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414 Publikationen

2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773
Jünemann, S., Prior, K., Albersmeier, A., Albaum, S., Kalinowski, J., Goesmann, A., Stoye, J., et al. (2014). GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE, 9(9), e107014. doi:10.1371/journal.pone.0107014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2723541
Ander, C. (2014). Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomes. Bielefeld: Universitätsbibliothek Bielefeld.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker, R., Stadermann, K. B., Doppmeier, D., Kalinowski, J., Stoye, J., Straube, J., Winnebald, J., et al. (2014). ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics, 30(16), 2247-2254. doi:10.1093/bioinformatics/btu205
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Schwientek, P., Neshat, A., Kalinowski, J., Klein, A., Rückert, C., Schneiker-Bekel, S., Wendler, S., et al. (2014). Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology, 190, 85-95. doi:10.1016/j.jbiotec.2014.03.013
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2690122
Luhmann, N., Chauve, C., Stoye, J., & Wittler, R. (2014). Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework. In C. Sérgio (Ed.), LNBI: Vol. 8826. Proc. of BSB 2014 (pp. 135-143). Springer Verlag. doi:10.1007/978-3-319-12418-6_17
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Jakobi, T., Brinkrolf, K., Tauch, A., Noll, T., Stoye, J., Pühler, A., & Goesmann, A. (2014). Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing. Journal of Biotechnology, 190, 64-75. doi:10.1016/j.jbiotec.2014.07.437
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2014 | Bielefelder E-Dissertation | PUB-ID: 2677466
Hoffmann, N. (2014). Computational methods for high-throughput metabolomics. Bielefeld: Universität Bielefeld.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691246
Fueller, E., Schaefer, D., Fischer, U., Krell, P., Stanulla, M., Borkhardt, A., & Slany, R. K. (2014). Genomic Inverse PCR for Exploration of Ligated Breakpoints (GIPFEL), a New Method to Detect Translocations in Leukemia. PloS one, 9(8), 104419. doi:10.1371/journal.pone.0104419
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2014 | Lexikoneintrag | Veröffentlicht | PUB-ID: 2693552
Stoye, J. (2014). Suffix Tree Construction. In M. - Y. Kao (Ed.), Encyclopedia of Algorithms Springer Verlag. doi:10.1007/978-3-642-27848-8_414-2
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
Hoffmann, N., Wilhelm, M., Doebbe, A., Niehaus, K., & Stoye, J. (2014). BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry. Bioinformatics, 30(7), 988-995. doi:10.1093/bioinformatics/btt738
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693409
Fredrich, E., Ander, C., Stoye, J., Brune, I., & Tauch, A. (2014). Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle. BIOspektrum, 20(5), 294-296. doi:10.1007/s12268-014-0468-4
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
Klippel, B., Sahm, K., Basner, A., Wiebusch, S., John, P., Lorenz, U., Peters, A., et al. (2014). Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria. Extremophiles, 18(5), 853-863. doi:10.1007/s00792-014-0676-3
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691279
Binder, V., Bartenhagen, C., Okpanyi, V., Gombert, M., Moehlendick, B., Behrens, B., Klein, H. - U., et al. (2014). A New Workflow for Whole-Genome Sequencing of Single Human Cells. Human mutation. doi:10.1002/humu.22625
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2014 | Bielefelder E-Dissertation | PUB-ID: 2673418
Mascher, M. (2014). POPSEQ Anchoring and ordering contig assemblies from next generation sequencing data by population sequencing. Bielefeld: Universität Bielefeld.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Henrich, B., Rumming, M., Sczyrba, A., Velleuer, E., Dietrich, R., Gerlach, W., Gombert, M., et al. (2014). Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE, 9(3), e92297. doi:10.1371/journal.pone.0092297
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2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2611641
Dias Vieira Braga, M., & Stoye, J. (2013). Restricted DCJ-Indel Model Revisited. In J. C. Setubal & N. F. Almeida (Eds.), Lecture Notes in Bioinformatics: Vol. 8213. Advances in Bioinformatics and Computational Biology. BSB 2013 (pp. 36-46). Cham: Springer Verlag. doi:10.1007/978-3-319-02624-4_4
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611630
Willing, E., Zaccaria, S., Dias Vieira Braga, M., & Stoye, J. (2013). On the Inversion-Indel Distance. BMC Bioinformatics, 14(Suppl 15: Proc. of RECOMB-CG 2013), S3. doi:10.1186/1471-2105-14-S15-S3
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611648
Dias Vieira Braga, M., Chauve, C., Dörr, D., Jahn, K., Stoye, J., Thévenin, A., & Wittler, R. (2013). The Potential of Family-Free Genome Comparison. In C. Chauve, N. El-Mabrouk, & E. Tannier (Eds.), Computational Biology Series: Vol. 19. Models and Algorithms for Genome Evolution (pp. 287-307). Springer Verlag. doi:10.1007/978-1-4471-5298-9_13
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575011
Ander, C., Schulz-Trieglaff, O. B., Stoye, J., & Cox, A. J. (2013). metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences. BMC Bioinformatics, 14(Suppl 5: Proc. of RECOMB-Seq 2013), S2. doi:10.1186/1471-2105-14-S5-S2
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555342
He, P., Hao, K., Blom, J., Rückert, C., Vater, J., Mao, Z., Wu, Y., et al. (2013). Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites. Journal of biotechnology, 164(2), 281-291. doi:10.1016/j.jbiotec.2012.12.014
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