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3352 Publikationen

2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311 OA
Frey, Katharina, and Pucker, Boas. 2020. “Animal, fungi, and plant genome sequences harbour different non-canonical splice sites”. Cells 9 (2): 458.
PUB | PDF | DOI | Download (ext.) | bioRxiv
 
2020 | Datenpublikation | PUB-ID: 2941469 OA
Pucker, Boas, Siadjeu, Christian, Viehöver, Prisca, Albach, Dirk, and Weisshaar, Bernd. 2020. Dioscorea dumetorum genome sequence v1.0. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2940688 OA
Siadjeu, Christian, Pucker, Boas, Viehöver, Prisca, Albach, Dirk, and Weisshaar, Bernd. 2020. “High contiguity de novo genome sequence assembly of Trifoliate yam (Dioscorea dumetorum) using long read sequencing”. bioRxiv.
PUB | Download (ext.) | bioRxiv
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934524
Wendisch, Volker F. 2020. “Metabolic engineering advances and prospects for amino acid production”. Metabolic Engineering 58: 17–34.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2941202
Schultenkämper, Kerstin, Fernandes de Brito, Luciana, and Wendisch, Volker F. 2020. “Impact of CRISPR interference on strain development in biotechnology”. Biotechnol Appl Biochem.
PUB | DOI | PubMed | Europe PMC
 
2020 | Datenpublikation | PUB-ID: 2941430 OA
Frommer, Bianca, Holtgräwe, Daniela, and Weisshaar, Bernd. 2020. Dataset describing RNA editing sites in the chloroplast genome of 'Boerner' (Vitis riparia x Vitis cinerea). Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941437 OA
Frommer, Bianca, Holtgräwe, Daniela, and Weisshaar, Bernd. 2020. Dataset describing RNA editing sites in the mitochondrial genome of 'Boerner' (Vitis riparia x Vitis cinerea). Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939840 OA
Hassa, Julia, Wibberg, Daniel, Maus, Irena, Pühler, Alfred, and Schlüter, Andreas. 2020. “Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter”. Microorganisms 8 (1): 13.
PUB | PDF | DOI | PubMed | Europe PMC
 
2020 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2938976
Wendisch, Volker F., and Lee, Jin-Ho. In Press. “Metabolic engineering in Corynebacterium glutamicum”. In Corynebacterium glutamicum – Biology and Biotechnology, ed. Masayuki Inui and Koichi Toyoda. Microbiology Monographs. Springer Nature Switzerland.
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939618 OA
Alanko, Jarno, Bannai, Hideo, Cazaux, Bastien, Peterlongo, Pierre, and Stoye, Jens. 2020. “Finding all maximal perfect haplotype blocks in linear time”. Algorithms for Molecular Biology 15: 2.
PUB | PDF
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941091
Li, Qinyuan, Rückert, Christian, Li, Guiding, Huang, Ping, Schneider, Olha, Kalinowski, Jorn, Jiang, Yi, B Zotchev, Sergey, and Jiang, Cheng-Lin. 2020. “Corrigendum: Prauserella flavalba sp. nov., a novel species of the genus Prauserella, isolated from alkaline soil.”. International journal of systematic and evolutionary microbiology 70 (1): 703.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941169
Mao, Yanbo, Gabel, Alexander, Nakel, Thomas, Viehöver, Prisca, Baum, Thomas, Tekleyohans, Dawit Girma, Vo, Dieu, Grosse, Ivo, and Groß-Hardt, Rita. 2020. “Selective egg cell polyspermy bypasses the triploid block”. eLife 9: e52976.
PUB | DOI | PubMed | Europe PMC | EBI - ENA Project
 
2020 | Konferenzbeitrag | Angenommen | PUB-ID: 2939729
Bohnenkämper, Leonard, Dias Vieira Braga, Marília, Dörr, Daniel, and Stoye, Jens. Accepted. “Computing the rearrangement distance of natural genomes”. In Proceedings of RECOMB 2020. LNBI.
PUB
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2939861
Bohnenkämper, Leonard, Dias Vieira Braga, Marília, Dörr, Daniel, and Stoye, Jens. 2020. “Computing the rearrangement distance of natural genomes”. arXiv:2001.02139.
PUB | arXiv
 
