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3319 Publikationen
2020 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2938976
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Wendisch, V., & Lee, J. - H. (In Press). Metabolic engineering in Corynebacterium glutamicum. In M. Inui & K. Toyoda (Eds.), Microbiology Monographs. Corynebacterium glutamicum – Biology and Biotechnology Springer Nature Switzerland.
2020 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2938507
PUB | DOI
Wendisch, V. (In Press). Genome-reduced Corynebacterium glutamicum fit for biotechnological applications. In A. R. Lara & G. Gosset Lagarda (Eds.), Minimal Cells: Design, Construction, Biotechnological Applications Berlin: Springer . doi:10.1007/978-3-030-31897-0_4
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937278
PUB | DOI | PubMed | Europe PMC
Sgobba, E., & Wendisch, V. F. (2020). Synthetic microbial consortia for small molecule production. Current Opinion in Biotechnology, 62, 72–79. doi:10.1016/j.copbio.2019.09.011
2019 | Bielefelder E-Dissertation | PUB-ID: 2935794 
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| PDF | DOI
Pucker, B. (2019). De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld. doi:10.4119/unibi/2935794
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934274
PUB | DOI | WoS | PubMed | Europe PMC | bioRxiv
Meyer, F., Bremges, A., Belmann, P., Janssen, S., McHardy, A. C., & Koslicki, D. (2019). Assessing taxonomic metagenome profilers with OPAL. Genome biology, 20(1), 51. doi:10.1186/s13059-019-1646-y
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937747
PUB | DOI | PubMed | Europe PMC | bioRxiv
Assie, A., Leisch, N., Meier, D. V., Gruber-Vodicka, H., Tegetmeyer, H., Meyerdierks, A., Kleiner, M., et al. (2019). Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria). The ISME journal. doi:10.1038/s41396-019-0508-7
2019 | Preprint | Veröffentlicht | PUB-ID: 2933775
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Perozeni, F., Cazzaniga, S., Baier, T., Zanoni, F., Zoccatelli, G., Lauersen, K. J., Wobbe, L., et al. (2019). Turning a green alga red. Engineering astaxanthin biosynthesis by intragenic pseudogene revival in Chlamydomonas reinhardtii.: Supplementary information. bioRxiv
2019 | Preprint | Veröffentlicht | PUB-ID: 2934778
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| PDF | Download (ext.) | bioRxiv
Baasner, J. - S., Howard, D., & Pucker, B. (2019). Influence of neighboring small sequence variants on functional impact prediction. bioRxiv
2019 | Preprint | Veröffentlicht | PUB-ID: 2934975
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| PDF | Download (ext.) | bioRxiv
Pucker, B. (2019). Mapping-based genome size estimation. bioRxiv
2019 | Preprint | Veröffentlicht | PUB-ID: 2935311
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| PDF | Download (ext.) | bioRxiv
Frey, K., & Pucker, B. (2019). Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. bioRxiv
2019 | Preprint | Veröffentlicht | PUB-ID: 2935737
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| PDF | Download (ext.) | bioRxiv
Pucker, B., Feng, T., & Brockington, S. F. (2019). Next generation sequencing to investigate genomic diversity in Caryophyllales. bioRxiv
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698
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| PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv
| GenBank
Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., & Weisshaar, B. (2019). A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLOS ONE, 14(5), e0216233. doi:10.1371/journal.pone.0216233
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936315
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| PDF | DOI | Download (ext.) | PubMed | Europe PMC | bioRxiv
| NCBI BioProject
Kamal, N., Ochßner, I., Schwandner, A., Viehöver, P., Hausmann, L., Töpfer, R., Weisshaar, B., et al. (2019). Characterization of genes and alleles involved in the control of flowering time in grapevine. PLoS One, 14(7), e0214703. doi:10.1371/journal.pone.0214703
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938470
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| PDF | DOI | PubMed | Europe PMC
Wendisch, V., & Henke, N. A. (2019). Improved astaxanthin production with Corynebacterium glutamicum by application of a membrane fusion protein. Marine Drugs, 17, 621. doi:10.3390/md17110621
