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3320 Publikationen

2020 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2938507
Wendisch, V. (In Press). “Genome-reduced Corynebacterium glutamicum fit for biotechnological applications” in Minimal Cells: Design, Construction, Biotechnological Applications, Lara, A. R., and Gosset Lagarda, G. eds. (Berlin: Springer ).
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937278
Sgobba, E., and Wendisch, V. F. (2020). Synthetic microbial consortia for small molecule production. Current Opinion in Biotechnology 62, 72–79.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., and Stracke, R. (2019). Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics:g3.400847.2019.
PUB | DOI | Download (ext.) | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 
2019 | Datenpublikation | PUB-ID: 2937972
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., and Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University.
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2019 | Datenpublikation | PUB-ID: 2937697
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., and Stracke, R. (2019). Genome assemblies of Musa acuminata Dwarf Cavendish. Bielefeld University.
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2019 | Datenpublikation | PUB-ID: 2936278
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., and Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937135
Pucker, B., Rückert, C., Stracke, R., Viehöver, P., Kalinowski, J., and Weisshaar, B. (2019). Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome. Genes 10:671.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938470
Wendisch, V., and Henke, N. A. (2019). Improved astaxanthin production with Corynebacterium glutamicum by application of a membrane fusion protein. Marine Drugs 17, 621.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938364
Ansorge, R., Romano, S., Sayavedra, L., Porras, M. A. G., Kupczok, A., Tegetmeyer, H., Dubilier, N., and Petersen, J. (2019). Functional diversity enables multiple symbiont strains to coexist in deep-sea mussels. Nature microbiology.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938561
Lick, S., Krockel, L., Wibberg, D., Winkler, A., Blom, J., Goesmann, A., and Kalinowski, J. (2019). Pseudomonas bubulae sp. nov., isolated from beef. International journal of systematic and evolutionary microbiology.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413
Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., Pühler, A., and Kalinowski, J. (2019). Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology 10:2448.
PUB | Dateien verfügbar | DOI | Download (ext.) | EBI - ENA Project
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938370
Ballas, P., Rückert, C., Wagener, K., Drillich, M., Kampfer, P., Busse, H. - J., and Ehling-Schulz, M. (2019). Corynebacterium endometrii sp. nov., isolated from the uterus of a cow with endometritis. International journal of systematic and evolutionary microbiology.
PUB | DOI | PubMed | Europe PMC
 
2019 | Datenpublikation | PUB-ID: 2938180
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., and Weisshaar, B. (2019). Heterozygous SNVs between BoeWGS1.0 and PN40024. Bielefeld University.
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2019 | Datenpublikation | PUB-ID: 2938178
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., and Weisshaar, B. (2019). Homozygous SNVs between BoeWGS1.0 and PN40024. Bielefeld University.
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2019 | Datenpublikation | PUB-ID: 2938185
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., and Weisshaar, B. (2019). Description and mapping positions of BoeWGS1.0 contigs. Bielefeld University.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., Schneiker-Bekel, S., Persicke, M., Pühler, A., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories 18:114.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
Pucker, B., Schilbert, H., and Schumacher, S. F. (2019). Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics.
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2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938013
Pucker, B., and Schilbert, H. (2019). “Genomics and Transcriptomics Advances in Plant Sciences” in Molecular Approaches in Plant Biology and Environmental Challenges, Singh, S. P., Upadhyay, S. K., Pandey, A., and Kumar, S. eds. Energy, Environment, and Sustainability (Singapore: Springer).