2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2939598
Sevillya, Gur, Dörr, Daniel, Lerner, Yael, Stoye, Jens, Steel, Mike, and Snir, Sagi. Accepted. “Horizontal Gene Transfer Phylogenetics: A Random Walk Approach”. Molecular Biology and Evolution.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2940387
Fernando Gil, Jose, Wibberg, Daniel, Eini, Omid, Savenkov, Eugene I, Varrelmann, Mark, and Liebe, Sebastian. 2020. “Comparative Transcriptome Analysis Provides Molecular Insights into the Interaction of Beet necrotic yellow vein virus and Beet soil-borne mosaic virus with Their Host Sugar Beet.”. Viruses 12 (1): 76.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2940386
Lick, Sonja, Krockel, Lothar, Wibberg, Daniel, Winkler, Annika, Blom, Jochen, Bantleon, Annegret, Goesmann, Alexander, and Kalinowski, Jörn. 2020. “Pseudomonas carnis sp. nov., isolated from meat.”. International journal of systematic and evolutionary microbiology.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939461
Drejer, Eivind B., Chan, Dennis, Haupka, Carsten, Wendisch, Volker F., Brautaset, Trygve, and Irla, Marta. 2020. “Methanol-based acetoin production by genetically engineered Bacillus methanolicus”. Green Chemistry 20: 788-802.
PUB | DOI
 
2020 | Datenpublikation | PUB-ID: 2941041 OA
Pucker, Boas, Feng, Tao, and Brockington, Samuel. 2020. Next generation sequencing to investigate genomic diversity in Caryophyllales - Kewa caespitosa. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941045 OA
Pucker, Boas, Feng, Tao, and Brockington, Samuel. 2020. Next generation sequencing to investigate genomic diversity in Caryophyllales - Pharnaceum exiguum. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941043 OA
Pucker, Boas, Feng, Tao, and Brockington, Samuel. 2020. Next generation sequencing to investigate genomic diversity in Caryophyllales - Macarthuria australis. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941047 OA
Pucker, Boas. 2020. Arabidopsis thaliana Nd-1 Illumina short reads. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2940694 OA
Pucker, Boas, Pandey, Ashutosh, Weisshaar, Bernd, and Stracke, Ralf. 2020. “The R2R3-MYB gene family in banana (Musa acuminata): genome-wide identification, classification and expression patterns”. bioRxiv.
PUB | Download (ext.) | bioRxiv
 
2020 | Preprint | PUB-ID: 2940602
Haghshenas, Ehsan, Asghari, Hossein, Stoye, Jens, Chauve, Cedric, and Hach, Faraz. 2020. “HASLR: Fast Hybrid Assembly of Long Reads”.
PUB | bioRxiv
 
2020 | Zeitschriftenaufsatz | PUB-ID: 2940492
Epping, Miriam Sophie, Wedde, Severin, Grundmann, Armin, Radukic, Marco, Gröger, Harald, Hummel, Anke, and Viefhues, Martina. 2020. “Dielectrophoretic analysis of the impact of isopropyl alcohol on the electric polarisability of Escherichia coli whole-cells”. Analytical Bioanalytical Chemistry.
PUB | DOI
 
2020 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938507
Wendisch, Volker F. 2020. “Genome-reduced Corynebacterium glutamicum fit for biotechnological applications”. In Minimal Cells: Design, Construction, Biotechnological Applications, ed. Alvaro R. Lara and Guillermo Gosset Lagarda, 95-116. Cham: Springer .
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937278
Sgobba, Elvira, and Wendisch, Volker F. 2020. “Synthetic microbial consortia for small molecule production”. Current Opinion in Biotechnology 62: 72–79.
PUB | DOI | PubMed | Europe PMC
 
2019 | Datenpublikation | PUB-ID: 2934220 OA
Pucker, Boas, and Frey, Katharina. 2019. RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2019 | Datenpublikation | PUB-ID: 2934226 OA
Pucker, Boas, and Frey, Katharina. 2019. RNA-Seq read coverage depth of splice sites in animals. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698 OA
Pucker, Boas, Holtgräwe, Daniela, Stadermann, Kai Bernd, Frey, Katharina, Huettel, Bruno, Reinhardt, Richard, and Weisshaar, Bernd. 2019. “A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set”. PLOS ONE 14 (5): e0216233.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv | GenBank
 
2019 | Bielefelder E-Dissertation | PUB-ID: 2935794 OA
Pucker, Boas. 2019. De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld.
PUB | PDF | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936230
Durante, Lorenzo, Hübner, Wolfgang, Lauersen, Kyle J., and Remacle, Claire. 2019. “Characterization of the GPR1/FUN34/YaaH protein family in the green microalga Chlamydomonas suggests their role as intracellular membrane acetate channels”. Plant Direct 3 (6): e00148.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941092
Liebe, Sebastian, Wibberg, Daniel, Maiss, Edgar, and Varrelmann, Mark. 2019. “Application of a Reverse Genetic System for Beet Necrotic Yellow Vein Virus to Study Rz1 Resistance Response in Sugar Beet.”. Frontiers in plant science 10.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda, Alfonso, Feng, Tao, Sheehan, Hester, Walker‐Hale, Nathanael, Pucker, Boas, Lopez‐Nieves, Samuel, Guo, Rui, and Brockington, Samuel. 2019. “The evolution of betalain biosynthesis in Caryophyllales”. New Phytologist 224 (1): 71-85.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938013
Pucker, Boas, and Schilbert, Hanna. 2019. “Genomics and Transcriptomics Advance in Plant Sciences”. In Molecular Approaches in Plant Biology and Environmental Challenges, ed. Sudhir P. Singh, Santosh Kumar Upadhyay, Ashutosh Pandey, and Sunil Kumar. Energy, Environment, and Sustainability. Singapore: Springer.
PUB | DOI
 
