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50 Publikationen

2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919006
Rubert, D., et al., 2018. Computing the family-free DCJ similarity. BMC Bioinformatics, 19(Suppl. 6): 152.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2910493
Romano, P., et al., 2017. The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes. BMC BIOINFORMATICS, 18: 101.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907670
Feijão, P., & Soares de Araujo, F.E., 2016. Fast ancestral gene order reconstruction of genomes with unequal gene content. BMC Bioinformatics, 17(S14): 413.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775617
Stadermann, K.B., Weisshaar, B., & Holtgräwe, D., 2015. SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome. BMC Bioinformatics, 16: 295.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764888
Janssen, S., & Giegerich, R., 2015. Ambivalent covariance models. BMC Bioinformatics, 16: 178.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900856
Feijão, P., Martinez, F., & Thévenin, A., 2015. On the distribution of cycles and paths in multichromosomal breakpoint graphs and the expected value of rearrangement distance. BMC Bioinformatics, 16(Suppl 19): S1.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2783101
Feijão, P., 2015. Reconstruction of ancestral gene orders using intermediate genomes. BMC Bioinformatics, 16(Suppl 14): S3.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575011
Ander, C., et al., 2013. metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences. BMC Bioinformatics, 14(Suppl 5: Proc. of RECOMB-Seq 2013), p S2.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611633
Jahn, K., et al., 2013. Statistics for approximate gene clusters. BMC Bioinformatics, 14(Suppl 15: Proc. of RECOMB-CG 2013), p S14.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642
Dörr, D., Thévenin, A., & Stoye, J., 2012. Gene family assignment-free comparative genomics. BMC Bioinformatics, 13(Suppl 19: Proc. of RECOMB-CG 2012), p S3.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239
Hoffmann, N., et al., 2012. Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. BMC Bioinformatics, 13(1), p 21.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553300
Manuch, J., et al., 2012. Linearization of ancestral multichromosomal genomes. BMC Bioinformatics, 13(Proc. of RECOMB-CG 2012).
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2547307
El-Kalioby, M., et al., 2012. Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package. BMC Bioinformatics, 13(Suppl 17), p S22.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2410526
Janssen, S., et al., 2011. Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction. BMC Bioinformatics, 12(1), p 429.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2300082
Loyek, C., et al., 2011. BIOIMAX - A Web 2.0 approach for easy exploratory and collaborative access to multivariate bioimage data. BMC Bioinformatics, 12(1), p 297.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2603576
Thomas, P.E., et al., 2011. Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers. BMC Bioinformatics, 12(Suppl 4), p S4.
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2329973
Wittler, R., & Chauve, C., 2011. Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes. BMC Bioinformatics, 12(Suppl. 9), p S21.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2425310
Wolfsheimer, S., et al., 2011. Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling. BMC Bioinformatics, 12(1), p 47-2105.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2091779
Hufsky, F., et al., 2011. Swiftly Computing Center Strings. BMC Bioinformatics, 12(1), p 106.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2906810
Bremges, A., Schirmer, S., & Giegerich, R., 2010. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics, 11(1): 222.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2316624
Gurtowski, J., et al., 2010. Geoseq: a tool for dissecting deep-sequencing datasets. BMC Bioinformatics, 11(1), p 506.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785512
Bremges, A., Schirmer, S., & Giegerich, R., 2010. Fine-tuning structural RNA alignments in the twilight zone. BMC Bioinformatics, 11(1), p 222.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2603504
Corinna, K., Klinger, R., & Hofmann-Apitius, M., 2009. Identification of Histone Modifications in Biomedical Text for Supporting Epigenomic Research. BMC Bioinformatics, 10(Suppl 1), p S28.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783187
Blom, J., et al., 2009. EDGAR: a software framework for the comparative analysis of prokaryotic genomes. BMC Bioinformatics, 10(1): 154.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314
Diaz, N.N., et al., 2009. TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach. BMC Bioinformatics, 10(1), p 56.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321
