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71 Publikationen

2018 | Zeitschriftenaufsatz | PUB-ID: 2917296
Wittchen, M., Busche, T., Gaspar, A.H., Lee, J.H., Ton-That, H., Kalinowski, J., Tauch, A.: Transcriptome sequencing of the human pathogen Corynebacterium diphtheriae NCTC 13129 provides detailed insights into its transcriptional landscape and into DtxR-mediated transcriptional regulation. BMC Genomics. 19, : 82 (2018).
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2018 | Zeitschriftenaufsatz | PUB-ID: 2917042
Kranz, A., Busche, T., Vogel, A., Usadel, B., Kalinowski, J., Bott, M., Polen, T.: RNAseq analysis of alpha-proteobacterium Gluconobacter oxydans 621H. BMC GENOMICS. 19, : 17 (2018).
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2018 | Zeitschriftenaufsatz | PUB-ID: 2920680
Adamek, M., Alanjary, M., Sales-Ortells, H., Goodfellow, M., Bull, A.T., Winkler, A., Wibberg, D., Kalinowski, J., Ziemert, N.: Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species. BMC GENOMICS. 19, : 15 (2018).
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2017 | Zeitschriftenaufsatz | PUB-ID: 2908531
Hersemann, L., Wibberg, D., Blom, J., Goesmann, A., Widmer, F., Vorhölter, F.-J., Koelliker, R.: Comparative genomics of host adaptive traits in Xanthomonas translucens pv. graminis. BMC GENOMICS. 18, : 35 (2017).
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2016 | Zeitschriftenaufsatz | PUB-ID: 2917144
Wibberg, D., Andersson, L., Tzelepis, G., Rupp, O., Blom, J., Jelonek, L., Pühler, A., Fogelqvist, J., Varrelmann, M., Schlüter, A., Dixelius, C.: Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes. BMC Genomics. 17, : 245 (2016).
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2016 | Zeitschriftenaufsatz | PUB-ID: 2901383
Moghadam, M.S., Albersmeier, A., Winkler, A., Cimmino, L., Rise, K., Hohmann-Marriott, M.F., Kalinowski, J., Rückert, C., Wentzel, A., Lale, R.: Isolation and genome sequencing of four Arctic marine Psychrobacter strains exhibiting multicopper oxidase activity. BMC Genomics. 17, 117 (2016).
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2016 | Zeitschriftenaufsatz | PUB-ID: 2906720
Nguyen, T.V., Wibberg, D., Battenberg, K., Blom, J., Vanden Heuvel, B., Berry, A.M., Kalinowski, J., Pawlowski, K.: An assemblage of Frankia Cluster II strains from California contains the canonical nod genes and also the sulfotransferase gene nodH. BMC Genomics. 17, : 796 (2016).
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2015 | Zeitschriftenaufsatz | PUB-ID: 2900131
Pauli, M., Chakarov, N., Rupp, O., Kalinowski, J., Goesmann, A., Sorenson, M., Krüger, O., Hoffman, J.: De novo assembly of the dual transcriptomes of a polymorphic raptor species and its malarial parasite. BMC Genomics. 16, : 1038 (2015).
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2015 | Zeitschriftenaufsatz | PUB-ID: 2717880
Schierenbeck, L., Ries, D., Rogge, K., Grewe, S., Weisshaar, B., Kruse, O.: Fast forward genetics to identify mutations causing a high light tolerant phenotype in Chlamydomonas reinhardtii by whole-genome-sequencing. BMC Genomics. 16, : 57 (2015).
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2015 | Zeitschriftenaufsatz | PUB-ID: 2706344
Irla, M., Neshat, A., Brautaset, T., Rückert, C., Kalinowski, J., Wendisch, V.F.: Transcriptome analysis of thermophilic methylotrophic *Bacillus methanolicus* MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape. BMC Genomics. 16, : 73 (2015).
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2015 | Zeitschriftenaufsatz | PUB-ID: 2736454
Martinez-Moya, P., Niehaus, K., Alcaino, J., Baeza, M., Cifuentes, V.: Proteomic and metabolomic analysis of the carotenogenic yeast Xanthophyllomyces dendrorhous using different carbon sources. BMC Genomics. 16, : 289 (2015).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2713717
Kianianmomeni, A., Ong, C.S., Rätsch, G., Hallmann, A.: Genome-wide analysis of alternative splicing in Volvox carteri. BMC Genomics. 15, 1117 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2687033
Dörr, D., Stoye, J., Böcker, S., Jahn, K.: Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics. 15, S2 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2681784
Oelze, M.-L., Muthuramalingam, M., Vogel, M.O., Dietz, K.-J.: The link between transcript regulation and de novo protein synthesis in the retrograde high light acclimation response of Arabidopsis thaliana. BMC Genomics. 15, 320 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2699503
Kianianmomeni, A.: Cell-type specific light-mediated transcript regulation in the multicellular alga Volvox carteri. BMC Genomics. 15, 764 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2699107
Rebets, Y., Tokovenko, B., Lushchyk, I., Rückert, C., Zaburannyi, N., Bechthold, A., Kalinowski, J., Luzhetskyy, A.: Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae. BMC genomics. 15, 885 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2674171
Dubos, C., Kelemen, Z., Sebastian, A., Bülow, L., Huep, G., Xu, W., Grain, D., Salsac, F., Brousse, C., Lepiniec, L., Weisshaar, B., Contreras-Moreira, B., Hehl, R.: Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC genomics. 15, : 317 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2658490
Dziewit, L., Czarnecki, J., Wibberg, D., Radlinska, M., Mrozek, P., Szymczak, M., Schlüter, A., Pühler, A., Bartosik, D.: Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids. BMC Genomics. 15, : 124 (2014).
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2014 | Zeitschriftenaufsatz | PUB-ID: 2710884
Popik, O.V., Saik, O.V., Petrovskiy, E.D., Sommer, B., Hofestädt, R., Lavrik, I.N., Ivanisenko, V.A.: Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions. BMC Genomics. 15, S7 (2014).
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2013 | Zeitschriftenaufsatz | PUB-ID: 2556267
Hoffman, J., Thorne, M.A., Trathan, P.N., Forcada, J.: Transcriptome of the dead: characterisation of immune genes and marker development from necropsy samples in a free-ranging marine mammal. BMC Genomics. 14, 52 (2013).
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