2019 | Konferenzbeitrag | PUB-ID: 2940489
S. Epping, Miriam, Grundmann, Armin, Gröger, Harald, and Viefhues, Martina. 2019. “Dielectrophoretic analysis: a tool for studying the impact of organic solvents on whole-cell biocatalysts”. In 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS2019), 1014-1015.
PUB
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939579
Noster, Janina, Hansmeier, Nicole, Persicke, Marcus, Chao, Tzu-Chiao, Kurre, Rainer, Popp, Jasmin, Liss, Viktoria, Reuter, Tatjana, and Hensel, Michael. 2019. “Blocks in Tricarboxylic Acid Cycle of Salmonella enterica Cause Global Perturbation of Carbon Storage, Motility, and Host-Pathogen Interaction.”. mSphere 4 (6).
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Datenpublikation | PUB-ID: 2937972 OA
Pucker, Boas, Busche, Mareike, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. 2019. Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2019 | Datenpublikation | PUB-ID: 2937697 OA
Pucker, Boas, Busche, Mareike, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. 2019. Genome assemblies of Musa acuminata Dwarf Cavendish. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807 OA
Busche, Mareike, Pucker, Boas, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. 2019. “Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2”. G3: Genes|Genomes|Genetics: g3.400847.2019.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2939887
Campanaro, Stefano, Treu, Laura, Rodriguez-R, Luis M, Kovalovszki, Adam, Ziels, Ryan M, Maus, Irena, Zhu, Xinyu, et al. 2019. “The anaerobic digestion microbiome: a collection of 1600 metagenome-assembled genomes shows high species diversity related to methane production”. bioRxiv.
PUB | Download (ext.) | bioRxiv
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908574
Luhmann, Nina, Lafond, Manuel, Thévenin, Annelyse, Ouangraoua, Aida, Wittler, Roland, and Chauve, Cedric. 2019. “The SCJ Small Parsimony Problem for Weighted Gene Adjacencies”. IEEE/ACM Transactions on Computational Biology and Bioinformatics 16 (4).
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936783
Sheehan, Hester, Feng, Tao, Walker‐Hale, Nathanael, Lopez‐Nieves, Samuel, Pucker, Boas, Guo, Rui, Yim, Won C., et al. 2019. “Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales ”. New Phytologist.
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844 OA
Pucker, Boas, Schilbert, Hanna, and Schumacher, Sina Franziska. 2019. “Integrating Molecular Biology and Bioinformatics Education”. Journal of Integrative Bioinformatics.
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2935737 OA
Pucker, Boas, Feng, Tao, and Brockington, Samuel F. 2019. “Next generation sequencing to investigate genomic diversity in Caryophyllales”. bioRxiv.
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2934975 OA
Pucker, Boas. 2019. “Mapping-based genome size estimation”. bioRxiv.
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2934778 OA
Baasner, Jan-Simon, Howard, Dakota, and Pucker, Boas. 2019. “Influence of neighboring small sequence variants on functional impact prediction”. bioRxiv.
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Datenpublikation | PUB-ID: 2936278 OA
Pucker, Boas, Busche, Mareike, Viehöver, Prisca, Weisshaar, Bernd, and Stracke, Ralf. 2019. Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University.
PUB | Dateien verfügbar | DOI
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2939244 OA
Holtgräwe, Daniela, Hausmann, Ludger, Rosleff Soerensen, Thomas, Pucker, Boas, Viehöver, Prisca, Töpfer, Reinhard, and Weisshaar, Bernd. 2019. “A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock 'Börner' (Vitis riparia x Vitis cinerea) and its Exploitation for Marker Development and Targeted Mapping”. bioRxiv.
PUB | Download (ext.) | bioRxiv
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937135 OA
Pucker, Boas, Rückert, Christian, Stracke, Ralf, Viehöver, Prisca, Kalinowski, Jörn, and Weisshaar, Bernd. 2019. “Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome”. Genes 10 (9): 671.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 

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