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419 Publikationen

2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing
Bolzan de Campos, Samanta, Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65 (3). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659331
Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes
Feijão, Pedro, Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes. IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (4). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski, Martha, MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets. Journal of Biotechnology 167 (2). , 2013
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560353 OA
Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions
Dörr, Daniel, Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology 7 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642 OA
Gene family assignment-free comparative genomics
Dörr, Daniel, Gene family assignment-free comparative genomics. BMC Bioinformatics 13 (Suppl 19: Proc. of RECOMB-CG 2012). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160 OA
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient
Schröder, Jasmin, Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517239 OA
Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets
Hoffmann, Nils, Combining peak- and chromatogram-based retention time alignment algorithms for multiple chromatography-mass spectrometry datasets. BMC Bioinformatics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512644 OA
Multiple genome comparison based on overlap regions of pairwise local alignments
Jahn, Katharina, Multiple genome comparison based on overlap regions of pairwise local alignments. BMC Bioinformatics 13 (Suppl. 19: Proc. of RECOMB-CG 2012). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2513347
Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia
Trost, Eva, Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia. Journal of bacteriology 194 (12). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490949
Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10
Zschuttig, Anke, Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10. PLoS ONE 7 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709879
Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains
Doerr, D, Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains. HealthGIS '12: Proceedings of the First ACM SIGSPATIAL International Workshop on Use of GIS in Public Health (). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2527519
Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications
Ruijter, Jan M, Evaluation of qPCR curve analysis methods for reliable biomarker discovery: Bias, resolution, precision, and implications. Methods. A companion to methods in enzymology (San Diego, Calif.) 59 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553484
Probabilistic Arithmetic Automata and Their Applications
Marschall, T., Probabilistic Arithmetic Automata and Their Applications. Ieee/Acm Transactions On Computational Biology And Bioinformatics 9 (6). , 2012
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2012 | Bielefelder E-Dissertation | PUB-ID: 2468026 OA
Taxonomic classification of metagenomic sequences
Gerlach, Wolfgang, Taxonomic classification of metagenomic sequences. (). Bielefeld, 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553300
Linearization of ancestral multichromosomal genomes
Manuch, Jan, Linearization of ancestral multichromosomal genomes. BMC Bioinformatics 13 (Proc. of RECOMB-CG 2012). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659289
Genome Sequence and Assembly of Bos indicus
Canavez, F. C., Genome Sequence and Assembly of Bos indicus. Journal of Heredity 103 (3). , 2012
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2012 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2659385
A GRASP-based Heuristic for the Project Portfolio Selection Problem
Mira, Cleber, A GRASP-based Heuristic for the Project Portfolio Selection Problem. 2012 IEEE 15th International Conference on Computational Science and Engineering (). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2553455
The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification
De Maayer, Pieter, The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification. Bmc Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2486060 OA
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110
Schwientek, Patrick, The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110. BMC Genomics 13 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659280
Rearrangement-Based Phylogeny Using the Single-Cut-or-Join Operation.
Biller, Priscilla, Rearrangement-Based Phylogeny Using the Single-Cut-or-Join Operation.. IEEE/ACM transactions on computational biology and bioinformatics 10 (1). , 2012
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2012 | Konferenzband | Veröffentlicht | PUB-ID: 2510416
Combinatorial Pattern Matching
Kärkkäinen, Juha, Combinatorial Pattern Matching. 7354 (). Heidelberg, 2012
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2012 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2468382 OA
Generic Software Frameworks for GC-MS Based Metabolomics
Hoffmann, Nils, Generic Software Frameworks for GC-MS Based Metabolomics. Metabolomics (). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2510984
UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ
