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3352 Publikationen

2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935311 OA
Frey, K., & Pucker, B. (2020). Animal, fungi, and plant genome sequences harbour different non-canonical splice sites. Cells, 9(2), 458. doi:10.3390/cells9020458
PUB | PDF | DOI | Download (ext.) | bioRxiv
 
2020 | Datenpublikation | PUB-ID: 2941469 OA
Pucker, B., Siadjeu, C., Viehöver, P., Albach, D., & Weisshaar, B. (2020). Dioscorea dumetorum genome sequence v1.0. Bielefeld University. doi:10.4119/unibi/2941469
PUB | Dateien verfügbar | DOI
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2940688 OA
Siadjeu, C., Pucker, B., Viehöver, P., Albach, D., & Weisshaar, B. (2020). High contiguity de novo genome sequence assembly of Trifoliate yam (Dioscorea dumetorum) using long read sequencing. bioRxiv
PUB | Download (ext.) | bioRxiv
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2934524
Wendisch, V. F. (2020). Metabolic engineering advances and prospects for amino acid production. Metabolic Engineering, 58, 17–34. doi:10.1016/j.ymben.2019.03.008
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2941202
Schultenkämper, K., Fernandes de Brito, L., & Wendisch, V. F. (2020). Impact of CRISPR interference on strain development in biotechnology. Biotechnol Appl Biochem. doi:10.1002/bab.1901
PUB | DOI | PubMed | Europe PMC
 
2020 | Datenpublikation | PUB-ID: 2941430 OA
Frommer, B., Holtgräwe, D., & Weisshaar, B. (2020). Dataset describing RNA editing sites in the chloroplast genome of 'Boerner' (Vitis riparia x Vitis cinerea). Bielefeld University. doi:10.4119/unibi/2941430
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941437 OA
Frommer, B., Holtgräwe, D., & Weisshaar, B. (2020). Dataset describing RNA editing sites in the mitochondrial genome of 'Boerner' (Vitis riparia x Vitis cinerea). Bielefeld University. doi:10.4119/unibi/2941437
PUB | Dateien verfügbar | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939840 OA
Hassa, J., Wibberg, D., Maus, I., Pühler, A., & Schlüter, A. (2020). Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter. Microorganisms, 8(1), 13. doi:10.3390/microorganisms8010013
PUB | PDF | DOI | PubMed | Europe PMC
 
2020 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2938976
Wendisch, V. F., & Lee, J. - H. (In Press). Metabolic engineering in Corynebacterium glutamicum. In M. Inui & K. Toyoda (Eds.), Microbiology Monographs. Corynebacterium glutamicum – Biology and Biotechnology Springer Nature Switzerland. doi:10.1007/978-3-030-39267-3_10
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939618 OA
Alanko, J., Bannai, H., Cazaux, B., Peterlongo, P., & Stoye, J. (2020). Finding all maximal perfect haplotype blocks in linear time. Algorithms for Molecular Biology, 15, 2
PUB | PDF
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941091
Li, Q., Rückert, C., Li, G., Huang, P., Schneider, O., Kalinowski, J., Jiang, Y., et al. (2020). Corrigendum: Prauserella flavalba sp. nov., a novel species of the genus Prauserella, isolated from alkaline soil. International journal of systematic and evolutionary microbiology, 70(1), 703. doi:10.1099/ijsem.0.003886
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941169
Mao, Y., Gabel, A., Nakel, T., Viehöver, P., Baum, T., Tekleyohans, D. G., Vo, D., et al. (2020). Selective egg cell polyspermy bypasses the triploid block. eLife, 9, e52976. doi:10.7554/elife.52976
PUB | DOI | PubMed | Europe PMC | EBI - ENA Project
 
2020 | Konferenzbeitrag | Angenommen | PUB-ID: 2939729
Bohnenkämper, L., Dias Vieira Braga, M., Dörr, D., & Stoye, J. (Accepted). Computing the rearrangement distance of natural genomes. Proceedings of RECOMB 2020, LNBI
PUB
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2939861
Bohnenkämper, L., Dias Vieira Braga, M., Dörr, D., & Stoye, J. (2020). Computing the rearrangement distance of natural genomes. arXiv:2001.02139
PUB | arXiv
 
2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2939598
Sevillya, G., Dörr, D., Lerner, Y., Stoye, J., Steel, M., & Snir, S. (Accepted). Horizontal Gene Transfer Phylogenetics: A Random Walk Approach. Molecular Biology and Evolution. doi:10.1093/molbev/msz302
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2940387
Fernando Gil, J., Wibberg, D., Eini, O., Savenkov, E. I., Varrelmann, M., & Liebe, S. (2020). Comparative Transcriptome Analysis Provides Molecular Insights into the Interaction of Beet necrotic yellow vein virus and Beet soil-borne mosaic virus with Their Host Sugar Beet. Viruses, 12(1), 76. doi:10.3390/v12010076
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2940386
Lick, S., Krockel, L., Wibberg, D., Winkler, A., Blom, J., Bantleon, A., Goesmann, A., et al. (2020). Pseudomonas carnis sp. nov., isolated from meat. International journal of systematic and evolutionary microbiology. doi:10.1099/ijsem.0.003928
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939461
Drejer, E. B., Chan, D., Haupka, C., Wendisch, V. F., Brautaset, T., & Irla, M. (2020). Methanol-based acetoin production by genetically engineered Bacillus methanolicus. Green Chemistry, 20, 788-802. doi:10.1039/C9GC03950C
PUB | DOI
 