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937045
Veldmann, K., Dachwitz, S., Risse, J. M., Lee, J. - H., Sewald, N., and Wendisch, V. F. (2019). Bromination of L-tryptophan in a fermentative process with Corynebacterium glutamicum. Frontiers in Bioengineering and Biotechnology 7:219.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935517
Schultenkämper, K., Fernandes de Brito, L., Gil Lopez, M., Brautaset, T., and Wendisch, V. F. (2019). Establishment and application of CRISPR interference to affect sporulation, hydrogen peroxide detoxification and mannitol catabolism in the methylotrophic thermophile Bacillus methanolicus. Applied Microbiology and Biotechnology 103, 5879–5889.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937220
Mindt, M., Hannibal, S., Heuser, M., Risse, J. M., Sasikumar, K., Nampoothiri, K. M., and Wendisch, V. F. (2019). Fermentative production of N-alkylated glycine derivatives by recombinant Corynebacterium glutamicum using a mutant of imine reductase DpkA from Pseudomonas putida. Frontiers in Bioengineering and Biotechnology 7:232.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936783
Sheehan, H., Feng, T., Walker‐Hale, N., Lopez‐Nieves, S., Pucker, B., Guo, R., Yim, W. C., Badgami, R., Timoneda, A., Zhao, L., et al. (2019). Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales . New Phytologist.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937250
Schelletter, L., Albaum, S., Walter, S., Noll, T., and Hoffrogge, R. (2019). Clonal variations in CHO IGF signaling investigated by SILAC-based phosphoproteomics and LFQ-MS. Applied microbiology and biotechnology.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937747
Assie, A., Leisch, N., Meier, D. V., Gruber-Vodicka, H., Tegetmeyer, H., Meyerdierks, A., Kleiner, M., Hinzke, T., Joye, S., Saxton, M., et al. (2019). Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria). The ISME journal.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2937712
Rubert, D., Martinez, F. H. V., Stoye, J., and Dörr, D. (In Press). Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants. BMC Genomics.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936725
Busse, H. - J., Kleinhagauer, T., Glaeser, S. P., Spergser, J., Kampfer, P., and Rückert, C. (2019). Classification of three corynebacterial strains isolated from the Northern Bald Ibis (Geronticus eremita): proposal of Corynebacterium choanae sp. nov., Corynebacterium pseudopelargi sp. nov., and Corynebacterium gerontici sp. nov. International journal of systematic and evolutionary microbiology.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937344
Rebets, Y., Nadmid, S., Paulus, C., Dahlem, C., Herrmann, J., Huebner, H., Rückert, C., Kiemer, A. K., Gmeiner, P., Kalinowski, J., et al. (2019). Perquinolines A-C: Unprecedented Bacterial Tetrahydroisoquinolines Involving an Intriguing Biosynthesis. Angewandte Chemie International Edition 58, 12930-12934.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936726
Grenz, S., Baumann, P. T., Rückert, C., Nebel, B. A., Siebert, D., Schwentner, A., Eikmanns, B. J., Hauer, B., Kalinowski, J., Takors, R., et al. (2019). Exploiting Hydrogenophaga pseudoflava for aerobic syngas-based production of chemicals. Metabolic engineering 55, 220-230.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937242
Sorieul, L., Rückert, C., Al-Dilaimi, A., Winkler, A., Kalinowski, J., Pham, D., Wabete, N., and Boulo, V. (2019). Whole-Genome Sequence of Pseudoalteromonas sp. NC201, a Probiotic Strain for Litopenaeus stylirostris Hatcheries in New Caledonia. Microbiology resource announcements 8:e00477-19.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937247
Laso-Perez, R., Hahn, C., van Vliet, D. M., Tegetmeyer, H., Schubotz, F., Smit, N. T., Pape, T., Sahling, H., Bohrmann, G., Boetius, A., et al. (2019). Anaerobic Degradation of Non-Methane Alkanes by "Candidatus Methanoliparia" in Hydrocarbon Seeps of the Gulf of Mexico. mBio 10:e01814-19.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936458
Gil Lopez, M., Irla, M., Fernandes de Brito, L., and Wendisch, V. F. (2019). Characterization of D-arabitol as newly discovered carbon source of Bacillus methanolicus. Frontiers in Microbiology 10:1725.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936922
Graf, M., Haas, T., Mueller, F., Buchmann, A., Harm-Bekbenbetova, J., Freund, A., Niess, A., Persicke, M., Kalinowski, J., Blombach, B., et al. (2019). Continuous Adaptive Evolution of a Fast-Growing Corynebacterium glutamicum Strain Independent of Protocatechuate. Frontiers in Microbiology 10:1648.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2937148
Alanko, J., Bannai, H., Cazaux, B., Peterlongo, P., and Stoye, J. (2019). “Finding All Maximal Perfect Haplotype Blocks in Linear Time” in Proceedings of WABI 2019 Leibniz International Proceedings in Informatics. LIPIcs, vol. 143, (Dagstuhl: Schloss Dagstuhl, Leibniz-Zentrum für Informatik ), 8:1-8:9.
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936900
Wittler, R. (2019). “Alignment- and reference-free phylogenomics with colored de Bruijn graphs” in Proceedings of WABI 2019, Huber, K., and Gusfield, D. eds. LIPIcs, vol. 143, (Dagstuhl, Germany: Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik).