Hilker, Rolf, UniMoG - A unifying framework for genomic distance calculation and sorting based on DCJ. Bioinformatics 28 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2542210
Sequence of Two Plasmids from Clostridium perfringens Chicken Necrotic Enteritis Isolates and Comparison with C. perfringens Conjugative Plasmids
Parreira, Valeria R., Sequence of Two Plasmids from Clostridium perfringens Chicken Necrotic Enteritis Isolates and Comparison with C. perfringens Conjugative Plasmids. PLoS ONE 7 (11). , 2012
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2012 | Bielefelder E-Dissertation | PUB-ID: 2533144 OA
Development of computational methods for the analysis of metagenome and metatranscriptome data
Zakrzewski, Martha, Development of computational methods for the analysis of metagenome and metatranscriptome data. (). Bielefeld, 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2493233
ALGORITHMS FOR JUMBLED PATTERN MATCHING IN STRINGS
Burcsi, Peter, ALGORITHMS FOR JUMBLED PATTERN MATCHING IN STRINGS. International Journal of Foundations of Computer Science 23 (02). , 2012
PUB | DOI | WoS | arXiv
 
2012 | Bielefelder E-Dissertation | PUB-ID: 2484427 OA
Genomics and transcriptomics of the industrial acarbose producer Actinoplanes sp. SE50/110
Schwientek, Patrick, Genomics and transcriptomics of the industrial acarbose producer Actinoplanes sp. SE50/110. (). Bielefeld, 2012
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2012 | Bielefelder E-Dissertation | PUB-ID: 2517237 OA
MCC-IMS data analysis using automated spectra processing and explorative visualisation methods
Bunkowski, Alexander, MCC-IMS data analysis using automated spectra processing and explorative visualisation methods. (). Bielefeld, 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526281
Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32
Zischka, M., Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. Journal of Bacteriology 194 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526298
Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester
Maus, Irena, Complete Genome Sequence of the Hydrogenotrophic, Methanogenic Archaeon Methanoculleus bourgensis Strain MS2T, Isolated from a Sewage Sludge Digester. Journal of Bacteriology 194 (19). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2526933
Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties
Dohrmann, Anja B, Importance of rare taxa for bacterial diversity in the rhizosphere of Bt- and conventional maize varieties. The ISME journal 7 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2517230
Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing
Jünemann, Sebastian, Bacterial Community Shift in Treated Periodontitis Patients Revealed by Ion Torrent 16S rRNA Gene Amplicon Sequencing. PLoS ONE 7 (8). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2501312
Metabolite fingerprinting of barley whole seeds, endosperms, and embryos during industrial malting
Gorzolka, Karin, Metabolite fingerprinting of barley whole seeds, endosperms, and embryos during industrial malting. Journal of Biotechnology 159 (3). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2490286
Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information
Vogel, Ulrich, Ion Torrent PGM sequencing for genomic typing of Neisseria meningitidis for rapid determination of multiple layers of typing information. Journal of clinical microbiology 50 (6). , 2012
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897974
Balanced Vertices in Trees and a Simpler Algorithm to Compute the Genomic Distance
Erdős, Péter L., Balanced Vertices in Trees and a Simpler Algorithm to Compute the Genomic Distance. Applied Mathematics Letters 24 (1). , 2011
PUB | DOI | WoS | arXiv
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396558 OA
On the weight of indels in genomic distances
Dias Vieira Braga, Marília, On the weight of indels in genomic distances. BMC Bioinformatics 12 (Suppl 9: RECOMB-CG 2011). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2396509 OA
Genomic distance under gene substitutions
Dias Vieira Braga, Marília, Genomic distance under gene substitutions. BMC Bioinformatics 12 (Suppl 9: Proc. of RECOMB-CG 2011). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2091794
Double Cut and Join with Insertions and Deletions
Dias Vieira Braga, Marília, Double Cut and Join with Insertions and Deletions. Journal of Computational Biology 18 (9). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2091790
Restricted DCJ Model. Rearrangement Problems with Chromosome Reincorporation
Kovac, Jakub, Restricted DCJ Model. Rearrangement Problems with Chromosome Reincorporation. Journal of Computational Biology 18 (9). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354746
Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology
Schwientek, Patrick, Sequencing of high G + C microbial genomes using the ultrafast pyrosequencing technology. Journal of Biotechnology 155 (1). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375634
The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis
Pothier, Joël F., The ubiquitous plasmid pXap41 in the invasive phytopathogen Xanthomonas arboricola pv. pruni: complete sequence and comparative genomic analysis. FEMS Microbiology Letters 323 (1). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2404767
The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides.
