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415 Publikationen

2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919215
M. Dias Vieira Braga, E. Willing, and J. Stoye, “Genomic Distance with DCJ and Indels”, Proc. of WABI 2010, LNBI, vol. 6293, 2010, pp.90-101.
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929860
P. Schwientek, et al., “Global gene expression analysis in nonfailing and failing myocardium pre- and postpulsatile and nonpulsatile ventricular assist device support”, PHYSIOLOGICAL GENOMICS, vol. 42, 2010, pp. 397-405.
PUB | DOI | WoS | PubMed | Europe PMC
 
2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1930110
B. Joseph, et al., “Comparative Genome Biology of a Serogroup B Carriage and Disease Strain Supports a Polygenic Nature of Meningococcal Virulence”, JOURNAL OF BACTERIOLOGY, vol. 192, 2010, pp. 5363-5377.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589663
A. Bergeron, J. Mixtacki, and J. Stoye, “A New Linear Time Algorithm to Compute the Genomic Distance via the Double Cut and Join Distance”, Theoretical Computer Science, vol. 410, 2009, pp. 5300-5316.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2427059
B. Escoffier, M. Milanič, and V.T. Paschos, “Simple and fast reoptimizations for the Steiner tree problem”, Algorithmic Operations Research, vol. 4, 2009, pp. 86-94.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2308924
F. Cicalese and M. Milanic, “Competitive evaluation of threshold functions in the priced information model”, Annals of Operations Research, vol. 188, 2009, pp. 111-132.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2426437
A. Bunkowski, et al., “MCC/IMS signals in human breath related to sarcoidosis-results of a feasibility study using an automated peak finding procedure”, Journal of Breath Research, vol. 3, 2009, pp. 046001.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2426487
S. Böcker, et al., “SIRIUS: decomposing isotope patterns for metabolite identification”, Bioinformatics, vol. 25, 2009, pp. 218-224.
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2009 | Preprint | Veröffentlicht | PUB-ID: 2426653
F. Cicalese, et al., “On the Complexity of Searching in Trees: Average-case Minimization”, 2009.
PUB | arXiv
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2426660
F. Cicalese, F. Manne, and Q. Xin, “Faster Deterministic Communication in Radio Networks”, Algorithmica, vol. 54, 2009, pp. 226-242.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2427118
J.A. Engelmann, et al., “Modeling cross-hybridization on phylogenetic DNA microarrays increases the detection power of closely related species”, Molecular Ecology Resources, vol. 9, 2009, pp. 83-93.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2305073 OA
S. Oehm, Comparing organisms on the level of metabolism, Bielefeld (Germany): Bielefeld University, 2009.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2301318 OA
H. Neuweger, MeltDB : a software platform for the analysis and integration of metabolomics experiment data, Bielefeld (Germany): Bielefeld University, 2009.
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2009 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2659405
P. Feijão and J. Meidanis, “SCJ: A Variant of Breakpoint Distance for Which Sorting, Genome Median and Genome Halving Problems Are Easy”, Algorithms in Bioinformatics, S.L. Salzberg and T. Warnow, eds., Lecture Notes in Computer Science, vol. 5724, 2009, pp.85-96.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2427161
M. Kamiński, V.V. Lozin, and M. Milanič, “Recent developments on graphs of bounded clique-width”, Discrete Appl. Math., vol. 157, 2009, pp. 2747-2761.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2427173
M. Kamiński, P. Medvedev, and M. Milanič, “On the plane-width of graphs”, Electronic Notes in Discrete Mathematics, vol. 34, 2009, pp. 633-637.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919206
M. Dias Vieira Braga and J. Stoye, “Counting All DCJ Sorting Scenarios”, Proc. of Recomb-CG 2009, LNBI, vol. 5817, 2009, pp.36-47.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2426605
F. Cicalese, G. Fici, and Z. Lipták, “Searching for Jumbled Patterns in Strings”, Proc. of the Prague Stringology Conference 2009, 2009, pp.105-117.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2303240 OA
T. Gagie, New algorithms and lower bounds for sequential-access data compression, Bielefeld (Germany): Bielefeld University, 2009.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2302608 OA
I. Herms, Probabilistic arithmetic automata : applications of a stochastic computational framework in biological sequence analysis, Bielefeld (Germany): Bielefeld University, 2009.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2406118
N. Välimäki, et al., “Engineering a compressed suffix tree implementation”, Journal of Experimental Algorithmics (JEA), vol. 14, 2009, pp. 4.2-2:4.23.
