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3224 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936490
Seeger, B.; Mentz, A.; Knebel, C.; Schmidt, F.; Bednarz, H.; Niehaus, K.; Albaum, S.; Kalinowski, J.; Noll, T.; Steinberg, P.; Marx-Stoelting, P.; Heise, T. (2019): Assessment of mixture toxicity of (tri)azoles and their hepatotoxic effects in vitro by means of omics technologies. Archives of toxicology
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936329
Ismail, M.; Frese, M.; Patschkowski, T.; Ortseifen, V.; Niehaus, K.; Sewald, N. (2019): Flavin-Dependent Halogenases from Xanthomonas campestris pv. campestris B100 Prefer Bromination over Chlorination ADVANCED SYNTHESIS & CATALYSIS,361:(11): 2475-2486.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936315
Kamal, N.; Ochßner, I.; Schwandner, A.; Viehöver, P.; Hausmann, L.; Töpfer, R.; Weisshaar, B.; Holtgräwe, D. (2019): Characterization of genes and alleles involved in the control of flowering time in grapevine. PLoS One,14:(7): e0214703.
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2019 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2936458
Gil Lopez, M.; Irla, M.; Fernandes de Brito, L.; Wendisch, V. F. (Accepted): Characterization of D-arabitol as newly discovered carbon source of Bacillus methanolicus Frontiers in Microbiology
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, L.; März, C.; Burkhardt, L.; Droste, J.; Brandt, D.; Busche, T.; Rosen, W.; Schneiker-Bekel, S.; Persicke, M.; Pühler, A.; Kalinowski, J. (2019): Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110 Microbial Cell Factories,18:114
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936230
Durante, L.; Hübner, W.; Lauersen, K. J.; Remacle, C. (2019): Characterization of the GPR1/FUN34/YaaH protein family in the green microalga Chlamydomonas suggests their role as intracellular membrane acetate channels Plant Direct,3:(6):e00148
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698
Pucker, B.; Holtgräwe, D.; Stadermann, K. B.; Frey, K.; Huettel, B.; Reinhardt, R.; Weisshaar, B. (2019): A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set PLOS ONE,14:(5):e0216233
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2019 | Bielefelder E-Dissertation | PUB-ID: 2935794
Pucker, B. (2019): De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934794
Farr, M.; Ferreira, S.; Al-Dilaimi, A.; Bogeholz, S.; Goesmann, A.; Kalinowski, J.; Knabbe, C.; Faber, L.; Oliveira, J. P.; Rudolph, V. (2019): Fabry disease: Detection of Alu-mediated exon duplication by NGS. Molecular and cellular probes
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936260
Arenas-Lopez, C.; Locker, J.; Orol, D.; Walter, F.; Busche, T.; Kalinowski, J.; Minton, N. P.; Kovacs, K.; Winzer, K. (2019): The genetic basis of 3-hydroxypropanoate metabolism in Cupriavidus necator H16. Biotechnology for biofuels,12
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935892
Loi, V. V.; Huyen, N. T. T.; Busche, T.; Tung, Q. N.; Gruhlke, M. C. H.; Kalinowski, J.; Bernhardt, J.; Slusarenko, A. J.; Antelmann, H. (2019): Staphylococcus aureus responds to allicin by global S-thioallylation - Role of the Brx/BSH/YpdA pathway and the disulfide reductase MerA to overcome allicin stress. Free radical biology & medicine,139: 55-69.
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2019 | Datenpublikation | PUB-ID: 2936278
Pucker, B.; Busche, M.; Viehöver, P.; Weisshaar, B.; Stracke, R. (2019): Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University.
