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3224 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, J., Henke, C., Lin, T. W., Pätzold, W., Hassa, J., Jaenicke, S., Grosch, R., et al. (2019). Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes. Genes, 10(6), 424. doi:10.3390/genes10060424
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936087
Mudalungu, C. M., von Torne, W. J., Voigt, K., Rückert, C., Schmitz, S., Sekurova, O. N., Zotchev, S. B., et al. (2019). Noursamycins, Chlorinated Cyclohexapeptides Identified from Molecular Networking of Streptomyces noursei NTR-SR4. Journal of natural products, 82(6), 1478-1486. doi:10.1021/acs.jnatprod.8b00967
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18, 114. doi:10.1186/s12934-019-1162-5
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935517
Schultenkämper, K., Fernandes de Brito, L., Gil Lopez, M., Brautaset, T., & Wendisch, V. F. (2019). Establishment and application of CRISPR interference to affect sporulation, hydrogen peroxide detoxification and mannitol catabolism in the methylotrophic thermophile Bacillus methanolicus. Applied Microbiology and Biotechnology. doi:10.1007/s00253-019-09907-8
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936490
Seeger, B., Mentz, A., Knebel, C., Schmidt, F., Bednarz, H., Niehaus, K., Albaum, S., et al. (2019). Assessment of mixture toxicity of (tri)azoles and their hepatotoxic effects in vitro by means of omics technologies. Archives of toxicology. doi:10.1007/s00204-019-02502-w
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936329
Ismail, M., Frese, M., Patschkowski, T., Ortseifen, V., Niehaus, K., & Sewald, N. (2019). Flavin-Dependent Halogenases from Xanthomonas campestris pv. campestris B100 Prefer Bromination over Chlorination. ADVANCED SYNTHESIS & CATALYSIS, 361(11), 2475-2486. doi:10.1002/adsc.201801591
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936315
Kamal, N., Ochßner, I., Schwandner, A., Viehöver, P., Hausmann, L., Töpfer, R., Weisshaar, B., et al. (2019). Characterization of genes and alleles involved in the control of flowering time in grapevine. PLoS One, 14(7), e0214703. doi:10.1371/journal.pone.0214703
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2019 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2936458
Gil Lopez, M., Irla, M., Fernandes de Brito, L., & Wendisch, V. F. (Accepted). Characterization of D-arabitol as newly discovered carbon source of Bacillus methanolicus. Frontiers in Microbiology
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936230
Durante, L., Hübner, W., Lauersen, K. J., & Remacle, C. (2019). Characterization of the GPR1/FUN34/YaaH protein family in the green microalga Chlamydomonas suggests their role as intracellular membrane acetate channels. Plant Direct, 3(6), e00148. doi:10.1002/pld3.148
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698
Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., & Weisshaar, B. (2019). A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLOS ONE, 14(5), e0216233. doi:10.1371/journal.pone.0216233
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2019 | Bielefelder E-Dissertation | PUB-ID: 2935794
Pucker, B. (2019). De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld. doi:10.4119/unibi/2935794
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934794
Farr, M., Ferreira, S., Al-Dilaimi, A., Bogeholz, S., Goesmann, A., Kalinowski, J., Knabbe, C., et al. (2019). Fabry disease: Detection of Alu-mediated exon duplication by NGS. Molecular and cellular probes. doi:10.1016/j.mcp.2019.03.008
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936260
Arenas-Lopez, C., Locker, J., Orol, D., Walter, F., Busche, T., Kalinowski, J., Minton, N. P., et al. (2019). The genetic basis of 3-hydroxypropanoate metabolism in Cupriavidus necator H16. Biotechnology for biofuels, 12. doi:10.1186/s13068-019-1489-5
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935892
Loi, V. V., Huyen, N. T. T., Busche, T., Tung, Q. N., Gruhlke, M. C. H., Kalinowski, J., Bernhardt, J., et al. (2019). Staphylococcus aureus responds to allicin by global S-thioallylation - Role of the Brx/BSH/YpdA pathway and the disulfide reductase MerA to overcome allicin stress. Free radical biology & medicine, 139, 55-69. doi:10.1016/j.freeradbiomed.2019.05.018
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2019 | Datenpublikation | PUB-ID: 2936278
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University. doi:10.4119/unibi/2936278
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2019 | Preprint | Veröffentlicht | PUB-ID: 2936299
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Genome sequencing of Musa acuminata Dwarf Cavendish reveals a chromosome arm duplication. bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936033