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2009 | Bielefelder E-Dissertation | PUB-ID: 2304745 OA
E. Fritzilas, Combinatorial aspects of low-rank matrix factorization and two applications in bioinformatics, Bielefeld (Germany): Bielefeld University, 2009.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919207
G. Blin and J. Stoye, “Finding Nested Common Intervals Efficiently”, Proc. of Recomb-CG 2009, LNBI, vol. 5817, 2009, pp.59-69.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018390
J. Herold, et al., “A way towards analyzing high-content bioimage data by means of semantic annotation and visual data mining”, SPIE Medical Imaging, 2009.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018422
J. Ontrup, et al., “BIIGLE - Web 2.0 enabled labelling and exploring of images from the Arctic deep-sea observatory HAUSGARTEN”, OCEANS 2009 - Europe, Bremen: 2009.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018427
H. Qureshi, et al., “A Robust Adaptive Wavelet-based Method for Classification of Meningioma Histology Images”, MICCAI«2009 Workshop on Optical Tissue Image Analysis in Microscopy, Histology, and Endoscopy, 2009.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783187 OA
J. Blom, et al., “EDGAR: a software framework for the comparative analysis of prokaryotic genomes”, BMC Bioinformatics, vol. 10, 2009, : 154.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636062
J. Ontrup, et al., “Detecting, Assessing, and Monitoring Relevant Topics in Virtual Information Environments”, IEEE Transactions on Knowledge and Data Engineering, vol. 21, 2009, pp. 415-427.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1898137
K. Jahn and J. Stoye, “Approximative Gencluster und ihre Anwendung in der komparativen Genomik”, Informatik-Spektrum, vol. 32, 2009, pp. 288-300.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893884
P. Husemann and J. Stoye, “Phylogenetic Comparative Assembly”, Proc. of WABI 2009, LNBI, vol. 5724, 2009, pp.145-156.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635314 OA
N.N. Diaz, et al., “TACOA - Taxonomic classification of environmental genomic fragments using a kernelized nearest neighbor approach”, BMC Bioinformatics, vol. 10, 2009, pp. 56.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1635321 OA
M. Dondrup, et al., “EMMA 2-A MAGE-compliant system for the collaborative analysis and integration of microarray data”, BMC Bioinformatics, vol. 10, 2009, : 50.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591507
J. Stoye and R. Wittler, “A Unified Approach for Reconstructing Ancient Gene Clusters”, IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 6, 2009, pp. 387-400.
PUB | DOI | Download (ext.) | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589098 OA
W. Gerlach, et al., “WebCARMA: a web application for the functional and taxonomic classification of unassembled metagenomic reads”, BMC Bioinformatics, vol. 10, 2009, pp. 430.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1589531
S. Albaum, et al., “Qupe-a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments”, Bioinformatics, vol. 25, 2009, pp. 3128-3134.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1590204
M. Brudno, et al., “A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG)”, BIOINFORMATICS, vol. 25, 2009, pp. 2863-2864.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588783
A. Purser, et al., “Use of machine-learning algorithms for the automated detection of cold-water coral habitats: a pilot study”, Marine Ecology Progress Series, vol. 397, 2009, pp. 241-251.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1898105
S. Böcker, et al., “Computation of Median Gene Clusters”, Journal of Computational Biology, vol. 16, 2009, pp. 1085-1099.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1591319
N. Hoffmann and J. Stoye, “ChromA: signal-based retention time alignment for chromatography-mass spectrometry data”, Bioinformatics, vol. 25, 2009, pp. 2080-2081.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588760 OA
M. Dias Vieira Braga, C. Gautier, and M.-F. Sagot, “An asymmetric approach to preserve common intervals while sorting by reversals”, Algorithms for Molecular Biology, vol. 4, 2009, pp. 16.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919209
P. Medvedev and J. Stoye, “Rearrangement Models and Single-Cut Operations”, Comparative Genomics : International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, Lecture Notes in Computer Science, vol. 5817, Berlin, Heidelberg: Springer, 2009, pp.84-97.
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2009 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018440
T. Schoening, et al., “BIIGLE Tools - A Web 2.0 Approach for Visual Bioimage Database Mining”, IV 09 - Intl. Conference on Information Visualization, 2009.
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2009 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 1918945
J. Stoye, “Computational Short Read Metagenomics”, Presented at the JOBIM 2009, Nantes, France, 2009.
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2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634447
T. Bekel, et al., “The Sequence Analysis and Management System - SAMS-2.0: Data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies”, Journal of Biotechnology, vol. 140, 2009, pp. 3-12.