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807
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| EBI - ENA Project
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics, g3.400847.2019. doi:10.1534/g3.119.400847
2019 | Datenpublikation | PUB-ID: 2937972
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| Dateien verfügbar | DOI
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University. doi:10.4119/unibi/2937972
2019 | Datenpublikation | PUB-ID: 2937697
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| Dateien verfügbar | DOI
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Genome assemblies of Musa acuminata Dwarf Cavendish. Bielefeld University. doi:10.4119/unibi/2937697
2019 | Datenpublikation | PUB-ID: 2936278
PUB
| Dateien verfügbar | DOI
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University. doi:10.4119/unibi/2936278
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937135
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| PDF | DOI | WoS | PubMed | Europe PMC | bioRxiv
| EBI - ENA Project
Pucker, B., Rückert, C., Stracke, R., Viehöver, P., Kalinowski, J., & Weisshaar, B. (2019). Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome. Genes, 10(9), 671. doi:10.3390/genes10090671
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938364
PUB | DOI | PubMed | Europe PMC
Ansorge, R., Romano, S., Sayavedra, L., Porras, M. A. G., Kupczok, A., Tegetmeyer, H., Dubilier, N., et al. (2019). Functional diversity enables multiple symbiont strains to coexist in deep-sea mussels. Nature microbiology. doi:10.1038/s41564-019-0572-9
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2938561
PUB | DOI | PubMed | Europe PMC
Lick, S., Krockel, L., Wibberg, D., Winkler, A., Blom, J., Goesmann, A., & Kalinowski, J. (2019). Pseudomonas bubulae sp. nov., isolated from beef. International journal of systematic and evolutionary microbiology. doi:10.1099/ijsem.0.003751
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938413
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| Dateien verfügbar | DOI | Download (ext.)
| EBI - ENA Project
Schaffert, L., Schneiker-Bekel, S., Dymek, S., Droste, J., Persicke, M., Busche, T., Brandt, D., et al. (2019). Essentiality of the Maltase AmlE in Maltose Utilization and Its Transcriptional Regulation by the Repressor AmlR in the Acarbose-Producing Bacterium Actinoplanes sp. SE50/110. Frontiers in Microbiology, 10, 2448. doi:10.3389/fmicb.2019.02448
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938370
PUB | DOI | PubMed | Europe PMC
Ballas, P., Rückert, C., Wagener, K., Drillich, M., Kampfer, P., Busse, H. - J., & Ehling-Schulz, M. (2019). Corynebacterium endometrii sp. nov., isolated from the uterus of a cow with endometritis. International journal of systematic and evolutionary microbiology. doi:10.1099/ijsem.0.003728
2019 | Datenpublikation | PUB-ID: 2938180
PUB
| Dateien verfügbar | DOI
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., & Weisshaar, B. (2019). Heterozygous SNVs between BoeWGS1.0 and PN40024. Bielefeld University. doi:10.4119/unibi/2938180
2019 | Datenpublikation | PUB-ID: 2938178
PUB
| Dateien verfügbar | DOI
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., & Weisshaar, B. (2019). Homozygous SNVs between BoeWGS1.0 and PN40024. Bielefeld University. doi:10.4119/unibi/2938178
2019 | Datenpublikation | PUB-ID: 2938185
PUB
| Dateien verfügbar | DOI
Holtgräwe, D., Pucker, B., Rosleff Sörensen, T., & Weisshaar, B. (2019). Description and mapping positions of BoeWGS1.0 contigs. Bielefeld University. doi:10.4119/unibi/2938185
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936439
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| Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
Schaffert, L., März, C., Burkhardt, L., Droste, J., Brandt, D., Busche, T., Rosen, W., et al. (2019). Evaluation of vector systems and promoters for overexpression of the acarbose biosynthesis gene acbC in Actinoplanes sp. SE50/110. Microbial Cell Factories, 18, 114. doi:10.1186/s12934-019-1162-5
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844
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Pucker, B., Schilbert, H., & Schumacher, S. F. (2019). Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics. doi:10.1515/jib-2019-0005
