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3478 Publikationen

2021 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949947
F. Perez, A. Burgardt, D. R. Kallmann, V. F. Wendisch, and N. Bar, “Dynamic co-cultivation process of Corynebacterium glutamicum strains for the fermentative production of riboflavin”, Fermentation, 2021, 7, : 11.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949961
J. F. Nilsson, L. G. Castellani, W. O. Draghi, E. G. Mogro, D. Wibberg, A. Winkler, L. H. Hansen, A. Schlüter, A. Pühler, J. Kalinowski, et al., “Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress”, FEMS Microbiology Ecology, 2021, 97, : fiaa235.
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2021 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2949074
K. Thiedig, B. Weisshaar, and R. Stracke, “Functional and evolutionary analysis of the Arabidopsis 4R-MYB protein SNAPc4 as part of the SNAP complex”, Plant Physiology, 2021.
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2021 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2946303
L. Bohnenkämper, M. Dias Vieira Braga, D. Dörr, and J. Stoye, “Computing the rearrangement distance of natural genomes”, Journal of Computational Biology, Accepted.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948740 OA
L. Fernandes de Brito, M. Gil Lopez, L. Straube, L. Passaglia, and V. F. Wendisch, “Inorganic phosphate solubilization by rhizosphere bacterium Paenibacillus sonchi: gene expression and physiological functions”, Frontiers in Microbiology, 2020, 11, 588605.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945429
P. Kugler, D. Fröhlich, and V. F. Wendisch, “Development of a Biosensor for Crotonobetaine-CoA-Ligase Screening based on Elucidation of the Escherichia coli Carnitine Metabolism”, ACS Synthetic Biology, 2020, 9, 2460–2471.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949180 OA
T. Walter, K. Veldmann, S. Götker, T. Busche, C. Rückert, A. B. Kashkooli, J. Paulus, K. Cankar, and V. F. Wendisch, “Physiological response of Corynebacterium glutamicum to indole”, Microorganisms, 2020, 8, : 1945.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941820 OA
J. Pfeifenschneider, B. Markert, J. Stolzenberger, T. Brauatset, and V. F. Wendisch, “Transaldolase in Bacillus methanolicus: Biochemical Characterization and Biological Role in Ribulose Monophosphate Cycle”, BMC Microbiology, 2020, 20, : 63.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949766
B. - Y. Kim, H. - B. Jung, J. - Y. Lee, L. Ferrer, H. S. Purwanto, and J. H. Lee, “Production of 4-Hydroxybenzyl Alcohol by Metabolically Engineered Corynebacterium glutamicum”, Microbiology and Biotechnology Letters, 2020, 48, 506-514.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948762 OA
M. Graf, T. Haas, A. Teleki, A. Feith, M. Cerff, W. Wiechert, K. Nöh, T. Busche, J. Kalinowski, and R. Takors, “Revisiting the Growth Modulon of Corynebacterium glutamicum Under Glucose Limited Chemostat Conditions.”, Frontiers in Bioengineering and Biotechnology, 2020, 8, : 584614.
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2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2949681
M. Vortmann, A. K. Stumpf, E. Sgobba, M. E. Dierks-Hofmeister, M. Krehenbrink, V. F. Wendisch, B. Philipp, and B. M. Moerschbacher, “A bottom-up approach towards a bacterial consortium for the biotechnological conversion of chitin to L-lysine”, Applied Microbiology and Biotechnology, Accepted.
