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58 Publikationen

2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936939
Sharifi-Noghabi, Hossein, Zolotareva, Olga, Collins, Colin C., and Ester, Martin. 2019. “MOLI: multi-omics late integration with deep neural networks for drug response prediction”, Bioinformatics, 35 (14): I501-I509.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935584
Theorell, Axel, Seiffarth, Johannes, Grünberger, Alexander, and Noeh, Katharina. 2019. “When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis”. BIOINFORMATICS 35 (7): 1221-1228.
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2018 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2917896
Lux, Markus, Brinkman, Ryan Remy, Chauve, Cedric, Laing, Adam, Lorenc, Anna, Abeler-Dörner, Lucie, and Hammer, Barbara. 2018. “flowLearn: Fast and precise identification and quality checking of cell populations in flow cytometry”. Bioinformatics.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933892
Dirmeier, Simon, Fuchs, Christiane, Mueller, Nikola S, and Theis, Fabian J. 2017. “netReg: network-regularized linear models for biological association studies”. Bioinformatics 34 (5): 896-898.
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2017 | Zeitschriftenaufsatz | PUB-ID: 2918897
Thijssen, Bram, Dijkstra, Tjeerd M. H., Heskes, Tom, and Wessels, Lodewyk F. A. 2017. “Bayesian data integration for quantifying the contribution of diverse measurements to parameter estimates”. Bioinformatics 34 (5): 803-811.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912555
Helfrich, Stefan, Azzouzi, Charaf E., Probst, Christopher, Seiffarth, Johannes, Grünberger, Alexander, Wiechert, Wolfgang, Kohlheyer, Dietrich, and Nöh, Katharina. 2015. “Vizardous: interactive analysis of microbial populations with single cell resolution”. Bioinformatics 31 (23): 3875-3877.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker, Rolf, Stadermann, Kai Bernd, Doppmeier, Daniel, Kalinowski, Jörn, Stoye, Jens, Straube, Jasmin, Winnebald, Jörn, and Goesmann, Alexander. 2014. “ReadXplorer - Visualization and Analysis of Mapped Sequences”. Bioinformatics 30 (16): 2247-2254.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
Hoffmann, Nils, Wilhelm, Mathias, Doebbe, Anja, Niehaus, Karsten, and Stoye, Jens. 2014. “BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry”. Bioinformatics 30 (7): 988-995.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700599
Janssen, Stefan, and Giegerich, Robert. 2014. “The RNA shapes studio”. Bioinformatics 31 (3): 423-425.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2551798
Sauthoff, Georg, Mohl, Mathias, Janssen, Stefan, and Giegerich, Robert. 2013. “Bellman's GAP -- a Language and Compiler for Dynamic Programming in Sequence Analysis”. Bioinformatics 29 (5): 551-560.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2610129
Kessler, Nikolas, Bonte, Anja, Langenkämper, Georg, Niehaus, Karsten, Goesmann, Alexander, and Nattkemper, Tim Wilhelm. 2013. “MeltDB 2.0 - Advances of the metabolomics software system”. Bioinformatics 29 (19): 2452-2459.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2510984
Hilker, Rolf, Sickinger, Corinna, Pedersen, Christian N. S., and Stoye, Jens. 2012. “UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ”. Bioinformatics 28 (19): 2509-2511.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2496829
Cox, Anthony J, Bauer, Markus J, Jakobi, Tobias, and Rosone, Giovanna. 2012. “Large-scale compression of genomic sequence databases with the Burrows-Wheeler transform”. Bioinformatics 28 (11): 1415-1419.
PUB | DOI | WoS | PubMed | Europe PMC | arXiv
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2481783 OA
Kölling, Jan, Langenkämper, Daniel, Sylvie, Abouna, Michale, Khan, and Nattkemper, Tim Wilhelm. 2012. “WHIDE - A web tool for visual data mining colocation patterns in multivariate bioimages”. Bioinformatics 28 (8): 1143-1150.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2401665
Hazelhurst, Scott, and Lipták, Zsuzsanna. 2011. “KABOOM! A new suffix-array based algorithm for clustering expression data”. Bioinformatics 27 (24): 3348-3355.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2408590
Huang, Donglin, Huang, Yiling, Bai, Youhuang, Chen, Dijun, Hofestädt, Ralf, Klukas, Cristian, and Chen, Ming. 2011. “MyBioNet: interactively visualize, edit and merge biological networks on the Web”. Bioinformatics 27 (23): 3321-3322.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Blom, Jochen, Jakobi, Tobias, Doppmeier, Daniel, Jaenicke, Sebastian, Kalinowski, Jörn, Stoye, Jens, and Goesmann, Alexander. 2011. “Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming”. Bioinformatics 27 (10): 1351-1358.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307115
Dutilh, Bas E., Jurgelenaite, Rasa, Szklarczyk, Radek, van Hijum, Sacha A. F. T., Harhangi, Harry R., Schmid, Markus, de Wild, Bart, et al. 2011. “FACIL: Fast and Accurate Genetic Code Inference and Logo”. Bioinformatics 27 (14): 1929-1933.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2094556
Schleif, Frank-Michael, Riemer, T., Boerner, U., Schnapka-Hille, L., and Cross, M. 2011. “Genetic algorithm for shift-uncertainty correction in 1-D NMR-based metabolite identifications and quantifications”. Bioinformatics 27 (4): 524-533.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093578
Linke, Burkhard, Giegerich, Robert, and Goesmann, Alexander. 2011. “Conveyor: a workflow engine for bioinformatic analyses”. Bioinformatics 27 (7): 903-911.
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