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936724
Fritsch, V. N., Loi, V. V., Busche, T., Sommer, A., Tedin, K., Nurnberg, D. J., Kalinowski, J., Bernhardt, J., Fulde, M., and Antelmann, H. (2019). The MarR-type repressor MhqR confers quinone and antimicrobial resistance in <i>Staphylococcus aureus</i>. Antioxidants & redox signaling.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936723
Lopatniuk, M., Myronovskyi, M., Nottebrock, A., Busche, T., Kalinowski, J., Ostash, B., Fedorenko, V., and Luzhetskyy, A. (2019). Effect of "ribosome engineering" on the transcription level and production of S. albus indigenous secondary metabolites. Applied microbiology and biotechnology 103, 7097–7110.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936907
Brandt, C., Viehweger, A., Singh, A., Pletz, M. W., Wibberg, D., Kalinowski, J., Lerch, S., Muller, B., and Makarewicz, O. (2019). Assessing genetic diversity and similarity of 435 KPC-carrying plasmids. Scientific reports 9:11223 .
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936910
Nguyen, T. V., Wibberg, D., Vigil-Stenman, T., Berckx, F., Battenberg, K., Demchenko, K. N., Blom, J., Fernandez, M. P., Yamanaka, T., Berry, A. M., et al. (2019). Frankia-enriched metagenomes from the earliest diverging symbiotic Frankia cluster: They come in teams. Genome biology and evolution 11, 2273–2291.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936721
Bednarz, H., Roloff, N., and Niehaus, K. (2019). Mass Spectrometry Imaging of the Spatial and Temporal Localization of Alkaloids in Nightshades. Journal of agricultural and food chemistry.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
López, J. L., Lozano, M. J., Lagares, A., Fabre, M. L., Draghi, W. O., Del Papa, M. F., Pistorio, M., Becker, A., Wibberg, D., Schlüter, A., et al. (2019). Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry. mBio 10:e00505-19.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935647
Reintjes, G., Tegetmeyer, H., Burgisser, M., Orlic, S., Tews, I., Zubkov, M., VoSS, D., Zielinski, O., Quast, C., Glockner, F. O., et al. (2019). On site analysis of bacterial communities of the ultra-oligotrophic South Pacific Gyre. Applied and environmental microbiology.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda, A., Feng, T., Sheehan, H., Walker‐Hale, N., Pucker, B., Lopez‐Nieves, S., Guo, R., and Brockington, S. (2019). The evolution of betalain biosynthesis in Caryophyllales. New Phytologist.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936207
Jaeger, D., Baier, T., and Lauersen, K. J. (2019). Intronserter, an advanced online tool for design of intron containing transgenes. Algal Research 42:101588.
PUB | DOI | WoS
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936223
Belmann, P., Fischer, B., Krüger, J., Procházka, M., Rasche, H., Prinz, M., Hanussek, M., Lang, M., Bartusch, F., Gläßle, B., et al. (2019). de.NBI Cloud federation through ELIXIR AAI. F1000Research 8:842.
PUB | PDF | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936839
Nelkner, J., Tejerizo, G. T., Hassa, J., Lin, T. W., Witte, J., Verwaaijen, B., Winkler, A., Bunk, B., Spröer, C., Overmann, J., et al. (2019). Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics. Genes 10:601.
PUB | PDF | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698
Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., and Weisshaar, B. (2019). A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLOS ONE 14:e0216233.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | GenBank
 
2019 | Bielefelder E-Dissertation | PUB-ID: 2935794
Pucker, B. (2019). De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
Pankoke, H., Maus, I., Loh, G., Huser, A., Seifert, J., Tilker, A., Hark, S., Sczyrba, A., Pelzer, S., and Kleinbolting, J. (2019). F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota. FEMS microbiology letters.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
Nelkner, J., Henke, C., Lin, T. W., Pätzold, W., Hassa, J., Jaenicke, S., Grosch, R., Pühler, A., Sczyrba, A., and Schlüter, A. (2019). Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes. Genes 10:424.
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2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936603
Quehenberger, J., Albersmeier, A., Glatzel, H., Hackl, M., Kalinowski, J., and Spadiut, O. (2019). A defined cultivation medium for Sulfolobus acidocaldarius. JOURNAL OF BIOTECHNOLOGY 301, 56-67.
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