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421 Publikationen

2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
ReadXplorer - Visualization and Analysis of Mapped Sequences
Hilker, Rolf, ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics 30 (16). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek, Patrick, Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology 190 (). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2690122
Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework
Luhmann, Nina, Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework. Proc. of BSB 2014 8826 (). , 2014
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing
Jakobi, Tobias, Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing. Journal of Biotechnology 190 (). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2677466 OA
Computational methods for high-throughput metabolomics
Hoffmann, Nils, Computational methods for high-throughput metabolomics. (). Bielefeld, 2014
PUB | PDF
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691246
Genomic Inverse PCR for Exploration of Ligated Breakpoints (GIPFEL), a New Method to Detect Translocations in Leukemia
Fueller, Elisa, Genomic Inverse PCR for Exploration of Ligated Breakpoints (GIPFEL), a New Method to Detect Translocations in Leukemia. PloS one 9 (8). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Lexikoneintrag | Veröffentlicht | PUB-ID: 2693552
Suffix Tree Construction
Stoye, Jens, Suffix Tree Construction. Encyclopedia of Algorithms (). , 2014
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693409
Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle
Fredrich, Eugenie, Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle. BIOspektrum 20 (5). , 2014
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry
Hoffmann, Nils, BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry. Bioinformatics 30 (7). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria
Klippel, Barbara, Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria. Extremophiles 18 (5). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691279
A New Workflow for Whole-Genome Sequencing of Single Human Cells
Binder, Vera, A New Workflow for Whole-Genome Sequencing of Single Human Cells. Human mutation (). , 2014
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2014 | Bielefelder E-Dissertation | PUB-ID: 2673418 OA
POPSEQ Anchoring and ordering contig assemblies from next generation sequencing data by population sequencing
Mascher, Martin, POPSEQ Anchoring and ordering contig assemblies from next generation sequencing data by population sequencing. (). Bielefeld, 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma
Henrich, Birgit, Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE 9 (3). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing
Bolzan de Campos, Samanta, Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (Brassica napus L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65 (3). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2611641
Restricted DCJ-Indel Model Revisited
Dias Vieira Braga, Marília, Restricted DCJ-Indel Model Revisited. Advances in Bioinformatics and Computational Biology. BSB 2013 8213 (). Cham, 2013
PUB | DOI
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611630 OA
On the Inversion-Indel Distance
Willing, Eyla, On the Inversion-Indel Distance. BMC Bioinformatics 14 (Suppl 15: Proc. of RECOMB-CG 2013). , 2013
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611648
The Potential of Family-Free Genome Comparison
Dias Vieira Braga, Marília, The Potential of Family-Free Genome Comparison. Models and Algorithms for Genome Evolution 19 (). , 2013
PUB | DOI
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575011
metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences
Ander, Christina, metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences. BMC Bioinformatics 14 (Suppl 5: Proc. of RECOMB-Seq 2013). , 2013
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555342
Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites
He, Pengfei, Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites. Journal of biotechnology 164 (2). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology 31 (12). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2492825
In vitro-induced response patterns of antileukemic T cells: characterization by spectratyping and immunophenotyping
Reuther, Susanne, In vitro-induced response patterns of antileukemic T cells: characterization by spectratyping and immunophenotyping. Clinical and Experimental Medicine 13 (1). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611643
The Genesis of the DCJ Formula
Bergeron, Anne, The Genesis of the DCJ Formula. Models and Algorithms for Genome Evolution 19 (). , 2013
PUB | DOI
 