Tsolis, K. C., Hamed, M. B., Simoens, K., Koepff, J., Busche, T., Rückert, C., Oldiges, M., et al. (2019). Secretome Dynamics in a Gram-Positive Bacterial Model. MOLECULAR & CELLULAR PROTEOMICS, 18(3), 423-436. doi:10.1074/mcp.RA118.000899
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936019
Huennefeld, M., Persicke, M., Kalinowski, J., & Frunzke, J. (2019). The MarR-Type Regulator MalR Is Involved in Stress-Responsive Cell Envelope Remodeling in Corynebacterium glutamicum. FRONTIERS IN MICROBIOLOGY, 10, 1039. doi:10.3389/fmicb.2019.01039
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936035
Koshla, O. T., Rokytskyy, I. V., Ostash, I. S., Busche, T., Kalinowski, J., Moesker, E., Suessmuth, R. D., et al. (2019). Secondary Metabolome and Transcriptome of Streptomyces albus J1074 in Liquid Medium SG2. CYTOLOGY AND GENETICS, 53(1), 1-7. doi:10.3103/S0095452719010080
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, P., Fischer, B., Krüger, J., Procházka, M., Rasche, H., Prinz, M., Hanussek, M., et al. (2019). de.NBI Cloud federation through ELIXIR AAI. F1000Research, 8, 842. doi:10.12688/f1000research.19013.1
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936207
Jaeger, D., Baier, T., & Lauersen, K. J. (2019). Intronserter, an advanced online tool for design of intron containing transgenes. Algal Research, 42, 101588. doi:10.1016/j.algal.2019.101588
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934570
Castellani, L. G., Nilsson, J. F., Wibberg, D., Schlüter, A., Pühler, A., Brom, S., Pistorio, M., et al. (2019). Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83. Plasmid. doi:10.1016/j.plasmid.2019.03.004
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
Pucker, B., Schilbert, H., & Schumacher, S. F. (2019). Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics. doi:10.1515/jib-2019-0005
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda, A., Feng, T., Sheehan, H., Walker‐Hale, N., Pucker, B., Lopez‐Nieves, S., Guo, R., et al. (2019). The evolution of betalain biosynthesis in Caryophyllales. New Phytologist. doi:10.1111/nph.15980
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2019 | Herausgeber Sammelwerk | Veröffentlicht | PUB-ID: 2935998
Setubal J. C., Stoye J., & Dutilh B. E. (Eds.) (2019). Computational Methods for Microbiome Analysis (Frontiers Research Topics). Lausanne: Frontiers Media.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935488
Osterloff, J., Nilssen, I., Jarnegren, J., Van Engeland, T., Buhl-Mortensen, P., & Nattkemper, T. W. (2019). Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory. Scientific reports, 9, 6578. doi:10.1038/s41598-019-41275-1
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934328
Iszatt, N., Janssen, S., Lenters, V., Dahl, C., Stigum, H., Knight, R., Mandal, S., et al. (2019). Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 month. Microbiome, 7(1), 34. doi:10.1186/s40168-019-0645-2
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J. L., Lozano, M. J., Lagares, A., Fabre, M. L., Draghi, W. O., Del Papa, M. F., Pistorio, M., et al. (2019). Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry. mBio, 10(3), e00505-19. doi:10.1128/mbio.00505-19
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935870
Haas, T., Graf, M., Niess, A., Busche, T., Kalinowski, J., Blombach, B., & Takors, R. (2019). Identifying the Growth Modulon of Corynebacterium glutamicum. FRONTIERS IN MICROBIOLOGY, 10, 974. doi:10.3389/fmicb.2019.00974
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935582
Noster, J., Persicke, M., Chao, T. - C., Krone, L., Heppner, B., Hensel, M., & Hansmeier, N. (2019). Impact of ROS-Induced Damage of TCA Cycle Enzymes on Metabolism and Virulence of Salmonella enterica serovar Typhimurium. FRONTIERS IN MICROBIOLOGY, 10, 762. doi:10.3389/fmicb.2019.00762
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935556
Verwaaijen, B., Wibberg, D., Winkler, A., Zrenner, R., Bednarz, H., Niehaus, K., Grosch, R., et al. (2019). A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani. Scientific Reports, 9, 7221. doi:10.1038/s41598-019-43706-5
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2019 | Preprint | Veröffentlicht | PUB-ID: 2935737
Pucker, B., Feng, T., & Brockington, S. F. (2019). Next generation sequencing to investigate genomic diversity in Caryophyllales. bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935580
Baulig, A., Helmle, I., Bader, M., Wolf, F., Kulik, A., Al-Dilaimi, A., Wibberg, D., et al. (2019). Biosynthetic reconstitution of deoxysugar phosphoramidate metalloprotease inhibitors using an N-P-bond-forming kinase. CHEMICAL SCIENCE, 10(16), 4486-4490. doi:10.1039/c9sc00641a
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935647
Reintjes, G., Tegetmeyer, H., Burgisser, M., Orlic, S., Tews, I., Zubkov, M., VoSS, D., et al. (2019). On site analysis of bacterial communities of the ultra-oligotrophic South Pacific Gyre. Applied and environmental microbiology. doi:10.1128/AEM.00184-19
