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63 Publikationen

2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2094556
Schleif, F. - M., Riemer, T., Boerner, U., Schnapka-Hille, L., and Cross, M. (2011). Genetic algorithm for shift-uncertainty correction in 1-D NMR-based metabolite identifications and quantifications. Bioinformatics 27, 524-533.
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
Linke, B., Giegerich, R., and Goesmann, A. (2011). Conveyor: a workflow engine for bioinformatic analyses. Bioinformatics 27, 903-911.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893946 OA
Janssen, S., and Giegerich, R. (2010). Faster computation of exact RNA shape probabilities. Bioinformatics 26, 632-639.
PUB | Datei | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588556
Husemann, P., and Stoye, J. (2010). r2cat: Synteny Plots and Comparative Assembly. Bioinformatics 26, 570-571.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2426487
Böcker, S., Lipták, Z., Pervukhin, A., and Letzel, M. C. (2009). SIRIUS: decomposing isotope patterns for metabolite identification. Bioinformatics 25, 218-224.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531
Albaum, S., Neuweger, H., Fraenzel, B., Lange, S., Mertens, D., Troetschel, C., Wolters, D., Kalinowski, J., Nattkemper, T. W., and Goesmann, A. (2009). Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments. Bioinformatics 25, 3128-3134.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1590204
Brudno, M., Medvedev, P., Stoye, J., and De La Vega, F. M. (2009). A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG). BIOINFORMATICS 25, 2863-2864.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1590210
Dutilh, B. E., Huynen, M. A., and Strous, M. (2009). Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly. BIOINFORMATICS 25, 2878-2881.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591319
Hoffmann, N., and Stoye, J. (2009). ChromA: signal-based retention time alignment for chromatography-mass spectrometry data. Bioinformatics 25, 2080-2081.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589458
Beckstette, M., Homann, R., Giegerich, R., and Kurtz, S. (2009). Significant speedup of database searches with HMMs by search space reduction with PSSM family models. Bioinformatics 25, 3251-3258.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634374
Homann, R., Fleer, D., Giegerich, R., and Rehmsmeier, M. (2009). mkESA: enhanced suffix array construction tool. Bioinformatics 25, 1084-1085.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2603465
Klinger, R., Kolarik, C., Fluck, J., Hofmann-Apitius, M., and Friedrich, C. M. (2008). Detection of IUPAC and IUPAC-like Chemical Names. Bioinformatics 24, i268-i276.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636699
Neuweger, H., Albaum, S., Dondrup, M., Persicke, M., Watt, T., Niehaus, K., Stoye, J., and Goesmann, A. (2008). MeltDB: a software platform for the analysis and integration of metabolomics experiment data. Bioinformatics 24, 2726-2732.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592737
Boecker, S., Lipták, Z., Martin, M., Pervukhin, A., and Sudek, H. (2008). DECOMP - from interpreting mass spectrometry peaks to solving the money changing problem. BIOINFORMATICS 24, 591-593.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587304
Hazelhurst, S., Hide, W., Lipták, Z., Nogueira, R., and Starfield, R. (2008). An overview of the wcd EST clustering tool. BIOINFORMATICS 24, 1542-1546.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052
Martin, C., Diaz, N. N., Ontrup, J., and Nattkemper, T. W. (2008). Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification. Bioinformatics 24, 1568-1574.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1594917
Välimäki, N., Gerlach, W., Dixit, K., and Mäkinen, V. (2007). Compressed suffix tree - a basis for genome-scale sequence analysis. BIOINFORMATICS 23, 629-630.
PUB | DOI | WoS | PubMed | Europe PMC
 
2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1593132
Reeder, J., Reeder, J., and Giegerich, R. (2007). Locomotif: from graphical motif description to RNA motif search. Bioinformatics 23, I392-I400.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1631967
Schliep, A., and Rahmann, S. (2006). Decoding non-unique oligonucleotide hybridization experiments of targets related by a phylogenetic tree. Bioinformatics 22, e424-e430.
PUB | DOI | WoS | PubMed | Europe PMC
 
2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499691
Köhler, J., Baumbach, J., Taubert, J., Specht, M., Skusa, A., Rüegg, A., Rawlings, C., Verrier, P., and Philippi, S. (2006). Graph-based analysis and visualization of experimental results with ONDEX. Bioinformatics 22, 1383-1390.
PUB | DOI | WoS | PubMed | Europe PMC
 

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