PUB | DOI | WoS | PubMed | Europe PMC
 
2009 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1634615
M. Zeschnigk, et al., “Massive parallel bisulfite sequencing of CG-rich DNA fragments reveals that methylation of many X-chromosomal CpG islands in female blood DNA is incomplete”, HUMAN MOLECULAR GENETICS, vol. 18, 2009, pp. 1439-1448.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2427252
V.E. Alekseev, et al., “The Maximum Independent Set Problem in Planar Graphs”, Proc. MFCS 2008, 2008, pp.96-107.
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2008 | Bielefelder E-Dissertation | PUB-ID: 2306324 OA
J. Baumbach, CoryneRegNet : a reference database and analysis platform for corynebacterial gene regulatory networks, Bielefeld (Germany): Bielefeld University, 2008.
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2008 | Bielefelder E-Dissertation | PUB-ID: 2302950 OA
J. Zakotnik, The double cut and join operation and its applications to genome rearrangements, Bielefeld (Germany): Bielefeld University, 2008.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659345
M.T. Oliveira, et al., “Structure and evolution of the mitochondrial genomes of Haematobia irritans and Stomoxys calcitrans: The Muscidae (Diptera: Calyptratae) perspective”, Molecular Phylogenetics and Evolution, vol. 48, 2008, pp. 850-857.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2308903
F. Cicalese and E.S. Laber, “Function Evaluation Via Linear Programming in the Priced Information Model”, Proc. ICALP 2008, 2008, pp.173-185.
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2008 | Report | Veröffentlicht | PUB-ID: 2308927 OA
F. Cicalese and M. Milanivc, On Parsimony Haplotyping, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Universität Bielefeld, Technische Fakultät, 2008.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2308974
E. Fritzilas, Y.A. Rios-Solis, and S. Rahmann, “Structural Identifiability in Low-Rank Matrix Factorization”, Computing and Combinatorics 14th Annual International Conference, COCOON 2008 Dalian, China, June 27-29, 2008 Proceedings, X. Hu and J. Wang, eds., Lecture Notes in Computer Science, 5092, Berlin u.a.: Springer, 2008, pp.140-148.
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2008 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2499103
M. Milanivc and J. Monnot, “The Complexity of the Exact Weighted Independent Set Problem”, Combinatorial optimization and theoretical computer science: interfaces and perspectives : 30th anniversary of the LAMSADE, 2008, pp.393-432.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2499108
J. Mixtacki, “Genome Halving under DCJ Revisited”, Computing and Combinatorics. 14th Annual International Conference, COCOON 2008 Dalian, China, June 27-29, 2008 Proceedings, X. Hu and J. Wang, eds., Lecture Notes in Computer Science, 5092, 2008, pp.276-286.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919198
J.A.A. Quitzau and J. Stoye, “Detecting Repeat Families in Incompletely Sequenced Genomes”, Proc. of WABI 2008, LNBI, vol. 5251, 2008, pp.342-353.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498846
J. Boyar and P. Medvedev, “The relative worst order ratio applied to seat reservation”, ACM Transactions on Algorithms, vol. 4, 2008, pp. 1-22.
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2008 | Report | Veröffentlicht | PUB-ID: 2499065
F. Cicalese and M. Milanic, Computing with Priced Information: game trees and the value dependent cost model, Technische Fakultät, Universität Bielefeld, 2008.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2499072
I. Herms and S. Rahmann, “Computing Alignment Seed Sensitivity with Probabilistic Arithmetic Automata”, Algorithms in Bioinformatics: 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. Proceedings, K.A. Crandall and J. Lagergren, eds., Lecture Notes in Computer Science, 5251, Berlin u.a.: Springer, 2008, pp.318-329.
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2008 | Report | Veröffentlicht | PUB-ID: 2308930 OA
F. Cicalese and M. Milanivc, Computing with Priced Information: game trees and the value dependent cost model, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Universität Bielefeld, Technische Fakultät, 2008.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499098
V.V. Lozin and M. Milanic, “A polynomial algorithm to find an independent set of maximum weight in a fork-free graph”, J. Discr. Alg., vol. 6, 2008, pp. 595-604.
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2008 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2499120
S. Rahmann and G.W. Klau, “Integer Linear Programming Techniques for Discovering Approximate Gene Clusters”, Bioinformatics Algorithms: Techniques and Applications, I.I. Mǎndoiu and A. Zelikovsky, eds., Wiley Interscience, 2008, pp.203-222.
