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34 Publikationen

2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
Pucker, Boas, Schilbert, Hanna, and Schumacher, Sina Franziska. “Integrating Molecular Biology and Bioinformatics Education”. Journal of Integrative Bioinformatics (2019).
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2017 | Zeitschriftenaufsatz | PUB-ID: 2911058
Tauch, Andreas, and Al-Dilaimi, Arwa. “Bioinformatics in Germany: toward a national-level infrastructure”. Briefings in Bioinformatics (2017).
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914105
Schatschneider, Sarah, Schneider, Jessica, Blom, Jochen, Letisse, Fabien, Niehaus, Karsten, Goesmann, Alexander, and Vorhölter, Frank-Jörg. “Systems and synthetic biology perspective of the versatile plant-pathogenic and polysaccharide-producing bacterium Xanthomonas campestris”. MICROBIOLOGY-SGM 163.8 (2017): 1117-1144.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Langenkämper, Daniel, Jakobi, Tobias, Feld, Dustin, Jelonek, Lukas, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations”. Frontiers in Genetics 7 (2016): 5.
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2015 | Bielefelder E-Dissertation | PUB-ID: 2786037
Hilker, Rolf. Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains. Bielefeld: Bielefeld University, 2015.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2706029
Kessler, Nikolas, Walter, Frederik, Persicke, Marcus, Albaum, Stefan, Kalinowski, Jörn, Goesmann, Alexander, Niehaus, Karsten, and Nattkemper, Tim Wilhelm. “ALLocator: An Interactive Web Platform for the Analysis of Metabolomic LC-ESI-MS Datasets, Enabling Semi-Automated, User-Revised Compound Annotation and Mass Isotopomer Ratio Analysis”. PLoS ONE 9.11 (2014): e113909.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705712
Langenkämper, Daniel, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. “AKE - The Accelerated k-mer Exploration Web-Tool for Rapid Taxonomic Classification and Visualization”. BMC Bioinformatics 15 (2014): 384.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Jakobi, Tobias, Brinkrolf, Karina, Tauch, Andreas, Noll, Thomas, Stoye, Jens, Pühler, Alfred, and Goesmann, Alexander. “Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing”. Journal of Biotechnology 190 (2014): 64-75.
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2014 | Bielefelder E-Dissertation | PUB-ID: 2684948
Hippe, Klaus. Identifikation von potenziellen Transkriptionsfaktorbindestellen in Nukleotidsequenzen basierend auf einem Data-Warehouse-System. Bielefeld: Bielefeld University, 2014.
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2014 | Bielefelder E-Dissertation | PUB-ID: 2703966
Jakobi, Tobias. Bioinformatic methods for eukaryotic RNA-Seq-based promoter identification. Bielefeld: Bielefeld University, 2014.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2655342
Danisman, Selahattin, van Dijk, Aalt D.J., Bimbo, Andrea, van der Wal, Froukje, Hennig, Lars, de Folter, Stefan, Angenent, Gerco C., and Immink, Richard G.H. “Analysis of functional redundancies within the Arabidopsis TCP transcription factor family”. Journal of Experimental Botany 64.18 (2013): 5673-5685.
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2013 | Bielefelder E-Dissertation | PUB-ID: 2594322
Janowski, Sebastian Jan. VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications. Bielefeld: Bielefeld University, 2013.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610505
Purser, Autun, Ontrup, Jörg, Schoening, Timm, Thomsen, Laurenz, Tong, R, Unnithan, Vikram, and Nattkemper, Tim Wilhelm. “Microhabitat and shrimp abundance within a Norwegian cold-water coral ecosystem”. Biogeosciences 10.9 (2013): 5779-5791.
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2012 | Bielefelder E-Dissertation | PUB-ID: 2557380
Sommer, Björn. CELLmicrocosmos - Integrative cell modeling at the  molecular, mesoscopic and functional level. Bielefeld: Bielefeld University, 2012.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498232
Trötschel, C, Albaum, Stefan, Wolff, D, Schröder, S, Goesmann, Alexander, Nattkemper, Tim Wilhelm, and Poetsch, A. “Protein turnover quantification in a multi-labeling approach - from data calculation to evaluation”. Molecular & Cellular Proteomics 11.8 (2012): 512-526.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2409400
Töpel, Thoralf, Scheible, Dagmar, Trefz, Friedrich, and Hofestädt, Ralf. “RAMEDIS: a comprehensive information system for variations and corresponding phenotypes of rare metabolic diseases”. Human Mutation 31.1 (2010): E1081-E1088.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2305073
Oehm, Sebastian. Comparing organisms on the level of metabolism. Bielefeld (Germany): Bielefeld University, 2009.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052
Martin, Christian, Diaz, Naryttza N., Ontrup, Jörg, and Nattkemper, Tim Wilhelm. “Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification”. Bioinformatics 24.14 (2008): 1568-1574.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588303
Sczyrba, Alexander, Konermann, Susanne, and Giegerich, Robert. “Two interactive bioinformatics courses at the bielefeld university bioinformatics server”. BRIEFINGS IN BIOINFORMATICS 9.3 (2008): 243-249.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588308
Giegerich, Robert, Brazma, Alvis, Jonassen, Inge, Ukkonen, Esko, and Vingron, Martin. “The BREW workshop series: a stimulating experience in PhD education”. Briefings in Bioinformatics 9.3 (2008): 250-253.