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2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2949664
C. Prell, A. Burgardt, F. Meyer, and V. F. Wendisch, “Fermentative production of ʟ-2-hydroxyglutarate by engineered Corynebacterium glutamicum via pathway extension of ʟ-lysine biosynthesis”, Frontiers in Bioengineering and Biotechnology, Accepted.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948756
V. N. Fritsch, V. V. Loi, T. Busche, Q. N. Tung, R. Lill, P. Horvatek, C. Wolz, J. Kalinowski, and H. Antelmann, “The alarmone (p)ppGpp confers tolerance to oxidative stress during the stationary phase by maintenance of redox and iron homeostasis in Staphylococcus aureus”, Free radical biology & medicine, 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949597 OA
I. Maus, T. J. Tubbesing, D. Wibberg, R. Heyer, J. Hassa, G. Tomazetto, L. Huang, B. Bunk, C. Spröer, D. Benndorf, et al., “The Role of Petrimonas mucosa ING2-E5AT in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses”, Microorganisms, 2020, 8, : 2024.
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2020 | Preprint | Veröffentlicht | PUB-ID: 2943037
K. Sielemann, B. Weisshaar, and B. Pucker, “Reference-based QUantification Of gene Dispensability (QUOD)”, bioRxiv, 2020.
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2020 | Datenpublikation | PUB-ID: 2946079 OA
K. Sielemann, B. Weisshaar, and B. Pucker, Reference-based QUantification Of gene Dispensability (QUOD) - test dataset, Bielefeld University, 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941655 OA
D. Holtgräwe, T. Rosleff Soerensen, L. Hausmann, B. Pucker, P. Viehöver, R. Töpfer, and B. Weisshaar, “A Partially Phase-Separated Genome Sequence Assembly of the Vitis Rootstock ‘Börner’ (Vitis riparia × Vitis cinerea) and Its Exploitation for Marker Development and Targeted Mapping”, Frontiers in Plant Science, 2020, 11, : 156.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941669 OA
C. Siadjeu, B. Pucker, P. Viehöver, D. C. Albach, and B. Weisshaar, “High Contiguity De Novo Genome Sequence Assembly of Trifoliate Yam (Dioscorea dumetorum) Using Long Read Sequencing”, Genes, 2020, 11, : 274.
PUB | PDF | DOI | WoS | PubMed | Europe PMC | Preprint | EBI - ENA Project | GenBank
 
2020 | Datenpublikation | PUB-ID: 2941469 OA
B. Pucker, C. Siadjeu, P. Viehöver, D. Albach, and B. Weisshaar, Dioscorea dumetorum genome sequence v1.0, Bielefeld University, 2020.
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2020 | Datenpublikation | PUB-ID: 2942069 OA
H. Schilbert, A. Rempel, and B. Pucker, Gold standard of Nd1 vs TAIR10 sequence variants, Bielefeld University, 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942341 OA
H. Schilbert, A. Rempel, and B. Pucker, “Comparison of Read Mapping and Variant Calling Tools for the Analysis of Plant NGS Data”, Plants, 2020, 9, : 439.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2938807
M. Busche, B. Pucker, P. Viehöver, B. Weisshaar, and R. Stracke, “Genome Sequencing of Musa acuminata Dwarf Cavendish Reveals a Duplication of a Large Segment of Chromosome 2”, G3: Genes|Genomes|Genetics, 2020, 10, 37-42.
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2020 | Datenpublikation | PUB-ID: 2941437 OA
B. Frommer, D. Holtgräwe, and B. Weisshaar, Dataset describing RNA editing sites in the mitochondrial genome of 'Boerner' (Vitis riparia x Vitis cinerea), Bielefeld University, 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2942459 OA
B. Frommer, D. Holtgräwe, L. Hausmann, P. Viehöver, B. Huettel, R. Töpfer, and B. Weisshaar, “Genome Sequences of Both Organelles of the Grapevine Rootstock Cultivar ‘Börner’”, Microbiology Resource Announcements, 2020, 9, : e01471-19.