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2008 | Report | PUB-ID: 1970459 OA
J.A.A. Quitzau and J. Stoye, A space efficient representation for sparse de Bruijn subgraphs, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Technische Fakultät der Universität Bielefeld, 2008.
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2008 | Report | PUB-ID: 1970461 OA
T. Ejaz, S. Rahmann, and J. Stoye, Online Abelian Pattern Matching, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Technische Fakultät der Universität Bielefeld, 2008.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636699
H. Neuweger, et al., “MeltDB: a software platform for the analysis and integration of metabolomics experiment data”, Bioinformatics, vol. 24, 2008, pp. 2726-2732.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Bielefelder E-Dissertation | PUB-ID: 2305571 OA
C. Bannert, Flexible protein annotation with sequence- and secondary structure information, Bielefeld (Germany): Bielefeld University, 2008.
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2008 | Lexikoneintrag | Veröffentlicht | PUB-ID: 1918834
J. Stoye, “Suffix Tree Construction in RAM (1997; Farach-Colton)”, Encyclopedia of Algorithms, M.-Y. Kao, ed., Springer Verlag, 2008, pp.925-928.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919192
S. Böcker, et al., “Computation of Median Gene Clusters”, Proc. of RECOMB 2008, LNBI, vol. 4955, 2008, pp.331-345.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919200
A. Bergeron, J. Mixtacki, and J. Stoye, “On Computing the Breakpoint Reuse Rate in Rearrangement Scenarios”, Proc. of Recomb-CG 2008, LNBI, vol. 5267, 2008, pp.226-240.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018405
C. Loyek, F.G. Woermann, and T.W. Nattkemper, “Detection of Focal Cortical Dysplasia in MRI Using Textural Features”, Proceedings of BVM 2008, Berlin, Heidelberg: Springer Verlag, 2008, pp.432-436.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1636280 OA
W. Timm, et al., “Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics”, BMC Bioinformatics, vol. 9, 2008, pp. 443.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592257
C. Schoen, et al., “Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis”, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, vol. 105, 2008, pp. 3473-3478.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1592737
S. Boecker, et al., “DECOMP - from interpreting mass spectrometry peaks to solving the money changing problem”, BIOINFORMATICS, vol. 24, 2008, pp. 591-593.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587304
S. Hazelhurst, et al., “An overview of the wcd EST clustering tool”, BIOINFORMATICS, vol. 24, 2008, pp. 1542-1546.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587078
K.-B. Schürmann and J. Stoye, “Counting suffix arrays and strings”, THEORETICAL COMPUTER SCIENCE, vol. 395, 2008, pp. 220-234.
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1587052
C. Martin, et al., “Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification”, Bioinformatics, vol. 24, 2008, pp. 1568-1574.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586009
L. Krause, et al., “Taxonomic composition and gene content of a methane-producing microbial community isolated from a biogas reactor”, JOURNAL OF BIOTECHNOLOGY, vol. 136, 2008, pp. 91-101.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1586785 OA
S. Oehm, et al., “Comparative Pathway Analyzer - a web server for comparative analysis, clustering and visualization of metabolic networks in multiple organisms”, NUCLEIC ACIDS RESEARCH, vol. 36, 2008, pp. W433-W437.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1585939
A. Tauch, et al., “Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids”, Journal of Biotechnology, vol. 136, 2008, pp. 22-30.
PUB | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1783364 OA
L. Krause, et al., “Phylogenetic classification of short environmental DNA fragments”, Nucleic Acids Research, vol. 36, 2008, pp. 2230-2239.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919195
A. Bergeron, J. Mixtacki, and J. Stoye, “HP Distance via Double Cut and Join Distance”, Combinatorial Pattern Matching. 19th Annual Symposium, CPM 2008, Pisa, Italy, June 18-20, 2008 Proceedings, Lecture Notes in Computer Science, 5029, 2008, pp.56-68.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018409
C. Martin and T.W. Nattkemper, “A Tree Index to Support Clustering Based Exploratory Data Analysis”, Bioinformatics Research and Development : Second International Conference, BIRD 2008 Vienna, Austria, July 7-9, 2008 Proceedings, Communications in Computer and Information Science, vol. 13, Berlin, Heidelberg: Springer, 2008, pp.1-15.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018435
A. Scherbart, et al., “Improved Mass Spectrometry Peak Intensity Prediction by Adaptive Feature Weighting”, International Conference on Neural Information Processing, Auckland, New Zealand: 2008.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018381
S. Albaum, et al., “ProSE - "Software as a Service" for Quantitative Proteomics (Poster abstract)”, HUPO 7th Annual World Congress, 2008.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018398
J. Herold, et al., “Flexible Synapse Detection in Fluorescence Micrographs by Modeling Human Expert Grading”, Proc. of 2008 IEEE International Symposium on Biomedical Imaging, 2008.
