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3479 Publikationen

2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2946303
Computing the rearrangement distance of natural genomes
Bohnenkämper L, Dias Vieira Braga M, Dörr D, Stoye J (Accepted)
Journal of Computational Biology.
PUB | DOI
 
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945991
Reconstructing Tumor Evolutionary Histories and Clone Trees in Polynomial-time with SubMARine
Sundermann LK, Wintersinger J, Rätsch G, Stoye J, Morris Q (2021)
PLOS Computational Biology 17(1): e1008400.
PUB | DOI | Preprint
 
2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949947
Dynamic co-cultivation process of Corynebacterium glutamicum strains for the fermentative production of riboflavin
Perez F, Burgardt A, Kallmann DR, Wendisch VF, Bar N (2021)
Fermentation 7(1): 11.
PUB | DOI
 
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961
Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress
Nilsson JF, Castellani LG, Draghi WO, Mogro EG, Wibberg D, Winkler A, Hansen LH, Schlüter A, Pühler A, Kalinowski J, Torres Tejerizo GA, et al. (2021)
FEMS Microbiology Ecology 97(1): fiaa235.
PUB | DOI | PubMed | Europe PMC
 
2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949074 PUB | DOI | Download (ext.)
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949462
High cell density cultivation enables efficient and sustainable recombinant polyamine production in the microalga Chlamydomonas reinhardtii
Freudenberg R, Baier T, Einhaus A, Wobbe L, Kruse O (2020)
Bioresource Technology 323: 124542.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948740 OA
Inorganic phosphate solubilization by rhizosphere bacterium Paenibacillus sonchi: gene expression and physiological functions
Fernandes de Brito L, Gil Lopez M, Straube L, Passaglia L, Wendisch VF (2020)
Frontiers in Microbiology 11: 588605.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945429 PUB | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949180 OA
Physiological response of Corynebacterium glutamicum to indole
Walter T, Veldmann K, Götker S, Busche T, Rückert C, Kashkooli AB, Paulus J, Cankar K, Wendisch VF (2020)
Microorganisms 8: 1945.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941820 OA
Transaldolase in Bacillus methanolicus: Biochemical Characterization and Biological Role in Ribulose Monophosphate Cycle
Pfeifenschneider J, Markert B, Stolzenberger J, Brauatset T, Wendisch VF (2020)
BMC Microbiology 20: 63.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949766
Production of 4-Hydroxybenzyl Alcohol by Metabolically Engineered Corynebacterium glutamicum
Kim B-Y, Jung H-B, Lee J-Y, Ferrer L, Purwanto HS, Lee JH (2020)
Microbiology and Biotechnology Letters 48(4): 506-514.
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948762 OA
Revisiting the Growth Modulon of Corynebacterium glutamicum Under Glucose Limited Chemostat Conditions.
Graf M, Haas T, Teleki A, Feith A, Cerff M, Wiechert W, Nöh K, Busche T, Kalinowski J, Takors R (2020)
Frontiers in Bioengineering and Biotechnology 8: 584614.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2949681
A bottom-up approach towards a bacterial consortium for the biotechnological conversion of chitin to L-lysine
Vortmann M, Stumpf AK, Sgobba E, Dierks-Hofmeister ME, Krehenbrink M, Wendisch VF, Philipp B, Moerschbacher BM (Accepted)
Applied Microbiology and Biotechnology.
PUB
 
2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2949664
Fermentative production of ʟ-2-hydroxyglutarate by engineered Corynebacterium glutamicum via pathway extension of ʟ-lysine biosynthesis
Prell C, Burgardt A, Meyer F, Wendisch VF (Accepted)
Frontiers in Bioengineering and Biotechnology.
PUB | DOI
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948756
The alarmone (p)ppGpp confers tolerance to oxidative stress during the stationary phase by maintenance of redox and iron homeostasis in Staphylococcus aureus
Fritsch VN, Loi VV, Busche T, Tung QN, Lill R, Horvatek P, Wolz C, Kalinowski J, Antelmann H (2020)
Free radical biology & medicine.
PUB | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597 OA
The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses
Maus I, Tubbesing TJ, Wibberg D, Heyer R, Hassa J, Tomazetto G, Huang L, Bunk B, Spröer C, Benndorf D, Zverlov V, et al. (2020)
Microorganisms 8(12): 2024.
PUB | PDF | DOI | PubMed | Europe PMC
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2943037
Reference-based QUantification Of gene Dispensability (QUOD)
Sielemann K, Weisshaar B, Pucker B (2020)
bioRxiv.
PUB | Download (ext.) | Preprint
 
