Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD
Buttner CR, Sorg I, Cornelis GR, Heinz DW, Niemann H (2008)
JOURNAL OF MOLECULAR BIOLOGY 375(4): 997-1012.
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Autor*in
Buttner, Carina R.;
Sorg, Isabel;
Cornelis, Guy R.;
Heinz, Dirk W.;
Niemann, HartmutUniBi
Einrichtung
Abstract / Bemerkung
Many Gram-negative bacteria use a type III secretion (T3S) system to directly inject effector molecules into eucaryotic cells in order to establish a symbiotic or pathogenic relationship with their host. The translocation of many T3S proteins requires specialized chaperones from the bacterial cytosol. SycD belongs to a class of T3S chaperones that assists the secretion of pore-forming translocators and, specifically chaperones the translocators YopB and YopD from enteropathogenic Yersinia enterocolitica. In addition, SycD is involved in the regulation of virulence factor biosynthesis and secretion. In this study,,we present two crystal structures of Y. enterocolitica SycD at 1.95 and 2.6 angstrom resolution, the first experimental structures of a T3S class 11 chaperone specific for translocators. The fold of SycD is entirely a-helical and reveals three tetratricopeptide repeat-like motifs that had been predicted from amino acid sequence. In both structures, SycD forms dimers utilizing residues from the first tetratricopeptide repeat motif. Using site-directed mutagenesis and size exclusion chromatography, we verified that SycD forms head-to-head homodimers in solution. Although in both structures, dimerization largely depends on the same residues, the two assemblies represent alternative dimers that exhibit different monomer orientations and overall shape. In these two distinct head-to-head dimers, both the concave and the convex surface of each monomer are accessible for interactions with the SycD binding partners YopB and YopD. A SycD variant carrying two point mutations in the dimerization interface is properly folded but defective in dimerization. Expression of this stable SycD monomer in Yersinia does not rescue the phenotype of a sycD null mutant, suggesting a physiological relevance of the dimerization interface. (c) 2007 Elsevier Ltd. All rights reserved.
Stichworte
alternative dimer assembly;
SycD;
tetratricopeptide repeat;
type III secretion;
chaperone
Erscheinungsjahr
2008
Zeitschriftentitel
JOURNAL OF MOLECULAR BIOLOGY
Band
375
Ausgabe
4
Seite(n)
997-1012
ISSN
0022-2836
Page URI
https://pub.uni-bielefeld.de/record/1592639
Zitieren
Buttner CR, Sorg I, Cornelis GR, Heinz DW, Niemann H. Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. JOURNAL OF MOLECULAR BIOLOGY. 2008;375(4):997-1012.
Buttner, C. R., Sorg, I., Cornelis, G. R., Heinz, D. W., & Niemann, H. (2008). Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. JOURNAL OF MOLECULAR BIOLOGY, 375(4), 997-1012. https://doi.org/10.1016/j.jmb.2007.11.009
Buttner, Carina R., Sorg, Isabel, Cornelis, Guy R., Heinz, Dirk W., and Niemann, Hartmut. 2008. “Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD”. JOURNAL OF MOLECULAR BIOLOGY 375 (4): 997-1012.
Buttner, C. R., Sorg, I., Cornelis, G. R., Heinz, D. W., and Niemann, H. (2008). Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. JOURNAL OF MOLECULAR BIOLOGY 375, 997-1012.
Buttner, C.R., et al., 2008. Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. JOURNAL OF MOLECULAR BIOLOGY, 375(4), p 997-1012.
C.R. Buttner, et al., “Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD”, JOURNAL OF MOLECULAR BIOLOGY, vol. 375, 2008, pp. 997-1012.
Buttner, C.R., Sorg, I., Cornelis, G.R., Heinz, D.W., Niemann, H.: Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD. JOURNAL OF MOLECULAR BIOLOGY. 375, 997-1012 (2008).
Buttner, Carina R., Sorg, Isabel, Cornelis, Guy R., Heinz, Dirk W., and Niemann, Hartmut. “Structure of the Yersinia enterocolitica type III secretion translocator chaperone SycD”. JOURNAL OF MOLECULAR BIOLOGY 375.4 (2008): 997-1012.
Daten bereitgestellt von European Bioinformatics Institute (EBI)
UNIPROT
1 Eintrag gefunden, die diesen Artikel zitieren
Low calcium response locus protein H (UNIPROT: O87496)
Organism: Yersinia enterocolitica
Download in FASTA format
Organism: Yersinia enterocolitica
Download in FASTA format
INTERPRO
5 Einträge gefunden, die diesen Artikel zitieren
T3SS_Ca_resp_chp_LcrH/SycD_sub (INTERPRO: IPR016379)
Protein family/domain name: Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup
Protein family/domain name: Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup
TPR-contain_dom (INTERPRO: IPR013026)
Protein family/domain name: Tetratricopeptide repeat-containing domain
Protein family/domain name: Tetratricopeptide repeat-containing domain
T3SS_Ca_resp_chp_LcrH/SycD (INTERPRO: IPR005415)
Protein family/domain name: Type III secretion system, low calcium response, chaperone LcrH/SycD
Protein family/domain name: Type III secretion system, low calcium response, chaperone LcrH/SycD
TPR-like_helical_dom (INTERPRO: IPR011990)
Protein family/domain name: Tetratricopeptide-like helical domain
Protein family/domain name: Tetratricopeptide-like helical domain
PDB
2 Einträge gefunden, die diesen Artikel zitieren
x-ray diffraction (PDB: 2vgy)
Protein structure name: crystal structure of the yersinia enterocolitica type iii secretion translocator chaperone sycd (alternative dimer)
Public wwPDB file in PDB format
Protein structure name: crystal structure of the yersinia enterocolitica type iii secretion translocator chaperone sycd (alternative dimer)
Public wwPDB file in PDB format
x-ray diffraction (PDB: 2vgx)
Protein structure name: structure of the yersinia enterocolitica type iii secretion translocator chaperone sycd
Public wwPDB file in PDB format
Protein structure name: structure of the yersinia enterocolitica type iii secretion translocator chaperone sycd
Public wwPDB file in PDB format
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Genetic analysis of the formation of the Ysc-Yop translocation pore in macrophages by Yersinia enterocolitica: role of LcrV, YscF and YopN.
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