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2008 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018432
A. Scherbart and T.W. Nattkemper, “The Diversity of Regression Ensembles Combining Bagging and Random Subspace Method”, International Conference on Neural Information Processing, 2008.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2018412
C. Martin, et al., “Genome feature exploration using hyperbolic Self-Organizing Maps”, Proceedings of the 6th International Workshop on Self-Organizing Maps (WSOM 2007), Bielefeld: Bielefeld University, 2007.
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2007 | Report | Veröffentlicht | PUB-ID: 2499308
B. Escoffier, M. Milanič, and V.T. Paschos, Simple and fast reoptimizations for the Steiner tree problem, DIMACS, Center for Discrete Mathematics and Theoretical Computer Science, NJ, 2007.
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2007 | Report | Veröffentlicht | PUB-ID: 2308810 OA
S. Böcker, et al., Identifying metabolites with integer decomposition techniques, using only their mass spectrometric isotope patterns, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Technical Faculty, Bielefeld University, 2007.
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2007 | Bielefelder E-Dissertation | PUB-ID: 2302005 OA
L. Krause, From single genomes to natural microbial communities : novel methods for the high-throughput analysis of genomic sequences, Bielefeld (Germany): Bielefeld University, 2007.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2499472
V.V. Lozin and M. Milanic, “Tree-width and Optimization in Bounded Degree Graphs”, Proc. 33rd International Workshop on Graph-Theoretic Concepts in Computer Science (WG 2007), vol. 4769, 2007, pp.45-54.
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2007 | Bielefelder E-Dissertation | PUB-ID: 2305131 OA
S.A. de Carvalho Junior, Algorithms for improving the design and production of oligonucleotide microarrays, Bielefeld (Germany): Bielefeld University, 2007.
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2007 | Report | Veröffentlicht | PUB-ID: 2308854 OA
F. Cicalese and J.A.A. Quitzau, 2-Stage Fault Tolerant Interval Group Testing, Forschungsberichte der Technischen Fakultät, Abteilung Informationstechnik / Universität Bielefeld, Bielefeld: Universität Bielefeld, Technische Fakultät, 2007.
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2007 | Report | Veröffentlicht | PUB-ID: 2499449
M. Kaminski, V.V. Lozin, and M. Milanic, Recent Developments on Graphs of Bounded Clique-width, Rutgers Center for Operations Research, Rutgers University, NJ, 2007.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499456
G.W. Klau, et al., “Integer linear programming approaches for non-unique probe selection”, Discrete Applied Mathematics, vol. 155, 2007, pp. 840-856.
PUB | DOI | WoS
 
2007 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1918828
T. Schmidt and J. Stoye, “Chapter 12: Gecko and GhostFam - Rigorous and Efficient Gene Cluster Detection in Prokaryotic Genomes”, Comparative Genomics, Volume 2, N.H. Bergman, ed., Methods in Molecular Biology, vol. 396, Totowa, NJ: Humana Press Inc., 2007, pp.165-182.
PUB | DOI | PubMed | Europe PMC
 
2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499284
F. Cicalese, et al., “Overlaps help: Improved bounds for group testing with interval queries”, Discrete Applied Mathematics, vol. 155, 2007, pp. 288-299.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499429
D. Gerlach, et al., “Deep Metazoan Phylogeny”, In Silico Biology, vol. 7, 2007, pp. Article 15.
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2007 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2499467
V.V. Lozin and M. Milanic, “Maximum independent sets in graphs of low degree”, Proc. 18th Annual ACM-SIAM Symposium on Discrete Algorithms (SODA 2007), 2007, pp.874-880.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499481
S. Rahmann, et al., “Exact and Heuristic Algorithms for Weighted Cluster Editing”, Comput Syst Bioinformatics Conf, vol. 6, 2007, pp. 391-401.
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2007 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2499135
J. Baumbach, et al., “IMS2- An integrated medical software system for early lung cancer detection using ion mobility spectrometry data of human breath”, Journal of Integrative Bioinformatics, vol. 4, 2007, pp. 75.
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