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63 Publikationen

2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936939
Sharifi-Noghabi, Hossein, Zolotareva, Olga, Collins, Colin C., and Ester, Martin. 2019. “MOLI: multi-omics late integration with deep neural networks for drug response prediction”, Bioinformatics, 35 (14): I501-I509.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935584
Theorell, Axel, Seiffarth, Johannes, Grünberger, Alexander, and Noeh, Katharina. 2019. “When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis”. BIOINFORMATICS 35 (7): 1221-1228.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2917896
Lux, Markus, Brinkman, Ryan Remy, Chauve, Cedric, Laing, Adam, Lorenc, Anna, Abeler-Dörner, Lucie, and Hammer, Barbara. 2018. “flowLearn: Fast and precise identification and quality checking of cell populations in flow cytometry”. Bioinformatics.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
Huang, Liren, Krüger, Jan, and Sczyrba, Alexander. 2018. “Analyzing large scale genomic data on the cloud with Sparkhit”. Bioinformatics 34 (9): 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933892
Dirmeier, Simon, Fuchs, Christiane, Mueller, Nikola S, and Theis, Fabian J. 2017. “netReg: network-regularized linear models for biological association studies”. Bioinformatics 34 (5): 896-898.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918707
Beier, Sebastian, Thiel, Thomas, Münch, Thomas, Scholz, Uwe, and Mascher, Martin. 2017. “MISA-web: a web server for microsatellite prediction”. Bioinformatics 33 (16): 2583-2585.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901729
Bremges, Andreas, Singer, Esther, Woyke, Tanja, and Sczyrba, Alexander. 2016. “MeCorS: Metagenome-enabled error correction of single cell sequencing reads”. Bioinformatics 32 (14): 2199-2201.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764612 OA
Wittler, Roland, Marschall, Tobias, Schönhuth, Alexander, and Makinen, Veli. 2015. “Repeat- and error-aware comparison of deletions”. Bioinformatics 31 (18): 2947-2954.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker, Rolf, Stadermann, Kai Bernd, Doppmeier, Daniel, Kalinowski, Jörn, Stoye, Jens, Straube, Jasmin, Winnebald, Jörn, and Goesmann, Alexander. 2014. “ReadXplorer - Visualization and Analysis of Mapped Sequences”. Bioinformatics 30 (16): 2247-2254.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
Hoffmann, Nils, Wilhelm, Mathias, Doebbe, Anja, Niehaus, Karsten, and Stoye, Jens. 2014. “BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry”. Bioinformatics 30 (7): 988-995.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700599
Janssen, Stefan, and Giegerich, Robert. 2014. “The RNA shapes studio”. Bioinformatics 31 (3): 423-425.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2551798
Sauthoff, Georg, Mohl, Mathias, Janssen, Stefan, and Giegerich, Robert. 2013. “Bellman's GAP -- a Language and Compiler for Dynamic Programming in Sequence Analysis”. Bioinformatics 29 (5): 551-560.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
Kessler, Nikolas, Bonte, Anja, Langenkämper, Georg, Niehaus, Karsten, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2013. “MeltDB 2.0 - Advances of the metabolomics software system”. Bioinformatics 29 (19): 2452-2459.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2510984
Hilker, Rolf, Sickinger, Corinna, Pedersen, Christian N. S., and Stoye, Jens. 2012. “UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ”. Bioinformatics 28 (19): 2509-2511.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2496829
Cox, Anthony J, Bauer, Markus J, Jakobi, Tobias, and Rosone, Giovanna. 2012. “Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform”. Bioinformatics 28 (11): 1415-1419.
PUB | DOI | WoS | PubMed | Europe PMC | arXiv
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783 OA
Kölling, Jan, Langenkämper, Daniel, Sylvie, Abouna, Michale, Khan, and Nattkemper, Tim Wilhelm. 2012. “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”. Bioinformatics 28 (8): 1143-1150.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2401665
Hazelhurst, Scott, and Lipták, Zsuzsanna. 2011. “KABOOM! A new suffix-array based algorithm for clustering expression data”. Bioinformatics 27 (24): 3348-3355.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2408590
Huang, Donglin, Huang, Yiling, Bai, Youhuang, Chen, Dijun, Hofestädt, Ralf, Klukas, Cristian, and Chen, Ming. 2011. “MyBioNet: interactively visualize, edit and merge biological networks on the Web”. Bioinformatics 27 (23): 3321-3322.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Blom, Jochen, Jakobi, Tobias, Doppmeier, Daniel, Jaenicke, Sebastian, Kalinowski, Jörn, Stoye, Jens, and Goesmann, Alexander. 2011. “Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming”. Bioinformatics 27 (10): 1351-1358.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307115
Dutilh, Bas E., Jurgelenaite, Rasa, Szklarczyk, Radek, van Hijum, Sacha A. F. T., Harhangi, Harry R., Schmid, Markus, de Wild, Bart, et al. 2011. “FACIL: Fast and Accurate Genetic Code Inference and Logo”. Bioinformatics 27 (14): 1929-1933.
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