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55 Publikationen

2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2931524
Schult, F., et al., 2018. Effect of UV irradiation on Sulfolobus acidocaldarius and involvement of the general transcription factor TFB3 in the early UV response. NUCLEIC ACIDS RESEARCH, 46(14), p 7179-7192.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920779 OA
Baier, T., et al., 2018. Intron-containing algal transgenes mediate efficient recombinant gene expression in the green microalga Chlamydomonas reinhardtii. Nucleic Acids Research, 46(13), p 6909-6919.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905930
Winter, S., et al., 2016. Finding approximate gene clusters with GECKO 3. Nucleic Acids Research, 44(20), p 9600-9610.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2694724
Köster, T., et al., 2014. Regulation of pri-miRNA processing by the hnRNP-like protein AtGRP7 in Arabidopsis. Nucleic acids research, 42(15), p 9925-9936.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934072
Schneider, K., et al., 2013. Dissection of cell cycle–dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling. Nucleic Acids Research, 41(9), p 4860-4876.
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2579031
Wobbe, L., & Nixon, P.J., 2013. The mTERF protein MOC1 terminates mitochondrial DNA transcription in the unicellular green alga Chlamydomonas reinhardtii. Nucleic Acids Research, 41(13), p 6553-6567.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448791 OA
Kleinbölting, N., et al., 2012. GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database. Nucleic Acids Research, 40(D1), p D1211-D1215.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548847
Streitner, C., et al., 2012. An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana. Nucleic acids research, 40(22), p 11240-11255.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2471873
Pauling, J., et al., 2012. CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands. Nucleic Acids Research, 40(D1), p D610-D614.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2528126
Mönke, G., et al., 2012. Toward the identification and regulation of the Arabidopsis thaliana ABI3 regulon. Nucleic Acids Research, 40(17), p 8240-8254.
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2523617
Lobo, F.P., et al., 2012. KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa. Nucleic Acids Research, 40(W1), p W491-W497.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2298170 OA
Gerlach, W., & Stoye, J., 2011. Taxonomic classification of metagenomic shotgun sequences with CARMA3. Nucleic Acids Res, 39(14), p e91.
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1987138
Grewe, F., et al., 2011. A unique transcriptome: 1782 positions of RNA editing alter 1406 codon identities in mitochondrial mRNAs of the lycophyte Isoetes engelmannii. Nucleic Acids Research, 39(7), p 2890-2902.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1590766
Grewe, F., et al., 2009. A trans-splicing group I intron and tRNA-hyperediting in the mitochondrial genome of the lycophyte Isoetes engelmannii. Nucleic Acids Research, 37(15), p 5093-5104.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591178
Krawczyk, J., et al., 2009. From Corynebacterium glutamicum to Mycobacterium tuberculosis-towards transfers of gene regulatory networks and integrated data analyses with MycoRegNet. NUCLEIC ACIDS RESEARCH, 37(14), p e97.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591539 OA
Alves jun., L., et al., 2009. Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana. Nucleic Acids Research, 37(12), p 4010-4021.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783375 OA
Schöning, J.C., et al., 2008. Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis. Nucleic Acids Research, 36(22), p 6977-6987.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586785 OA
Oehm, S., et al., 2008. Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms. NUCLEIC ACIDS RESEARCH, 36(Web Server), p W433-W437.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783357 OA
Theis, C., Reeder, J., & Giegerich, R., 2008. KnotInFrame: prediction of –1 ribosomal frameshift events. Nucleic Acids Research, 36(18), p 6013-6020.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783364 OA
Krause, L., et al., 2008. Phylogenetic classification of short environmental DNA fragments. Nucleic Acids Research, 36(7), p 2230-2239.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1596131 OA
Li, Y., et al., 2007. GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions. Nucleic Acids Research, 35(Database), p D874-D878.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587974 OA
Reeder, J., Steffen, P., & Giegerich, R., 2007. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows. NUCLEIC ACIDS RESEARCH, 35(Web Server), p W320-W324.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587979 OA
Kaiser, A., Krüger, J., & Evers, D.J., 2007. RNA Movies 2: sequential animation of RNA secondary structures. NUCLEIC ACIDS RESEARCH, 35(Web Server), p W330-W334.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783345 OA
Krause, L., et al., 2007. GISMO - gene identification using a support vector machine for ORF classification. Nucleic Acids Research, 35(2), p 540-549.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2383467
Krüger, J., & Rehmsmeier, M., 2006. RNAhybrid: microRNA target prediction easy, fast, and flexible. Nucleic Acids Research, 34(Web Server), p W451-W454.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773878 OA
Krüger, J., & Rehmsmeier, M., 2006. RNAhybrid: microRNA target prediction easy, fast and flexible. Nucleic Acids Research, 34(Web Server), p W451-W454.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773848 OA
Kim, J., et al., 2006. The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy. Nucleic Acids Research, 34(9), p 2516-2527.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773904 OA
Marme, N., et al., 2006. Identification of single-point mutations in mycobacterial 16S rRNA sequences by confocal single-molecule fluorescence spectroscopy. Nucleic Acids Research, 34(13), p e90.