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938013
PUB | DOI
Pucker, B., & Schilbert, H. (2019). Genomics and Transcriptomics Advances in Plant Sciences. In S. P. Singh, S. K. Upadhyay, A. Pandey, & S. Kumar (Eds.), Energy, Environment, and Sustainability. Molecular Approaches in Plant Biology and Environmental Challenges Singapore: Springer. doi:10.1007/978-981-15-0690-1_19
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937045
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| PDF | DOI | WoS | PubMed | Europe PMC
Veldmann, K., Dachwitz, S., Risse, J. M., Lee, J. - H., Sewald, N., & Wendisch, V. F. (2019). Bromination of L-tryptophan in a fermentative process with Corynebacterium glutamicum. Frontiers in Bioengineering and Biotechnology , 7, 219. doi:10.3389/fbioe.2019.00219
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935517
PUB | DOI | WoS | PubMed | Europe PMC
Schultenkämper, K., Fernandes de Brito, L., Gil Lopez, M., Brautaset, T., & Wendisch, V. F. (2019). Establishment and application of CRISPR interference to affect sporulation, hydrogen peroxide detoxification and mannitol catabolism in the methylotrophic thermophile Bacillus methanolicus. Applied Microbiology and Biotechnology, 103, 5879–5889. doi:10.1007/s00253-019-09907-8
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937220
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Mindt, M., Hannibal, S., Heuser, M., Risse, J. M., Sasikumar, K., Nampoothiri, K. M., & Wendisch, V. F. (2019). Fermentative production of N-alkylated glycine derivatives by recombinant Corynebacterium glutamicum using a mutant of imine reductase DpkA from Pseudomonas putida. Frontiers in Bioengineering and Biotechnology, 7, 232. doi:10.3389/fbioe.2019.00232
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936783
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Sheehan, H., Feng, T., Walker‐Hale, N., Lopez‐Nieves, S., Pucker, B., Guo, R., Yim, W. C., et al. (2019). Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales . New Phytologist. doi:10.1111/nph.16089
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2937250
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Schelletter, L., Albaum, S., Walter, S., Noll, T., & Hoffrogge, R. (2019). Clonal variations in CHO IGF signaling investigated by SILAC-based phosphoproteomics and LFQ-MS. Applied microbiology and biotechnology. doi:10.1007/s00253-019-10020-z
2019 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2937712
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Rubert, D., Martinez, F. H. V., Stoye, J., & Dörr, D. (In Press). Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants. BMC Genomics
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936725
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Busse, H. - J., Kleinhagauer, T., Glaeser, S. P., Spergser, J., Kampfer, P., & Rückert, C. (2019). Classification of three corynebacterial strains isolated from the Northern Bald Ibis (Geronticus eremita): proposal of Corynebacterium choanae sp. nov., Corynebacterium pseudopelargi sp. nov., and Corynebacterium gerontici sp. nov. International journal of systematic and evolutionary microbiology. doi:10.1099/ijsem.0.003580
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937344
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Rebets, Y., Nadmid, S., Paulus, C., Dahlem, C., Herrmann, J., Huebner, H., Rückert, C., et al. (2019). Perquinolines A-C: Unprecedented Bacterial Tetrahydroisoquinolines Involving an Intriguing Biosynthesis. Angewandte Chemie International Edition, 58(37), 12930-12934. doi:10.1002/anie.201905538
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936726
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Grenz, S., Baumann, P. T., Rückert, C., Nebel, B. A., Siebert, D., Schwentner, A., Eikmanns, B. J., et al. (2019). Exploiting Hydrogenophaga pseudoflava for aerobic syngas-based production of chemicals. Metabolic engineering, 55, 220-230. doi:10.1016/j.ymben.2019.07.006
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937242
PUB | DOI | PubMed | Europe PMC
Sorieul, L., Rückert, C., Al-Dilaimi, A., Winkler, A., Kalinowski, J., Pham, D., Wabete, N., et al. (2019). Whole-Genome Sequence of Pseudoalteromonas sp. NC201, a Probiotic Strain for Litopenaeus stylirostris Hatcheries in New Caledonia. Microbiology resource announcements, 8(34), e00477-19. doi:10.1128/MRA.00477-19