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2019 | Preprint | Veröffentlicht | PUB-ID: 2936299
Busche, M.; Pucker, B.; Viehöver, P.; Weisshaar, B.; Stracke, R. (2019): Genome sequencing of Musa acuminata Dwarf Cavendish reveals a chromosome arm duplication bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936033
Tsolis, K. C.; Hamed, M. B.; Simoens, K.; Koepff, J.; Busche, T.; Rückert, C.; Oldiges, M.; Kalinowski, J.; Anne, J.; Kormanec, J.; Bernaerts, K.; Karamanou, S.; Economou, A. (2019): Secretome Dynamics in a Gram-Positive Bacterial Model MOLECULAR & CELLULAR PROTEOMICS,18:(3): 423-436.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936019
Huennefeld, M.; Persicke, M.; Kalinowski, J.; Frunzke, J. (2019): The MarR-Type Regulator MalR Is Involved in Stress-Responsive Cell Envelope Remodeling in Corynebacterium glutamicum FRONTIERS IN MICROBIOLOGY,10:1039
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936035
Koshla, O. T.; Rokytskyy, I. V.; Ostash, I. S.; Busche, T.; Kalinowski, J.; Moesker, E.; Suessmuth, R. D.; Fedorenko, V. O.; Ostash, B. O. (2019): Secondary Metabolome and Transcriptome of Streptomyces albus J1074 in Liquid Medium SG2 CYTOLOGY AND GENETICS,53:(1): 1-7.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936087
Mudalungu, C. M.; von Torne, W. J.; Voigt, K.; Rückert, C.; Schmitz, S.; Sekurova, O. N.; Zotchev, S. B.; Sussmuth, R. D. (2019): Noursamycins, Chlorinated Cyclohexapeptides Identified from Molecular Networking of Streptomyces noursei NTR-SR4. Journal of natural products,82:(6): 1478-1486.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, P.; Fischer, B.; Krüger, J.; Procházka, M.; Rasche, H.; Prinz, M.; Hanussek, M.; Lang, M.; Bartusch, F.; Gläßle, B.; Krüger, J.; Pühler, A.; Sczyrba, A. (2019): de.NBI Cloud federation through ELIXIR AAI F1000Research,8:842
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936207
Jaeger, D.; Baier, T.; Lauersen, K. J. (2019): Intronserter, an advanced online tool for design of intron containing transgenes Algal Research,42:101588
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570
Castellani, L. G.; Nilsson, J. F.; Wibberg, D.; Schlüter, A.; Pühler, A.; Brom, S.; Pistorio, M.; Tejerizo, G. T. (2019): Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83 Plasmid
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
Pucker, B.; Schilbert, H.; Schumacher, S. F. (2019): Integrating Molecular Biology and Bioinformatics Education Journal of Integrative Bioinformatics
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, J.; Henke, C.; Lin, T. W.; Pätzold, W.; Hassa, J.; Jaenicke, S.; Grosch, R.; Pühler, A.; Sczyrba, A.; Schlüter, A. (2019): Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes Genes,10:(6):424
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda, A.; Feng, T.; Sheehan, H.; Walker‐Hale, N.; Pucker, B.; Lopez‐Nieves, S.; Guo, R.; Brockington, S. (2019): The evolution of betalain biosynthesis in Caryophyllales New Phytologist
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2019 | Herausgeber Sammelwerk | Veröffentlicht | PUB-ID: 2935998
João C. Setubal; Jens Stoye; Bas E. Dutilh (Hrsg.) (2019): Computational Methods for Microbiome Analysis. Lausanne: Frontiers Media.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488
Osterloff, J.; Nilssen, I.; Jarnegren, J.; Van Engeland, T.; Buhl-Mortensen, P.; Nattkemper, T. W. (2019): Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory. Scientific reports,9:6578
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934328
Iszatt, N.; Janssen, S.; Lenters, V.; Dahl, C.; Stigum, H.; Knight, R.; Mandal, S.; Peddada, S.; González, A.; Midtvedt, T.; Eggesbø, M. (2019): Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 month Microbiome,7:(1):34
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J. L.; Lozano, M. J.; Lagares, A.; Fabre, M. L.; Draghi, W. O.; Del Papa, M. F.; Pistorio, M.; Becker, A.; Wibberg, D.; Schlüter, A.; Pühler, A.; Blom, J.; Goesmann, A.; Lagares, A. (2019): Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry mBio,10:(3):e00505-19
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935870
Haas, T.; Graf, M.; Niess, A.; Busche, T.; Kalinowski, J.; Blombach, B.; Takors, R. (2019): Identifying the Growth Modulon of Corynebacterium glutamicum FRONTIERS IN MICROBIOLOGY,10:974
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935582
Noster, J.; Persicke, M.; Chao, T. - C.; Krone, L.; Heppner, B.; Hensel, M.; Hansmeier, N. (2019): Impact of ROS-Induced Damage of TCA Cycle Enzymes on Metabolism and Virulence of Salmonella enterica serovar Typhimurium FRONTIERS IN MICROBIOLOGY,10:762
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556
Verwaaijen, B.; Wibberg, D.; Winkler, A.; Zrenner, R.; Bednarz, H.; Niehaus, K.; Grosch, R.; Pühler, A.; Schlüter, A. (2019): A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani Scientific Reports,9:7221
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935517
Schultenkämper, K.; Fernandes de Brito, L.; Gil Lopez, M.; Brautaset, T.; Wendisch, V. F. (2019): Establishment and application of CRISPR interference to affect sporulation, hydrogen peroxide detoxification and mannitol catabolism in the methylotrophic thermophile Bacillus methanolicus Applied Microbiology and Biotechnology
PUB | DOI | PubMed | Europe PMC
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2935737