2020 | Datenpublikation | PUB-ID: 2941041 OA
Pucker, B., Feng, T., & Brockington, S. (2020). Next generation sequencing to investigate genomic diversity in Caryophyllales - Kewa caespitosa. Bielefeld University. doi:10.4119/unibi/2941041
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941045 OA
Pucker, B., Feng, T., & Brockington, S. (2020). Next generation sequencing to investigate genomic diversity in Caryophyllales - Pharnaceum exiguum. Bielefeld University. doi:10.4119/unibi/2941045
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941043 OA
Pucker, B., Feng, T., & Brockington, S. (2020). Next generation sequencing to investigate genomic diversity in Caryophyllales - Macarthuria australis. Bielefeld University. doi:10.4119/unibi/2941043
PUB | Dateien verfügbar | DOI
 
2020 | Datenpublikation | PUB-ID: 2941047 OA
Pucker, B. (2020). Arabidopsis thaliana Nd-1 Illumina short reads. Bielefeld University. doi:10.4119/unibi/2941047
PUB | Dateien verfügbar | DOI
 
2020 | Preprint | Veröffentlicht | PUB-ID: 2940694 OA
Pucker, B., Pandey, A., Weisshaar, B., & Stracke, R. (2020). The R2R3-MYB gene family in banana (Musa acuminata): genome-wide identification, classification and expression patterns. bioRxiv
PUB | Download (ext.) | bioRxiv
 
2020 | Preprint | PUB-ID: 2940602
Haghshenas, E., Asghari, H., Stoye, J., Chauve, C., & Hach, F. (2020). HASLR: Fast Hybrid Assembly of Long Reads
PUB | bioRxiv
 
2020 | Zeitschriftenaufsatz | PUB-ID: 2940492
Epping, M. S., Wedde, S., Grundmann, A., Radukic, M., Gröger, H., Hummel, A., & Viefhues, M. (2020). Dielectrophoretic analysis of the impact of isopropyl alcohol on the electric polarisability of Escherichia coli whole-cells. Analytical Bioanalytical Chemistry. doi:10.1007/s00216-020-02451-9
PUB | DOI
 
2020 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938507
Wendisch, V. F. (2020). Genome-reduced Corynebacterium glutamicum fit for biotechnological applications. In A. R. Lara & G. Gosset Lagarda (Eds.), Minimal Cells: Design, Construction, Biotechnological Applications (pp. 95-116). Cham: Springer . doi:10.1007/978-3-030-31897-0_4
PUB | DOI
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937278
Sgobba, E., & Wendisch, V. F. (2020). Synthetic microbial consortia for small molecule production. Current Opinion in Biotechnology, 62, 72–79. doi:10.1016/j.copbio.2019.09.011
PUB | DOI | PubMed | Europe PMC
 
2019 | Datenpublikation | PUB-ID: 2934220 OA
Pucker, B., & Frey, K. (2019). RNA-Seq read coverage depth of splice sites in fungi. Bielefeld University. doi:10.4119/unibi/2934220
PUB | Dateien verfügbar | DOI
 
2019 | Datenpublikation | PUB-ID: 2934226 OA
Pucker, B., & Frey, K. (2019). RNA-Seq read coverage depth of splice sites in animals. Bielefeld University. doi:10.4119/unibi/2934226
PUB | Dateien verfügbar | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935698 OA
Pucker, B., Holtgräwe, D., Stadermann, K. B., Frey, K., Huettel, B., Reinhardt, R., & Weisshaar, B. (2019). A chromosome-level sequence assembly reveals the structure of the Arabidopsis thaliana Nd-1 genome and its gene set. PLOS ONE, 14(5), e0216233. doi:10.1371/journal.pone.0216233
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv | GenBank
 
2019 | Bielefelder E-Dissertation | PUB-ID: 2935794 OA
Pucker, B. (2019). De novo Nd-1 genome assembly reveals genomic diversity of Arabidopsis thaliana and facilitates genome-wide non-canonical splice site analysis across plant species. Bielefeld: Universität Bielefeld. doi:10.4119/unibi/2935794
PUB | PDF | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2936230
Durante, L., Hübner, W., Lauersen, K. J., & Remacle, C. (2019). Characterization of the GPR1/FUN34/YaaH protein family in the green microalga Chlamydomonas suggests their role as intracellular membrane acetate channels. Plant Direct, 3(6), e00148. doi:10.1002/pld3.148
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941092
Liebe, S., Wibberg, D., Maiss, E., & Varrelmann, M. (2019). Application of a Reverse Genetic System for Beet Necrotic Yellow Vein Virus to Study Rz1 Resistance Response in Sugar Beet. Frontiers in plant science, 10. doi:10.3389/fpls.2019.01703
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936079
Timoneda, A., Feng, T., Sheehan, H., Walker‐Hale, N., Pucker, B., Lopez‐Nieves, S., Guo, R., et al. (2019). The evolution of betalain biosynthesis in Caryophyllales. New Phytologist, 224(1), 71-85. doi:10.1111/nph.15980
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2938013
Pucker, B., & Schilbert, H. (2019). Genomics and Transcriptomics Advance in Plant Sciences. In S. P. Singh, S. K. Upadhyay, A. Pandey, & S. Kumar (Eds.), Energy, Environment, and Sustainability. Molecular Approaches in Plant Biology and Environmental Challenges Singapore: Springer. doi:10.1007/978-981-15-0690-1_19
PUB | DOI
 