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2007 | Bielefelder E-Dissertation | PUB-ID: 2305131
Carvalho Junior, Sérgio Anibal de. Algorithms for improving the design and production of oligonucleotide microarrays. Bielefeld (Germany): Bielefeld University, 2007.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1894739
Küster, Helge, Becker, Anke, Firnhaber, Christian, Hohnjec, Natalija, Manthey, Katja, Perlick, Andreas M., Bekel, Thomas, Dondrup, Michael, Henckel, Kolja, Goesmann, Alexander, Meyer, Folker, Wipf, Daniel, Requena, Natalia, Hildebrandt, Ulrich, Hampp, Rüdiger, Nehls, Uwe, Krajinski, Franziska, Franken, Philipp, and Pühler, Alfred. “Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses”. Phytochemistry 68.1 (2007): 19-32.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594797
Khan, Imtiaz A., Husemann, Peter, Campbell, Lee, White, Nick S., White, Richard J., Smith, Paul J., and Errington, Rachel J. “ProgeniDB - A novel cell lineage database for generation associated phenotypic behavior in cell-based assays”. CELL CYCLE 6.7 (2007): 868-874.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1902179
Gerlach, Wolfgang, and Giegerich, Robert. “GUUGle: a utility for fast exact matching under RNA complementary rules including G-U base pairing.”. Bioinformatics 22.6 (2006): 762-764.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599808
Chen, M, and Hofestädt, Ralf. “A medical bioinformatics approach for metabolic disorders: Biomedical data prediction, modeling, and systematic analysis”. JOURNAL OF BIOMEDICAL INFORMATICS 39.2 (2006): 147-159.
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2004 | Bielefelder E-Dissertation | PUB-ID: 2302210
Chen, Ming. In silico systems analysis of biopathways. Bielefeld (Germany): Bielefeld University, 2004.
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2004 | Bielefelder E-Dissertation | PUB-ID: 2302849
Töpel, Thoralf. Untersuchung von Life-Science-Datenbeständen zur Identifikation von Genotyp-Phänotyp-Korrelationen. Bielefeld (Germany): Bielefeld University, 2004.
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2003 | Bielefelder E-Dissertation | PUB-ID: 2301983
Köhler, Jacob. SEMEDA (Semantic Meta-Database) : ontology based semantic integration of biological databases. Bielefeld (Germany): Bielefeld University, 2003.
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2003 | Bielefelder E-Dissertation | PUB-ID: 2303583
Evers, Dirk J. RNA folding via algebraic dynamic programming. Bielefeld (Germany): Bielefeld University, 2003.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1609306
Vorhölter, Frank-Jörg, Thias, T., Meyer, F., Bekel, T., Kaiser, O., Pühler, Alfred, and Niehaus, Karsten. “Comparison of two Xanthomonas campestris pathovar campestris genomes revealed differences in their gene composition”. Journal of Biotechnology 106.2-3 (2003): 193-202.
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2003 | Bielefelder E-Dissertation | PUB-ID: 2304461
Choudhuri, Jomuna Veronica. Bioinformatics approaches to large scale genome comparison, including the identification of conserved noncoding regions. Bielefeld (Germany): Bielefeld University, 2003.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1895035
Kalinowski, Jörn, Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., Goesmann, Alexander, Hartmann, M., Huthmacher, K., Kramer, R., Linke, Burkhard, McHardy, A. C., Meyer, F., Mockel, B., Pfefferle, W., Pühler, Alfred, Rey, D. A., Rückert, Christian, Rupp, O., Sahm, H., Wendisch, Volker F., Wiegrabe, I., and Tauch, Andreas. “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins”. Journal of Biotechnology 104.1-3 (2003): 5-25.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2003 | Report | PUB-ID: 1970477
Bergeron, Anne, and Stoye, Jens. On the Similarity of Sets of Permutations and its Applications to Genome Comparison. Bielefeld: Technische Fakultät der Universität Bielefeld, 2003. Forschungsberichte.
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2001 | Bielefelder E-Dissertation | PUB-ID: 2306041
Meyer, Folker. GENDB : a second generation genome annotation system. Bielefeld (Germany): Bielefeld University, 2001.
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