Pucker, B.; Feng, T.; Brockington, S. F. (2019): Next generation sequencing to investigate genomic diversity in Caryophyllales bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935580
Baulig, A.; Helmle, I.; Bader, M.; Wolf, F.; Kulik, A.; Al-Dilaimi, A.; Wibberg, D.; Kalinowski, J.; Gross, H.; Kaysser, L. (2019): Biosynthetic reconstitution of deoxysugar phosphoramidate metalloprotease inhibitors using an N-P-bond-forming kinase CHEMICAL SCIENCE,10:(16): 4486-4490.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935647
Reintjes, G.; Tegetmeyer, H.; Burgisser, M.; Orlic, S.; Tews, I.; Zubkov, M.; VoSS, D.; Zielinski, O.; Quast, C.; Glockner, F. O.; Amann, R.; Ferdelman, T. G.; Fuchs, B. M. (2019): On site analysis of bacterial communities of the ultra-oligotrophic South Pacific Gyre. Applied and environmental microbiology
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935489
Heyer, R.; Schallert, K.; Siewert, C.; Kohrs, F.; Greve, J.; Maus, I.; Klang, J.; Klocke, M.; Heiermann, M.; Hoffmann, M.; Puttker, S.; Calusinska, M.; Zoun, R.; Saake, G.; Benndorf, D.; Reichl, U. (2019): Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants. Microbiome,7:69
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2019 | Preprint | PUB-ID: 2935604
Wittler, R. (2019): Alignment- and reference-free phylogenomics with colored de-Bruijn graphs arXiv:1905.04165
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2019 | Preprint | Veröffentlicht | PUB-ID: 2935311
Frey, K.; Pucker, B. (2019): Animal, fungi, and plant genome sequences harbour different non-canonical splice sites bioRxiv
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2019 | Preprint | Veröffentlicht | PUB-ID: 2934975
Pucker, B. (2019): Mapping-based genome size estimation bioRxiv
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2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
Dörr, D.; Stoye, J. (2019): A Perspective on Comparative and Functional Genomics. In: Tandy Warnow (Hrsg.): Bioinformatics and Phylogenetics. Cham: Springer . (Computational Biology, 29). S. 361-372.
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2019 | Preprint | Veröffentlicht | PUB-ID: 2934778
Baasner, J. - S.; Howard, D.; Pucker, B. (2019): Influence of neighboring small sequence variants on functional impact prediction bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934146
Osterloff, J.; Nilssen, I.; Jarnegren, J.; van Engeland, T.; Buhl-Mortensen, P.; Nattkemper, T. W. (2019): Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory Scientific Reports
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935013
Luvizott, D. M.; Araujo, J. E.; Silva, M. D. C. P.; Dias, A. C. F.; Kraft, B.; Tegetmeyer, H.; Strous, M.; Andreote, F. D. (2019): The rates and players of denitrification, dissimilatory nitrate reduction to ammonia (DNRA) and anaerobic ammonia oxidation (anammox) in mangrove soils ANAIS DA ACADEMIA BRASILEIRA DE CIENCIAS,91:(Suppl. 1):UNSP e20180373
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
Pankoke, H.; Maus, I.; Loh, G.; Huser, A.; Seifert, J.; Tilker, A.; Hark, S.; Sczyrba, A.; Pelzer, S.; Kleinbolting, J. (2019): F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934305
Irla, M.; Heggeset, T. M. B.; Naerdal, I.; Paul, L.; Haugen, T.; Le, S. B.; Brautaset, T.; Wendisch, V. F. (2019): Corrigendum: Genome-Based Genetic Tool Development for Bacillus methanolicus. Theta- and Rolling Circle-Replicating Plasmids for Inducible Gene Expression and Application to Methanol-Based Cadaverine Production Frontiers in Microbiology,10:425
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934524
Wendisch, V. F. (2019): Metabolic engineering advances and prospects for amino acid production Metabolic Engineering
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934274
Meyer, F.; Bremges, A.; Belmann, P.; Janssen, S.; McHardy, A. C.; Koslicki, D. (2019): Assessing taxonomic metagenome profilers with OPAL. Genome biology,20:(1):51
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934613
Hain, C.; Cieslak, C.; Mentz, A.; Stranzenbach, R.; Kalinowski, J.; Stadler, R. (2019): Molekulare Diagnostik bei kutanen T-Zell Lymphomen – Identifizierung neuer potentiell therapierelevanter Biomarke JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT,17:(Suppl. 1): 1.
PUB | DOI | WoS
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932869
Naerdal, I.; Pfeifenschneider, J.; Brautaset, T.; Wendisch, V. F. (2019): Erratum: Methanol-based cadaverine production by genetically engineered Bacillus methanolicus strains Microbial Biotechnology,12:(1): 182-183.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934273
Gräwe, A.; Dreyer, A.; Vornholt, T.; Barteczko, U.; Buchholz, L.; Drews, G.; Ho, U. L.; Jackowski, M. E.; Kracht, M.; Lüders, J.; Bleckwehl, T.; Rositzka, L.; Ruwe, M.; Wittchen, M.; Lutter, P.; Müller, K.; Kalinowski, J. (2019): A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs. PloS one,14:(3):0210940
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2933685
Löwe, J.; Blifernez-Klassen, O.; Baier, T.; Wobbe, L.; Kruse, O.; Gröger, H. (2019): Type II flavoprotein monooxygenase PsFMO_A from the bacterium Pimelobacter sp. Bb-B catalyzes enantioselective Baeyer-Villiger oxidations with a relaxed cofactor specificity. Journal of biotechnology
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