2019 | Konferenzbeitrag | PUB-ID: 2940489
S. Epping, M., Grundmann, A., Gröger, H., & Viefhues, M. (2019). Dielectrophoretic analysis: a tool for studying the impact of organic solvents on whole-cell biocatalysts. 23rd International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS2019), 1014-1015.
PUB
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2939579
Noster, J., Hansmeier, N., Persicke, M., Chao, T. - C., Kurre, R., Popp, J., Liss, V., et al. (2019). Blocks in Tricarboxylic Acid Cycle of Salmonella enterica Cause Global Perturbation of Carbon Storage, Motility, and Host-Pathogen Interaction. mSphere, 4(6). doi:10.1128/mSphere.00796-19
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Datenpublikation | PUB-ID: 2937972 OA
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University. doi:10.4119/unibi/2937972
PUB | Dateien verfügbar | DOI
 
2019 | Datenpublikation | PUB-ID: 2937697 OA
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Genome assemblies of Musa acuminata Dwarf Cavendish. Bielefeld University. doi:10.4119/unibi/2937697
PUB | Dateien verfügbar | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807 OA
Busche, M., Pucker, B., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2. G3: Genes|Genomes|Genetics, g3.400847.2019. doi:10.1534/g3.119.400847
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2939887
Campanaro, S., Treu, L., Rodriguez-R, L. M., Kovalovszki, A., Ziels, R. M., Maus, I., Zhu, X., et al. (2019). The anaerobic digestion microbiome: a collection of 1600 metagenome-assembled genomes shows high species diversity related to methane production. bioRxiv
PUB | Download (ext.) | bioRxiv
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2908574
Luhmann, N., Lafond, M., Thévenin, A., Ouangraoua, A., Wittler, R., & Chauve, C. (2019). The SCJ Small Parsimony Problem for Weighted Gene Adjacencies. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16(4). doi:10.1109/TCBB.2017.2661761
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2936783
Sheehan, H., Feng, T., Walker‐Hale, N., Lopez‐Nieves, S., Pucker, B., Guo, R., Yim, W. C., et al. (2019). Evolution of L‐DOPA 4,5‐dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales . New Phytologist. doi:10.1111/nph.16089
PUB | DOI | WoS | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2935844 OA
Pucker, B., Schilbert, H., & Schumacher, S. F. (2019). Integrating Molecular Biology and Bioinformatics Education. Journal of Integrative Bioinformatics. doi:10.1515/jib-2019-0005
PUB | PDF | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2935737 OA
Pucker, B., Feng, T., & Brockington, S. F. (2019). Next generation sequencing to investigate genomic diversity in Caryophyllales. bioRxiv
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2934975 OA
Pucker, B. (2019). Mapping-based genome size estimation. bioRxiv
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2934778 OA
Baasner, J. - S., Howard, D., & Pucker, B. (2019). Influence of neighboring small sequence variants on functional impact prediction. bioRxiv
PUB | PDF | Download (ext.) | bioRxiv
 
2019 | Datenpublikation | PUB-ID: 2936278 OA
Pucker, B., Busche, M., Viehöver, P., Weisshaar, B., & Stracke, R. (2019). Small sequence variants between the Musa acuminata cultivars Dwarf Cavendish and DH Pahang. Bielefeld University. doi:10.4119/unibi/2936278
PUB | Dateien verfügbar | DOI
 
2019 | Preprint | Veröffentlicht | PUB-ID: 2939244 OA
Holtgräwe, D., Hausmann, L., Rosleff Soerensen, T., Pucker, B., Viehöver, P., Töpfer, R., & Weisshaar, B. (2019). A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock 'Börner' (Vitis riparia x Vitis cinerea) and its Exploitation for Marker Development and Targeted Mapping. bioRxiv
PUB | Download (ext.) | bioRxiv
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2937135 OA
Pucker, B., Rückert, C., Stracke, R., Viehöver, P., Kalinowski, J., & Weisshaar, B. (2019). Twenty-Five Years of Propagation in Suspension Cell Culture Results in Substantial Alterations of the Arabidopsis Thaliana Genome. Genes, 10(9), 671. doi:10.3390/genes10090671
PUB | PDF | DOI | WoS | PubMed | Europe PMC | bioRxiv | EBI - ENA Project
 

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