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2020 | Datenpublikation | PUB-ID: 2941430 OA
B. Frommer, D. Holtgräwe, and B. Weisshaar, Dataset describing RNA editing sites in the chloroplast genome of 'Boerner' (Vitis riparia x Vitis cinerea), Bielefeld University, 2020.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2945521 OA
M. Kuhl, L. Gläser, Y. Rebets, C. Rückert, N. Sarkar, T. Hartsch, J. Kalinowski, A. Luzhetskyy, and C. Wittmann, “Microparticles globally reprogram Streptomyces albus toward accelerated morphogenesis, streamlined carbon core metabolism and enhanced production of the antituberculosis polyketide pamamycin”, Biotechnology and Bioengineering, 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945474 OA
J. Hemmerich, M. Labib, C. Steffens, S. J. Reich, M. Weiske, M. Baumgart, C. Rückert, M. Ruwe, D. Siebert, V. F. Wendisch, et al., “Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion”, Microbial Biotechnology, 2020, 13, 2020-2031.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949076 OA
K. Sielemann, Z. Elbeck, A. Gärtner, A. Brodehl, C. Stanasiuk, H. Fox, L. Paluszkiewicz, J. Tiesmeier, S. Wlost, J. Gummert, et al., “Distinct Myocardial Transcriptomic Profiles of Cardiomyopathies Stratified by the Mutant Genes”, Genes, 2020, 11, : 1430.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949440 OA
R. Braun, N. Schönberger, S. Vinke, F. Lederer, J. Kalinowski, and K. Pollmann, “Application of Next Generation Sequencing (NGS) in Phage Displayed Peptide Selection to Support the Identification of Arsenic-Binding Motifs”, Viruses, 2020, 12, : 1360.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946320 OA
J. Droste, M. Kulisch, T. Wolf, L. Schaffert, S. Schneiker-Bekel, A. Pühler, and J. Kalinowski, “A maltose-regulated large genomic region is activated by the transcriptional regulator MalT in Actinoplanes sp. SE50/110”, Applied microbiology and biotechnology, 2020, 104, 9283–9294.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949422
J. F. Guerrero-Garzon, E. Madland, M. Zehl, M. Singh, S. Rezaei, F. L. Aachmann, G. Courtade, E. Urban, C. Rückert, T. Busche, et al., “Class IV Lasso Peptides Synergistically Induce Proliferation of Cancer Cells and Sensitize Them to Doxorubicin”, iScience, 2020, 23, : 101785.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949125 OA
A. L. Höving, K. Sielemann, J. Greiner, B. Kaltschmidt, C. Knabbe, and C. Kaltschmidt, “Transcriptome Analysis Reveals High Similarities between Adult Human Cardiac Stem Cells and Neural Crest-Derived Stem Cells”, Biology, 2020, 9, : 435.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948721 OA
V. Ortseifen, M. Viefhues, L. Wobbe, and A. Grünberger, “Microfluidics for Biotechnology: Bridging Gaps to Foster Microfluidic Applications”, Frontiers in Bioengineering and Biotechnology, 2020, 8, : 589074.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948936
R. Stadler, C. Hain, C. Cieslak, and R. Stranzenbach, “Molecular pathogenesis of cutaneous lymphoma-Future directions”, Experimental Dermatology , 2020.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948401 OA
M. Moore, C. Wesemann, N. Gossmann, A. Sahm, J. Krüger, A. Sczyrba, and K. - J. Dietz, “ConCysFind: a pipeline tool to predict conserved amino acids of protein sequences across the plant kingdom”, BMC Bioinformatics, 2020, 21, : 490.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946331
M. Sahin, J. M. Neumann, B. Riefke, H. Bednarz, K. Gutberlet, M. Giampa, K. Niehaus, and A. Fatangare, “Spatial evaluation of long-term metabolic changes induced by cisplatin nephrotoxicity.”, Toxicology letters, 2020, 334, 36-43.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2949080 OA
J. Droste, V. Ortseifen, L. Schaffert, M. Persicke, S. Schneiker-Bekel, A. Pühler, and J. Kalinowski, “The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.”, BMC genomics, 2020, 21, : 818.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945217 OA
K. T. Gurwitz, P. Singh Gaur, L. J. Bellis, L. Larcombe, E. Alloza, B. L. Balint, A. Botzki, J. Dimec, V. Dominguez Del Angel, P. L. Fernandes, et al., “A framework to assess the quality and impact of bioinformatics training across ELIXIR.”, PLoS computational biology, 2020, 16, : e1007976.