2013 | Bielefelder E-Dissertation | PUB-ID: 2604883 OA
Comparative genomics on gene and single nucleotide level
Blom, Jochen, Comparative genomics on gene and single nucleotide level. (). Bielefeld, 2013
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2013 | Bielefelder E-Dissertation | PUB-ID: 2594322 OA
VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications
Janowski, Sebastian Jan, VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications. (). Bielefeld, 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575361
Next-generation-sequencing-spectratyping reveals public T-cell receptor repertoires in pediatric very severe aplastic anemia and identifies a beta chain CDR3 sequence associated with hepatitis-induced pathogenesis
Krell, Pina, Next-generation-sequencing-spectratyping reveals public T-cell receptor repertoires in pediatric very severe aplastic anemia and identifies a beta chain CDR3 sequence associated with hepatitis-induced pathogenesis. Haematologica 98 (9). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Lexikoneintrag | Veröffentlicht | PUB-ID: 2577323
Taxonomic classification of metagenomic shotgun sequences with CARMA3
Gerlach, Wolfgang, Taxonomic classification of metagenomic shotgun sequences with CARMA3. Encyclopedia of Metagenomics (). , 2013
PUB | DOI
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914
Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis
Bergmann, Thorsten, Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis. Osteoarthritis And Cartilage 21 (8). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Updating benchtop sequencing performance comparison. Nature Biotechnology 31 (4). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Konferenzband | Veröffentlicht | PUB-ID: 2616537
Algorithms in Bioinformatics
Darling, Aaron, Algorithms in Bioinformatics. 8126 (). Heidelberg, 2013
PUB | DOI
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611633 OA
Statistics for approximate gene clusters
Jahn, Katharina, Statistics for approximate gene clusters. BMC Bioinformatics 14 (Suppl 15: Proc. of RECOMB-CG 2013). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek, Patrick, Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media. Journal of Biotechnology 167 (2). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro, Víctor M, Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Environmental Microbiology 15 (1). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2552092 OA
Unraveling overlapping deletions by agglomerative clustering
Wittler, Roland, Unraveling overlapping deletions by agglomerative clustering. BMC Genomics 14 (Suppl 1). , 2013
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659331
Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes
Feijão, Pedro, Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes. IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (4). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski, Martha, MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets. Journal of Biotechnology 167 (2). , 2013
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560353 OA
Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions
Dörr, Daniel, Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology 7 (1). , 2012
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642 OA
Gene family assignment-free comparative genomics
Dörr, Daniel, Gene family assignment-free comparative genomics. BMC Bioinformatics 13 (Suppl 19: Proc. of RECOMB-CG 2012). , 2012
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160 OA
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient
Schröder, Jasmin, Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239 OA
Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets
Hoffmann, Nils, Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. BMC Bioinformatics 13 (1). , 2012
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512644 OA
Multiple genome comparison based on overlap regions of pairwise local alignments
Jahn, Katharina, Multiple genome comparison based on overlap regions of pairwise local alignments. BMC Bioinformatics 13 (Suppl. 19: Proc. of RECOMB-CG 2012). , 2012
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia
Trost, Eva, Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia. Journal of bacteriology 194 (12). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490949
Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10
Zschuttig, Anke, Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10. PLoS ONE 7 (3). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709879
Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains
Doerr, D, Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains. HealthGIS '12: Proceedings of the First ACM SIGSPATIAL International Workshop on Use of GIS in Public Health (). , 2012
PUB | Download (ext.)
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2527519
Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications
Ruijter, Jan M, Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications. Methods. A companion to methods in enzymology (San Diego, Calif.) 59 (1). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553484
Probabilistic Arithmetic Automata and Their Applications
Marschall, T., Probabilistic Arithmetic Automata and Their Applications. Ieee/Acm Transactions On Computational Biology And Bioinformatics 9 (6). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Bielefelder E-Dissertation | PUB-ID: 2468026 OA
Taxonomic classification of metagenomic sequences
Gerlach, Wolfgang, Taxonomic classification of metagenomic sequences. (). Bielefeld, 2012
PUB | PDF
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553300
Linearization of ancestral multichromosomal genomes
Manuch, Jan, Linearization of ancestral multichromosomal genomes. BMC Bioinformatics 13 (Proc. of RECOMB-CG 2012). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659289
Genome Sequence and Assembly of Bos indicus
Canavez, F. C., Genome Sequence and Assembly of Bos indicus. Journal of Heredity 103 (3). , 2012
PUB | DOI | WoS | PubMed | Europe PMC
 
2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2659385
A GRASP-based Heuristic for the Project Portfolio Selection Problem
Mira, Cleber, A GRASP-based Heuristic for the Project Portfolio Selection Problem. 2012 IEEE 15th International Conference on Computational Science and Engineering (). , 2012
PUB | DOI | WoS
 
2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553455
The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification
De Maayer, Pieter, The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification. Bmc Genomics 13 (1). , 2012
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