Dondrup, M., et al., 2009. EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data. BMC Bioinformatics, 10(1): 50.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589098
Gerlach, W., et al., 2009. WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads. BMC Bioinformatics, 10(1), p 430.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020
Lamprecht, A.-L., et al., 2008. GeneFisher-P: variations of GeneFisher as processes in Bio-jETI. BMC Bioinformatics, 9(Suppl 4), p S13.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784025
Herold, J., Kurtz, S., & Giegerich, R., 2008. Efficient computation of absent words in genomic sequences. BMC Bioinformatics, 9(1), p 167.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783280
Tscherepanow, M., Jensen, N., & Kummert, F., 2008. An incremental approach to automated protein localisation. BMC Bioinformatics, 9(1), p 445.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280
Timm, W., et al., 2008. Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. BMC Bioinformatics, 9(1), p 443.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585611
Wei, N., et al., 2008. A machine vision system for automated non-invasive assessment of cell viability via dark field microscopy, wavelet feature selection and classification. BMC Bioinformatics, 9(1), p 449.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893917
Janssen, S., Reeder, J., & Giegerich, R., 2008. Shape based indexing for faster search of RNA family databases. BMC Bioinformatics, 9(1), p 131.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499132
Baumbach, J., 2007. CoryneRegNet 4.0 – A reference database for corynebacterial gene regulatory networks. BMC Bioinformatics, 8(1), p 429.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783712
Kaltenbach, H.-M., Wilke, A., & Böcker, S., 2007. SAMPI: protein identification with mass spectra alignments. BMC Bioinformatics, 8(1), p 102.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783743
Baumbach, J., 2007. CoryneRegNet 4.0: a reference database for corynebacterial gene regulatory networks. BMC Bioinformatics, 8(1), p 429.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784011
Wittkop, T., et al., 2007. Large scale clustering of protein sequences with FORCE - a layout based heuristic for weighted cluster editing. BMC Bioinformatics, 8(1), p 396.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773701
Köhler, J., et al., 2006. Quality control for terms and definitions in ontologies and taxonomies. BMC Bioinformatics, 7(1), p 212.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773864
Beckstette, M., et al., 2006. Fast index based algorithms and software for matching position specific scoring matrices. BMC Bioinformatics, 7(1), p 389.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773871
Seibel, P.N., et al., 2006. XML schemas for common bioinformatic data types and their application in workflow systems. BMC Bioinformatics, 7(1), p 490.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773640
Steffen, P., & Giegerich, R., 2006. Correction: Versatile and declarative dynamic programming using pair algebras. BMC Bioinformatics, 7(1), p 214.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1599756
Spitzer, M., et al., 2006. IsoSVM - Distinguishing isoforms and paralogs on the protein level. BMC Bioinformatics, 7(1), p 110.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1775168
Krause, A., Stoye, J., & Vingron, M., 2005. Large scale hierarchical clustering of protein sequences. BMC Bioinformatics, 6(1), p 15.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773595
Reeder, J., Steffen, P., & Giegerich, R., 2005. Effective ambiguity checking in biosequence analysis. BMC Bioinformatics, 6(1), p 153.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773598
Steffen, P., & Giegerich, R., 2005. Versatile and declarative dynamic programming using pair algebras. BMC Bioinformatics, 6(1), p 224.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773554
Pollard, D.A., et al., 2004. Correction: Benchmarking tools for the alignment of functional noncoding DNA. BMC Bioinformatics, 5(1), p 73.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773758
Reeder, J., & Giegerich, R., 2004. Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. BMC Bioinformatics, 5(1), p 104.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773312
Pollard, D.A., et al., 2004. Benchmarking tools for the alignment of functional noncoding DNA. BMC Bioinformatics, 5(1), p 6.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773747
Gardner, P.P., & Giegerich, R., 2004. A comprehensive comparison of comparative RNA structure prediction approaches. BMC Bioinformatics, 5(1), p 140.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773767
Brudno, M., et al., 2003. Fast and sensitive multiple alignment of large genomic sequences. BMC Bioinformatics, 4(1), p 66.
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