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2020 | Zeitschriftenaufsatz | Angenommen | PUB-ID: 2948972
J. C. Setubal, J. Stoye, and B. E. Dutilh, “Editorial: Computational Methods for Microbiome Analysis”, Frontiers in Genetics, Accepted, Research Topic: Computational Methods for Microbiome Analysis.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2941708
F. Perozeni, S. Cazzaniga, T. Baier, F. Zanoni, G. Zoccatelli, K. J. Lauersen, L. Wobbe, and M. Ballottari, “Turning a green alga red: engineering astaxanthin biosynthesis by intragenic pseudogene revival in Chlamydomonas reinhardtii”, Plant biotechnology journal, 2020, : pbi.13364.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2946565
B. Xu, L. Taylor, B. Pucker, T. Feng, B. J. Glover, and S. F. Brockington, “The land plant‐specific MIXTA‐MYB lineage is implicated in the early evolution of the plant cuticle and the colonization of land”, New Phytologist, 2020, : nph.16997.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948771
S. Matar, A. Kumar, D. Holtgräwe, B. Weisshaar, and S. Melzer, “The transition to flowering in winter rapeseed during vernalization”, Plant, Cell & Environment, 2020, : pce.13946.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2948720 OA
B. Pucker, A. Schwandner, S. Becker, L. Hausmann, P. Viehöver, R. Töpfer, B. Weisshaar, and D. Holtgräwe, “RNA-Seq Time Series of Vitis vinifera Bud Development Reveals Correlation of Expression Patterns with the Local Temperature Profile”, Plants, 2020, 9, : 1548.
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2020 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2948760
M. A. Toniutti, F. J. Albicoro, L. G. Castellani, S. L. Lopez Garcia, L. V. Fornasero, N. E. Zuber, L. M. Vera, C. Vacca, J. H. Cafiero, A. Winkler, et al., “Genome sequence of Bradyrhizobium yuanmingense strain P10 130, a highly efficient nitrogen-fixing bacterium that could be used for Desmodium incanum inoculation.”, Gene, 2020.
PUB | DOI | PubMed | Europe PMC
 
2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945205 OA
S. Theuerl, J. Klang, B. Hülsemann, T. Mächtig, and J. Hassa, “Microbiome Diversity and Community-Level Change Points within Manure-based small Biogas Plants”, Microorganisms, 2020, 8.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946440 OA
B. Pucker, A. Pandey, B. Weisshaar, and R. Stracke, “The R2R3-MYB gene family in banana (Musa acuminata): Genome-wide identification, classification and expression patterns”, PLoS One, 2020, 15, : e0239275.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2944597 OA
B. Pucker, F. Reiher, and H. Schilbert, “Automatic identification of players in the flavonoid biosynthesis with application on the biomedicinal plant Croton tiglium”, Plants, 2020, 9, 1103.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2946157 OA
L. Schaffert, L. Jacob, S. Schneiker-Bekel, M. Persicke, C. März, C. Rückert, A. Pühler, and J. Kalinowski, “pSETT4, an Improved φC31-Based Integrative Vector System for Actinoplanes sp. SE50/110”, Microbiology Resource Announcements, 2020, 9, : e00596-20.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945573
B. Delépine, M. Gil Lopez, M. Carnicer, C. Vicente, V. F. Wendisch, and S. Heux, “Charting the metabolic landscape of the facultative methylotroph Bacillus methanolicus”, mSystems, 2020, 5, : e00745-20.
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2020 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2945828 OA
C. Haupka, B. Délepine, M. Irla, S. Heux, and V. F. Wendisch, “Flux enforcement for fermentative production of 5-aminovalerate and glutarate by Corynebacterium glutamicum”, Catalysts, 2020, 10, : 1065.
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