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72 Publikationen

2018 | Zeitschriftenaufsatz | PUB-ID: 2930593
Common ELIXIR Service for Researcher Authentication and Authorisation
Linden M, Prochazka M, Lappalainen I, Bucik D, Vyskocil P, Kuba M, Silén S, Belmann P, Sczyrba A, Newhouse S, Matyska L, et al. (2018)
F1000Research 7: 1199.
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2920777
Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts
Celis JS, Wibberg D, Ramírez-Portilla C, Rupp O, Sczyrba A, Winkler A, Kalinowski J, Wilke T (2018)
GigaScience 7(7): giy075.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2920723
AMBER: Assessment of Metagenome BinnERs
Meyer F, Hofmann P, Belmann P, Garrido-Oter R, Fritz A, Sczyrba A, McHardy AC (2018)
GigaScience: giy069.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2916929
Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
Stolze Y, Bremges A, Maus I, Pühler A, Sczyrba A, Schlüter A (2018)
Microbial Biotechnology 11(4): 667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2920750
Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors
Maus I, Rumming M, Bergmann I, Heeg K, Pohl M, Nettmann E, Jaenicke S, Blom J, Pühler A, Schlüter A, Sczyrba A, et al. (2018)
Biotechnology for Biofuels 11: 167.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2915890
Analyzing large scale genomic data on the cloud with Sparkhit
Huang L, Krüger J, Sczyrba A (2018)
Bioinformatics 34(9): 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2920170
Metagenome, metatranscriptome, and metaproteome approaches unraveled compositions and functional relationships of microbial communities residing in biogas plants
Hassa J, Maus I, Off S, Pühler A, Scherer P, Klocke M, Schlüter A (2018)
Applied Microbiology and Biotechnology 102(12): 5045-5063.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2918275
Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea
Fleming EJ, Woyke T, Donatello AR, Kuypers MMM, Sczyrba A, Littmann S, Emerson D (2018)
Applied and Environmental Microbiology 84(9): e02239-17.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2917037
Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome
Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A (2018)
JOURNAL OF BIOTECHNOLOGY 267: 12-18.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | PUB-ID: 2914959
Invasion ecology applied to inoculation of plant growth promoting bacteria through a novel SIMPER-PCA approach
da Schoren Costa P, Bolzan de Campos S, Albersmeier A, Dirksen P, Pereira Dresseno AL, Andrade Pais dos Santos OJ, Lima Milani KM, Etto RM, Battistus AG, Peres Rodrigues da Costa AC, Martinez de Oliveira AL, et al. (2018)
Plant and Soil 422(1-2): 467-478.
PUB | DOI | WoS
 
2017 | Datenpublikation | PUB-ID: 2914921
Sparkhit evaluation data set
Huang L, Krüger J, Sczyrba A (2017) : Bielefeld University. doi:10.4119/unibi/2914921.
PUB | Dateien verfügbar | DOI
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2916470
The completely annotated genome and comparative genomics of the Peptoniphilaceae bacterium str. ING2-D1G, a novel acidogenic bacterium isolated from a mesophilic biogas reactor
Tomazetto G, Hahnke S, Langer T, Wibberg D, Blom J, Maus I, Pühler A, Klocke M, Schlüter A (2017)
Journal of Biotechnology 257: 178-186.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2910369
Biphasic Study to Characterize Agricultural Biogas Plants by High-Throughput 16S rRNA Gene Amplicon Sequencing and Microscopic Analysis
Maus I, Kim YS, Wibberg D, Stolze Y, Off S, Antonczyk S, Pühler A, Scherer P, Schlüter A (2017)
Journal of Microbiology and Biotechnology 27(2): 321-334.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2909153
Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism
Yu J, Blom J, Sczyrba A, Goesmann A (2017)
Journal of Biotechnology 257: 58-60.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2913556
Bioinformatics for NGS-based metagenomics and the application to biogas research
Jünemann S, Kleinbölting N, Jaenicke S, Henke C, Hassa J, Nelkner J, Stolze Y, Albaum S, Schlüter A, Goesmann A, Sczyrba A, et al. (2017)
Journal of Biotechnology 261(SI): 10-23.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2914367
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
Sczyrba A, Hofmann P, Belmann P, Koslicki D, Janssen S, Dröge J, Gregor I, Majda S, Fiedler J, Dahms E, Bremges A, et al. (2017)
Nature Methods 14(11): 1063-1071.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | PUB-ID: 2911777
Genome sequence of Methanobacterium congolense strain Buetzberg, a hydrogenotrophic, methanogenic archaeon, isolated from a mesophilic industrial-scale biogas plant utilizing bio-waste
Torres Tejerizo GA, Kim YS, Maus I, Wibberg D, Winkler A, Off S, Pühler A, Scherer P, Schlüter A (2017)
Journal of Biotechnology 247: 1-5.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Assembling the microbial dark matter
Bremges A (2016)
Bielefeld: Universität Bielefeld.
PUB | PDF
 
2016 | Zeitschriftenaufsatz | PUB-ID: 2904815
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
Stolze Y, Bremges A, Rumming M, Henkel C, Maus I, Pühler A, Sczyrba A, Schlüter A (2016)
Biotechnology for Biofuels 9: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | PUB-ID: 2907633
acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
Lux M, Krüger J, Rinke C, Maus I, Schlüter A, Woyke T, Sczyrba A, Hammer B (2016)
BMC Bioinformatics 17: 543.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 

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