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410 Publikationen

2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2900111
Kowada LAB, Doerr D, Dantas S, Stoye J. New Genome Similarity Measures based on Conserved Gene Adjacencies. In: Singh M, ed. Research in Computational Molecular Biology. RECOMB 2016. Lecture Notes in Bioinformatics (LNBI). Vol 9649. Springer; 2016: 204-224.
PUB | DOI
 
2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2901740
Luhmann N, Thévenin A, Ouangraoua A, Wittler R, Chauve C. The SCJ small parsimony problem for weighted gene adjacencies. In: Proceedings 12th International Symposium, ISBRA 2016. Lecture Notes in Computer Science. Vol 9683. Springer International Publishing; 2016: 200-210.
PUB | DOI | Download (ext.) | arXiv
 
2016 | Konferenzband | Veröffentlicht | PUB-ID: 2912258
Hölldobler S, ed. Genfamilienfreier Genomvergleich. LNI. 2016;D-16:91-100.
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748
Krahn T, Wibberg D, Maus I, et al. Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses. Genome Announcements. 2015;3(4):e00850-15.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677844
Dias Vieira Braga M, Stoye J. Sorting linear genomes with rearrangements and indels. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2015;12(3):500-506.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726366
Viduani Martinez FH, Feijão P, Dias Vieira Braga M, Stoye J. On the family-free DCJ distance and similarity. Algorithms for Molecular Biology. 2015;10: 13.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2715682
Henning P, Kuich JL, Hoffmann N, Stefan K. Maui-VIA: a user-friendly software for visual identification, alignment, correction, and quantification of gas chromatography–mass spectrometry data. Frontiers in Bioengineering and Biotechnology. 2015;2(84).
PUB | DOI | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766708
Chen C, Bartenhagen C, Gombert M, et al. Next-generation-sequencing of recurrent childhood high hyperdiploid acute lymphoblastic leukemia reveals mutations typically associated with high risk patients. Leukemia research. 2015.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764612
Wittler R, Marschall T, Schönhuth A, Makinen V. Repeat- and error-aware comparison of deletions. Bioinformatics. 2015;31(18):2947-2954.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2757497
Holley G, Wittler R, Stoye J. Bloom Filter Trie - a data structure for pan-genome storage. In: Proceedings of WABI 2015. LNBI. Vol 9289. 2015: 217-230.
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2015 | Bielefelder E-Dissertation | PUB-ID: 2786037
Hilker R. Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains. Bielefeld: Bielefeld University; 2015.
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2015 | Konferenzband | Veröffentlicht | PUB-ID: 2780229
Meidanis J, Stoye J, eds. Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Bioinformatics. BMC Bioinformatics. 2015;16(Supplement 14).
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2015 | Konferenzband | Veröffentlicht | PUB-ID: 2780232
Meidanis J, Stoye J, eds. Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Genomics. BMC Genomics. 2015;16(Supplement 10).
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2684241
Viduani Martinez FH, Feijão P, Dias Vieira Braga M, Stoye J. On the family-free DCJ distance. In: Brown D, Morgenstern B, eds. Algorithms in Bioinformatics. WABI 2014. Lecture Notes in Bioinformatics. Vol 8701. Berlin ; Heidelberg: Springer Verlag; 2014: 174-186.
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033
Dörr D, Stoye J, Böcker S, Jahn K. Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics. 2014;15(Suppl. 6: Proc. of RECOMB-CG 2014):S2.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685362
Lechner M, Hernandez-Rosales M, Dörr D, et al. Orthology Detection Combining Clustering and Synteny for Very Large Datasets. PLoS ONE. 2014;9(8):e105015.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773
Jünemann S, Prior K, Albersmeier A, et al. GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE. 2014;9(9):e107014.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2723541
Ander C. Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomes. Bielefeld: Universitätsbibliothek Bielefeld; 2014.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker R, Stadermann KB, Doppmeier D, et al. ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics. 2014;30(16):2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Schwientek P, Neshat A, Kalinowski J, et al. Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology. 2014;190:85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 

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