2020 | Datenpublikation | PUB-ID: 2946079 OA
Reference-based QUantification Of gene Dispensability (QUOD) - test dataset
Sielemann K, Weisshaar B, Pucker B (2020)
Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941655 OA
A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock ‘Börner’ (Vitis riparia × Vitis cinerea) and Its Exploitation for Marker Development and Targeted Mapping
Holtgräwe D, Rosleff Soerensen T, Hausmann L, Pucker B, Viehöver P, Töpfer R, Weisshaar B (2020)
Frontiers in Plant Science 11: 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941669 OA
High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing
Siadjeu C, Pucker B, Viehöver P, Albach DC, Weisshaar B (2020)
Genes 11(3): 274.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
 
2020 | Datenpublikation | PUB-ID: 2941469 OA
Dioscorea dumetorum genome sequence v1.0
Pucker B, Siadjeu C, Viehöver P, Albach D, Weisshaar B (2020)
Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2942069 OA
Gold standard of Nd1 vs TAIR10 sequence variants
Schilbert H, Rempel A, Pucker B (2020)
Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942341 OA
Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data
Schilbert H, Rempel A, Pucker B (2020)
Plants 9(4): 439.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807
Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2
Busche M, Pucker B, Viehöver P, Weisshaar B, Stracke R (2020)
G3: Genes|Genomes|Genetics 10(1): 37-42.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
 
2020 | Datenpublikation | PUB-ID: 2941437 OA PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942459 OA
Genome Sequences of Both Organelles of the Grapevine Rootstock Cultivar ‘Börner’
Frommer B, Holtgräwe D, Hausmann L, Viehöver P, Huettel B, Töpfer R, Weisshaar B (2020)
Microbiology Resource Announcements 9(15): e01471-19.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
 