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2006 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773916 OA
Fiedler, T., & Rehmsmeier, M., 2006. jPREdictor: a versatile tool for the prediction of cis-regulatory elements. Nucleic Acids Research, 34(Web Server), p W546-W550.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773695 OA
Röpcke, S., et al., 2005. T-Reg Comparator: an analysis tool for the comparison of position weight matrices. Nucleic Acids Research, 33(Web Server), p W438-W441.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2308944
Ehrich, M., Böcker, S., & Boom van den, D., 2005. Multiplexed discovery of sequence polymorphisms using base-specific cleavage and MALDI-TOF MS. Nucleic Acids Res., 33(4), p e38.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773652 OA
Overbeek, R., et al., 2005. The subsystems approach to genome annotation and its use in the Project to Annotate 1000 Genomes. Nucleic Acids Research, 33(17), p 5691-5702.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773690 OA
Ehrich, M., Böcker, S., & Boom, D. van den, 2005. Multiplexed discovery of sequence polymorphisms using base-specific cleavage and MALDI-TOF MS. Nucleic Acids Research, 33(4), p e38.
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2005 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773644 OA
Goesmann, A., et al., 2005. BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. Nucleic Acids Research, 33(Web Server), p W710-W716.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607400 OA
Taher, L., et al., 2004. AGenDA: gene prediction by cross-species sequence comparison. Nucleic Acids Research, 32(Web Server), p W305-W308.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1607394 OA
Krüger, J., et al., 2004. e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences. NUCLEIC ACIDS RESEARCH, 32(Web Server), p W301-W304.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1606393 OA
Giegerich, R., Voss, B., & Rehmsmeier, M., 2004. Abstract shapes of RNA. Nucleic Acids Research, 32(16), p 4843-4851.
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2004 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773836 OA
Chen, M., Lin, S., & Hofestädt, R., 2004. STCDB: Signal Transduction Classification Database. Nucleic Acids Research, 32(90001), p D456-D458.
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2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773844 OA
Sczyrba, A., et al., 2003. RNA-related tools on the Bielefeld Bioinformatics Server. Nucleic Acids Research, 31(13), p 3767-3770.
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
2003 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773880 OA
Meyer, F., et al., 2003. GenDB - an open source genome annotation system for prokaryote genomes. Nucleic Acids Research, 31(8), p 2187-2195.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773887 OA
Leuchtenberger, S., et al., 2001. Conditional cell ablation by stringent tetracycline-dependent regulation of barnase in mammalian cells. Nucleic Acids Research, 29(16), p 76e-76.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773335 OA
Kurtz, S., et al., 2001. REPuter: the manifold applications of repeat analysis on a genomic scale. Nucleic Acids Research, 29(22), p 4633-4642.
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2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773893 OA
Schneiker-Bekel, S., et al., 2001. The genetic organization and evolution of the broad host range mercury resistance plasmid pSB102 isolated from a microbial population residing in the rhizosphere of alfalfa. Nucleic Acids Res, 29(24), p 5169-5181.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | GenBank
 
2001 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773898 OA
Gräf, S., et al., 2001. HyPaLib: a database of RNAs and RNA structural elements defined by hybrid patterns. Nucleic Acids Research, 29(1), p 196-198.
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2000 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773345 OA
Krause, A., Stoye, J., & Vingron, M., 2000. The SYSTERS protein sequence cluster set. Nucleic Acids Research, 28(1), p 270-272.
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1991 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773962 OA
Hillemann, D., Pühler, A., & Wohlleben, W., 1991. Gene disruption and gene replacement in Streptomyces via single stranded DNA transformation of integration vectors. Nucleic Acids Research, 19(4), p 727-731.
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1990 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1868030
Spiker, S., et al., 1990. Sequence of a histone H2A cDNA from parsley. Nucleic Acids Research, 18(19), p 5897.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375969
Colonna-Romano, S., et al., 1987. Tight linkage of glnA and a putative regulatory gene in Rhizobium leguminosarum. Nucleic Acids Research, 15(5), p 1951-1964.
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1773940 OA
Grönger, P., et al., 1987. Organization and partial sequence of a DNA region of the Rhizobium leguminosarum symbiotic plasmid pRL6JI containing the genes fixABC, nifA, nifB and a novel open reading frame. Nucleic Acids Research, 15(1), p 31-49.
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1987 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1990311
Geisel, J., et al., 1987. Double Msp I RFLP in the human LDL receptor gene. Nucleic Acids Research, 15(9), p 3943.
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