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419 Publikationen

2010 | Bielefelder E-Dissertation | PUB-ID: 2301975 OA
Wittkop, T.: Clustering biological data by unraveling hidden transitive substructures. Bielefeld University, Bielefeld (Germany) (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2308298
Bunkowski, A., Maddula, S., Davies, A.N., Westhoff, M., Litterst, P., Bödeker, B., Baumbach, J.I.: One-year time series of investigations of analytes within human breath using ion mobility spectrometry. Int. J. Ion Mobility Spectrometry. 13, 141-148 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2425329
Bunkowski, A.: Software tool for coupling chromatographic total ion current dependencies of GC/MSD and MCC/IMS. Int. J. Ion Mobil. Spectrom. 13, 169-175 (2010).
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2010 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2445157
Bergeron, A., Mixtacki, J., Stoye, J.: Computing the Genomic Distance in Linear Time. In: Apostolico, A., Dress, A., and Parida, L. (eds.) Dagstuhl Seminar Proceedings: 10231 Abstracts Collection : Structure Discovery in Biology: Motifs, Networks & Phylogenies. 10231, p. 18. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, Dagstuhl (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
Schneider, J., Vorhölter, F.-J., Trost, E., Blom, J., Musa, Y.R., Neuweger, H., Niehaus, K., Schatschneider, S., Tauch, A., Goesmann, A.: CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research. 9, 1660-1672 (2010).
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2425332
Burcsi, P., Cicalese, F., Fici, G., Lipták, Z.: On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching. In: Boldi, P. (ed.) Fun with Algorithms: 5th International Conference, FUN 2010, Ischia, Italy, June 2-4, 2010. Proceedings. Lecture Notes in Computer Science. 6099, p. 89-101. Springer, Berlin, Heidelberg (2010).
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2425351
Jahn, K.: Efficient Computation of Approximate Gene Clusters Based on Reference Occurrences. Proc. RECOMB-CG. 6398, p. 264-277. (2010).
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2010 | Bielefelder E-Dissertation | PUB-ID: 2302499 OA
Quitzau, J.A.A.: Biological applications for de Bruijn subgraphs and interval group testing. Bielefeld University, Bielefeld (Germany) (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893893 OA
Husemann, P., Stoye, J.: Phylogenetic Comparative Assembly. Algorithms for Molecular Biology. 5, 3 (2010).
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1918836
Besenbacher, S., Schwikowski, B., Stoye, J.: Indexing and Searching a Mass Spectrometry Database. In: Elomaa, T., Mannila, H., and Orponen, P. (eds.) Algorithms and Applications: Essays Dedicated to Esko Ukkonen on the Occasion of His 60th Birthday. LNCS. 6060, p. 62-76. (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
Trost, E., Ott, L., Schneider, J., Schröder, J., Jaenicke, S., Goesmann, A., Husemann, P., Stoye, J., Alves Dorella, F., Souza Rocha, F., de Castro Soares, S., D'Afonseca, V., Miyoshi, A., Ruiz, J., Silva, A., Azevedo, V., Burkovski, A., Guiso, N., Join-Lambert, O.F., Kayal, S., Tauch, A.: The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence. BMC Genomics. 11, : 728 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275 OA
Trost, E., Götker, S., Schneider, J., Schneiker-Bekel, S., Szczepanowski, R., Tilker, A., Viehöver, P., Arnold, W., Bekel, T., Blom, J., Gartemann, K.-H., Linke, B., Goesmann, A., Pühler, A., Shukla, S.K., Tauch, A.: Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics. 11, : 91 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795670
Wittkop, T., Emig, D., Lange, S.J., Rahmann, S., Albrecht, M., Morris, J.H., Böcker, S., Stoye, J., Baumbach, J.: Partitioning Biological Data with Transitivity Clustering. Nature Methods. 7, 419-420 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796445
Smits, T.H.M., Rezzonico, F., Kamber, T., Blom, J., Goesmann, A., Frey, J.E., Duffy, B.: Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp. MOLECULAR PLANT-MICROBE INTERACTIONS. 23, 384-393 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1898012
Blin, G., Faye, D., Stoye, J.: Finding Nested Common Intervals Efficiently. Journal of Computational Biology. 17, 1183-1194 (2010).
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
Mittard-Runte, V., Bekel, T., Blom, J., Dondrup, M., Henckel, K., Jaenicke, S., Krause, L., Linke, B., Neuweger, H., Schneiker-Bekel, S., Goesmann, A.: Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions. In: Cock, J.M., Tessmar-Raible, K., Boyen, C., and Viard, F. (eds.) Introduction to Marine Genomics (Advances in Marine Genomics). 1, p. 315-396. Springer Netherlands, Netherlands (2010).
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919217
Wittler, R., Stoye, J.: Consistency of Sequence-based Gene Clusters. Proc. of Recomb-CG 2010. LNBI. 6398, p. 252-263. Springer Verlag (2010).
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893890
Husemann, P., Stoye, J.: Repeat-aware Comparative Genome Assembly. Proc. of GCB 2010. LNI. P-173, p. 61-70. (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588556
Husemann, P., Stoye, J.: r2cat: Synteny Plots and Comparative Assembly. Bioinformatics. 26, 570-571 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897997
Bergeron, A., Medvedev, P., Stoye, J.: Rearrangement Models and Single-Cut Operations. Journal of Computational Biology. 17, 1213-1225 (2010).
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