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935489
Heyer, R., Schallert, K., Siewert, C., Kohrs, F., Greve, J., Maus, I., Klang, J., et al. (2019). Metaproteome analysis reveals that syntrophy, competition, and phage-host interaction shape microbial communities in biogas plants. Microbiome, 7, 69. doi:10.1186/s40168-019-0673-y
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2019 | Preprint | PUB-ID: 2935604
Wittler, R. (2019). Alignment- and reference-free phylogenomics with colored de-Bruijn graphs. arXiv:1905.04165
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2019 | Preprint | Veröffentlicht | PUB-ID: 2935311
Frey, K., & Pucker, B. (2019). Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. bioRxiv
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2019 | Preprint | Veröffentlicht | PUB-ID: 2934975
Pucker, B. (2019). Mapping-based genome size estimation. bioRxiv
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2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
Dörr, D., & Stoye, J. (2019). A Perspective on Comparative and Functional Genomics. In T. Warnow (Ed.), Computational Biology: Vol. 29. Bioinformatics and Phylogenetics (pp. 361-372). Cham: Springer . doi:10.1007/978-3-030-10837-3_14
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2019 | Preprint | Veröffentlicht | PUB-ID: 2934778
Baasner, J. - S., Howard, D., & Pucker, B. (2019). Influence of neighboring small sequence variants on functional impact prediction. bioRxiv
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934146
Osterloff, J., Nilssen, I., Jarnegren, J., van Engeland, T., Buhl-Mortensen, P., & Nattkemper, T. W. (2019). Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory. Scientific Reports
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935013
Luvizott, D. M., Araujo, J. E., Silva, M. D. C. P., Dias, A. C. F., Kraft, B., Tegetmeyer, H., Strous, M., et al. (2019). The rates and players of denitrification, dissimilatory nitrate reduction to ammonia (DNRA) and anaerobic ammonia oxidation (anammox) in mangrove soils. ANAIS DA ACADEMIA BRASILEIRA DE CIENCIAS, 91(Suppl. 1), UNSP e20180373. doi:10.1590/0001-3765201820180373
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
Pankoke, H., Maus, I., Loh, G., Huser, A., Seifert, J., Tilker, A., Hark, S., et al. (2019). F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters. doi:10.1093/femsle/fnz033
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934305
Irla, M., Heggeset, T. M. B., Naerdal, I., Paul, L., Haugen, T., Le, S. B., Brautaset, T., et al. (2019). Corrigendum: Genome-Based Genetic Tool Development for Bacillus methanolicus. Theta- and Rolling Circle-Replicating Plasmids for Inducible Gene Expression and Application to Methanol-Based Cadaverine Production. Frontiers in Microbiology, 10, 425. doi:10.3389/fmicb.2019.00425
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934524
Wendisch, V. F. (2019). Metabolic engineering advances and prospects for amino acid production. Metabolic Engineering. doi:10.1016/j.ymben.2019.03.008
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934274
Meyer, F., Bremges, A., Belmann, P., Janssen, S., McHardy, A. C., & Koslicki, D. (2019). Assessing taxonomic metagenome profilers with OPAL. Genome biology, 20(1), 51. doi:10.1186/s13059-019-1646-y
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934613
Hain, C., Cieslak, C., Mentz, A., Stranzenbach, R., Kalinowski, J., & Stadler, R. (2019). Molekulare Diagnostik bei kutanen T-Zell Lymphomen – Identifizierung neuer potentiell therapierelevanter Biomarke. JOURNAL DER DEUTSCHEN DERMATOLOGISCHEN GESELLSCHAFT, 17(Suppl. 1), 1. doi:10.1111/ddg.13775
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932869
Naerdal, I., Pfeifenschneider, J., Brautaset, T., & Wendisch, V. F. (2019). Erratum: Methanol-based cadaverine production by genetically engineered Bacillus methanolicus strains. Microbial Biotechnology, 12(1), 182-183. doi:10.1111/1751-7915.13352
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934273
Gräwe, A., Dreyer, A., Vornholt, T., Barteczko, U., Buchholz, L., Drews, G., Ho, U. L., et al. (2019). A paper-based, cell-free biosensor system for the detection of heavy metals and date rape drugs. PloS one, 14(3), 0210940. doi:10.1371/journal.pone.0210940
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2933685
Löwe, J., Blifernez-Klassen, O., Baier, T., Wobbe, L., Kruse, O., & Gröger, H. (2019). Type II flavoprotein monooxygenase PsFMO_A from the bacterium Pimelobacter sp. Bb-B catalyzes enantioselective Baeyer-Villiger oxidations with a relaxed cofactor specificity. Journal of biotechnology. doi:10.1016/j.jbiotec.2019.01.011
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