2020 | Datenpublikation | PUB-ID: 2941430 OA PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945521 OA
Microparticles globally reprogram Streptomyces albus toward accelerated morphogenesis, streamlined carbon core metabolism and enhanced production of the antituberculosis polyketide pamamycin
Kuhl M, Gläser L, Rebets Y, Rückert C, Sarkar N, Hartsch T, Kalinowski J, Luzhetskyy A, Wittmann C (2020)
Biotechnology and Bioengineering.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945474 OA
Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion
Hemmerich J, Labib M, Steffens C, Reich SJ, Weiske M, Baumgart M, Rückert C, Ruwe M, Siebert D, Wendisch VF, Kalinowski J, et al. (2020)
Microbial Biotechnology 13(6): 2020-2031.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076 OA
Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes
Sielemann K, Elbeck Z, Gärtner A, Brodehl A, Stanasiuk C, Fox H, Paluszkiewicz L, Tiesmeier J, Wlost S, Gummert J, Albaum S, et al. (2020)
Genes 11(12): 1430.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949440 OA
Application of Next Generation Sequencing (NGS) in Phage Displayed Peptide Selection to Support the Identification of Arsenic-Binding Motifs
Braun R, Schönberger N, Vinke S, Lederer F, Kalinowski J, Pollmann K (2020)
Viruses 12(12): 1360.
PUB | PDF | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946320 OA
A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110
Droste J, Kulisch M, Wolf T, Schaffert L, Schneiker-Bekel S, Pühler A, Kalinowski J (2020)
Applied microbiology and biotechnology 104: 9283–9294.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949422
Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin
Guerrero-Garzon JF, Madland E, Zehl M, Singh M, Rezaei S, Aachmann FL, Courtade G, Urban E, Rückert C, Busche T, Kalinowski J, et al. (2020)
iScience 23(12): 101785.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125 OA
Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells
Höving AL, Sielemann K, Greiner J, Kaltschmidt B, Knabbe C, Kaltschmidt C (2020)
Biology 9(12): 435.
PUB | PDF | DOI | Download (ext.) | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948721 OA
Microfluidics for Biotechnology: Bridging Gaps to Foster Microfluidic Applications
Ortseifen V, Viefhues M, Wobbe L, Grünberger A (2020)
Frontiers in Bioengineering and Biotechnology 8: 589074.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948936
Molecular pathogenesis of cutaneous lymphoma-Future directions
Stadler R, Hain C, Cieslak C, Stranzenbach R (2020)
Experimental Dermatology .
PUB | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948401 OA
ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom
Moore M, Wesemann C, Gossmann N, Sahm A, Krüger J, Sczyrba A, Dietz K-J (2020)
BMC Bioinformatics 21(1): 490.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946331
Spatial evaluation of long-term metabolic changes induced by cisplatin nephrotoxicity.
Sahin M, Neumann JM, Riefke B, Bednarz H, Gutberlet K, Giampa M, Niehaus K, Fatangare A (2020)
Toxicology letters 334: 36-43.
PUB | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949080 OA
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
Droste J, Ortseifen V, Schaffert L, Persicke M, Schneiker-Bekel S, Pühler A, Kalinowski J (2020)
BMC genomics 21: 818.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945217 OA
A framework to assess the quality and impact of bioinformatics training across ELIXIR.
Gurwitz KT, Singh Gaur P, Bellis LJ, Larcombe L, Alloza E, Balint BL, Botzki A, Dimec J, Dominguez Del Angel V, Fernandes PL, Korpelainen E, et al. (2020)
PLoS computational biology 16(7): e1007976.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2948972
Editorial: Computational Methods for Microbiome Analysis
Setubal JC, Stoye J, Dutilh BE (Accepted)
Frontiers in Genetics Research Topic: Computational Methods for Microbiome Analysis.
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941708
Turning a green alga red: engineering astaxanthin biosynthesis by intragenic pseudogene revival in Chlamydomonas reinhardtii
Perozeni F, Cazzaniga S, Baier T, Zanoni F, Zoccatelli G, Lauersen KJ, Wobbe L, Ballottari M (2020)
Plant biotechnology journal: pbi.13364.
PUB | DOI | WoS | PubMed | Europe PMC | Preprint
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2946565
The land plant‐specific MIXTA‐MYB lineage is implicated in the early evolution of the plant cuticle and the colonization of land
Xu B, Taylor L, Pucker B, Feng T, Glover BJ, Brockington SF (2020)
New Phytologist: nph.16997.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948771
The transition to flowering in winter rapeseed during vernalization
Matar S, Kumar A, Holtgräwe D, Weisshaar B, Melzer S (2020)
Plant, Cell & Environment: pce.13946.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948720 OA
RNA-Seq Time Series of Vitis vinifera Bud Development Reveals Correlation of Expression Patterns with the Local Temperature Profile
Pucker B, Schwandner A, Becker S, Hausmann L, Viehöver P, Töpfer R, Weisshaar B, Holtgräwe D (2020)
Plants 9(11): 1548.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948760
Genome sequence of Bradyrhizobium yuanmingense strain P10 130, a highly efficient nitrogen-fixing bacterium that could be used for Desmodium incanum inoculation.
Toniutti MA, Albicoro FJ, Castellani LG, Lopez Garcia SL, Fornasero LV, Zuber NE, Vera LM, Vacca C, Cafiero JH, Winkler A, Kalinowski J, et al. (2020)
Gene.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945205 OA
Microbiome Diversity and Community-Level Change Points within Manure-based small Biogas Plants
Theuerl S, Klang J, Hülsemann B, Mächtig T, Hassa J (2020)
Microorganisms 8(8).
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946440 OA PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944597 OA PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | Preprint
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946157 OA
pSETT4, an Improved φC31-Based Integrative Vector System for Actinoplanes sp. SE50/110
Schaffert L, Jacob L, Schneiker-Bekel S, Persicke M, März C, Rückert C, Pühler A, Kalinowski J (2020)
Microbiology Resource Announcements 9(39): e00596-20.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 

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