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937247
PUB | DOI | PubMed | Europe PMC
Laso-Perez, R., Hahn, C., van Vliet, D. M., Tegetmeyer, H., Schubotz, F., Smit, N. T., Pape, T., et al. (2019). Anaerobic Degradation of Non-Methane Alkanes by "Candidatus Methanoliparia" in Hydrocarbon Seeps of the Gulf of Mexico. mBio, 10(4), e01814-19. doi:10.1128/mBio.01814-19
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936458
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Gil Lopez, M., Irla, M., Fernandes de Brito, L., & Wendisch, V. F. (2019). Characterization of D-arabitol as newly discovered carbon source of Bacillus methanolicus. Frontiers in Microbiology, 10, 1725. doi:10.3389/fmicb.2019.01725
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936922
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Graf, M., Haas, T., Mueller, F., Buchmann, A., Harm-Bekbenbetova, J., Freund, A., Niess, A., et al. (2019). Continuous Adaptive Evolution of a Fast-Growing Corynebacterium glutamicum Strain Independent of Protocatechuate. Frontiers in Microbiology , 10, 1648. doi:10.3389/fmicb.2019.01648
2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2937148
PUB | DOI
Alanko, J., Bannai, H., Cazaux, B., Peterlongo, P., & Stoye, J. (2019). Finding All Maximal Perfect Haplotype Blocks in Linear Time. Proceedings of WABI 2019, Leibniz International Proceedings in Informatics. LIPIcs, 143, 8:1-8:9. Dagstuhl: Schloss Dagstuhl, Leibniz-Zentrum für Informatik . doi:10.4230/LIPICS.WABI.2019.8
2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936900
PUB | DOI | Download (ext.)
Wittler, R. (2019). Alignment- and reference-free phylogenomics with colored de Bruijn graphs. In K. Huber & D. Gusfield (Eds.), LIPIcs: Vol. 143. Proceedings of WABI 2019 Dagstuhl, Germany: Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik. doi:10.4230/LIPIcs.WABI.2019.2
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936724
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Fritsch, V. N., Loi, V. V., Busche, T., Sommer, A., Tedin, K., Nurnberg, D. J., Kalinowski, J., et al. (2019). The MarR-type repressor MhqR confers quinone and antimicrobial resistance in <i>Staphylococcus aureus</i>. Antioxidants & redox signaling. doi:10.1089/ars.2019.7750
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936723
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Lopatniuk, M., Myronovskyi, M., Nottebrock, A., Busche, T., Kalinowski, J., Ostash, B., Fedorenko, V., et al. (2019). Effect of "ribosome engineering" on the transcription level and production of S. albus indigenous secondary metabolites. Applied microbiology and biotechnology, 103(17), 7097–7110. doi:10.1007/s00253-019-10005-y
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936907
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Brandt, C., Viehweger, A., Singh, A., Pletz, M. W., Wibberg, D., Kalinowski, J., Lerch, S., et al. (2019). Assessing genetic diversity and similarity of 435 KPC-carrying plasmids. Scientific reports, 9(1), 11223 . doi:10.1038/s41598-019-47758-5
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936910
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Nguyen, T. V., Wibberg, D., Vigil-Stenman, T., Berckx, F., Battenberg, K., Demchenko, K. N., Blom, J., et al. (2019). Frankia-enriched metagenomes from the earliest diverging symbiotic Frankia cluster: They come in teams. Genome biology and evolution, 11(8), 2273–2291. doi:10.1093/gbe/evz153
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936721
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Bednarz, H., Roloff, N., & Niehaus, K. (2019). Mass Spectrometry Imaging of the Spatial and Temporal Localization of Alkaloids in Nightshades. Journal of agricultural and food chemistry. doi:10.1021/acs.jafc.9b01155
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935899
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López, J. L., Lozano, M. J., Lagares, A., Fabre, M. L., Draghi, W. O., Del Papa, M. F., Pistorio, M., et al. (2019). Codon Usage Heterogeneity in the Multipartite Prokaryote Genome. Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry. mBio, 10(3), e00505-19. doi:10.1128/mbio.00505-19