceful heterotrophs make the most of light in the coastal ocean.
Moran MA, Miller WL., Nat Rev Microbiol 5(10), 2007
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Moran MA, Miller WL., Nat Rev Microbiol 5(10), 2007
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Microbial structuring of marine ecosystems.
Azam F, Malfatti F., Nat Rev Microbiol 5(10), 2007
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Azam F, Malfatti F., Nat Rev Microbiol 5(10), 2007
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The importance of culturing bacterioplankton in the 'omics' age.
Giovannoni S, Stingl U., Nat Rev Microbiol 5(10), 2007
PMID: 17853909
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AUTHOR UNKNOWN, 2001
Dimethylsulfoniopropionate turnover is linked to the composition and dynamics of the bacterioplankton assemblage during a microcosm phytoplankton bloom.
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Pradella S, Allgaier M, Hoch C, Pauker O, Stackebrandt E, Wagner-Dobler I., Appl. Environ. Microbiol. 70(6), 2004
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Riemann L, Steward GF, Azam F., Appl. Environ. Microbiol. 66(2), 2000
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Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, Rajandream MA, Barrell B., Bioinformatics 16(10), 2000
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Santos SR, Ochman H., Environ. Microbiol. 6(7), 2004
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The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism.
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AUTHOR UNKNOWN, 2002
Comparative metagenomics of microbial communities.
Tringe SG, von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM., Science 308(5721), 2005
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One-component systems dominate signal transduction in prokaryotes.
Ulrich LE, Koonin EV, Zhulin IB., Trends Microbiol. 13(2), 2005
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Nucleotide sequence based characterizations of two cryptic plasmids from the marine bacterium Ruegeria isolate PR1b.
Zhong Z, Caspi R, Helinski D, Knauf V, Sykes S, O'Byrne C, Shea TP, Wilkinson JE, DeLoughery C, Toukdarian A., Plasmid 49(3), 2003
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