Niu, Ben, The Genome of the Plant Growth-Promoting Rhizobacterium Paenibacillus polymyxa M-1 Contains Nine Sites Dedicated to Nonribosomal Synthesis of Lipopeptides and Polyketides.. Journal of Bacteriology 193 (20). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2354731
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
Wibberg, Daniel, Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid. Journal of Biotechnology 155 (1). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659339
SCJ: A Breakpoint-Like Distance that Simplifies Several Rearrangement Problems
Feijão, Pedro, SCJ: A Breakpoint-Like Distance that Simplifies Several Rearrangement Problems. IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (5). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326511
Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42
Rückert, Christian, Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42. Journal of Biotechnology 155 (1). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2373808
Multivariate Image Mining
Herold, Julia, Multivariate Image Mining. Wiley Interdisciplinary Reviews: DATA MINING AND KNOWLEDGE DISCOVERY 1 (1). , 2011
PUB | DOI | WoS
 
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2659373
The SinBiota 2.0 Biodiversity Information System
Mira, Cleber, The SinBiota 2.0 Biodiversity Information System. 2011 IEEE Seventh International Conference on eScience (). , 2011
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2401639
On prefix normal words
Fici, Gabriele, On prefix normal words. Development in Language Theory. 15th International Conference (DLT 2011). Proceedings 6795 (). Berlin ; Heidelberg, 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2401665
KABOOM! A new suffix-array based algorithm for clustering expression data
Hazelhurst, Scott, KABOOM! A new suffix-array based algorithm for clustering expression data. Bioinformatics 27 (24). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2375954
Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons
Borriss, Rainer, Relationship of Bacillus amyloliquefaciens clades associated with strains DSM 7T and FZB42T: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on complete genome sequence comparisons. Int J Syst Evol Microbiol 61 (8). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2472468
Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen
Llop, P., Erwinia amylovora novel plasmid pEI70: Complete sequence, biogeography, and role in aggressiveness in the fire blight phytopathogen. PLoS one 6 (12). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2423955
Efficient Reconstruction of RC-Equivalent Strings
Cicalese, Ferdinando, Efficient Reconstruction of RC-Equivalent Strings. Proc. WOCA 6460 (). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326445
RAPYD - Rapid Annotation Platform for Yeast Data
Schneider, Jessica, RAPYD - Rapid Annotation Platform for Yeast Data. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2307104
Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1
Smits, Theo H. M., Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1. PLoS ONE 6 (7). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2448409
The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity
Imperi, F., The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity. IUBMB life 63 (12). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326455
RhizoRegNet-A database of rhizobial transcription factors and regulatory networks
Krol, Elizaveta, RhizoRegNet-A database of rhizobial transcription factors and regulatory networks. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326518
Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions
Szczepanowski, Rafael, Sequencing and comparative analysis of IncP-1 alpha antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2329973
Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes
Wittler, Roland, Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes. 12 (Suppl. 9). , 2011
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2425344
Efficient Reconstruction of RC-Equivalent Strings
Cicalese, Ferdinando, Efficient Reconstruction of RC-Equivalent Strings. Combinatorial Algorithms : 21st International Workshop, IWOCA 2010, London, UK, July 26-28, 2010, Revised Selected Papers 6460 (). Berlin, Heidelberg, 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290032
Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome
Joseph, Biju, Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome. PLoS ONE 6 (4). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093389
Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594
Schoen, Christoph, Whole-Genome Sequence of the Transformable Neisseria meningitidis Serogroup A Strain WUE2594. Journal of Bacteriology 193 (8). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2289887
Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis
Hinse, D., Complete Genome Analysis of Streptococcus gallolyticus subsp gallolyticus, an Emerging Pathogen of Infective Endocarditis. 49 (). , 2011
PUB | WoS
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289952
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
Blom, Jochen, Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming. Bioinformatics 27 (10). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Bielefelder E-Dissertation | PUB-ID: 2324501 OA
Bioinformatic approaches for genome finishing
Husemann, Peter, Bioinformatic approaches for genome finishing. (). Bielefeld, 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2425310
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Wolfsheimer, Stefan, Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling. BMC Bioinformatics 12 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2310613
Tractability results for the Consecutive-Ones Property with multiplicity
Chauve, Cedric, Tractability results for the Consecutive-Ones Property with multiplicity. Proceedings of CPM 2011 6661 (). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2289928
Comparative genomics of Lactobacillus
Kant, Ravi, Comparative genomics of Lactobacillus. Microbial Biotechnology 4 (3). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2492807
Highly skewed T-cell receptor V-beta chain repertoire in the bone marrow is associated with response to immunosuppressive drug therapy in children with very severe aplastic anemia
Schuster, F R, Highly skewed T-cell receptor V-beta chain repertoire in the bone marrow is associated with response to immunosuppressive drug therapy in children with very severe aplastic anemia. Blood Cancer Journal 1 (3). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2017892
The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome
Schneiker-Bekel, Susanne, The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1918550
Common Intervals of Multiple Permutations
Heber, Steffen, Common Intervals of Multiple Permutations. Algorithmica 60 (2). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2036058
Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean
Margaret, Isabel, Symbiotic properties and first analyses of the genomic sequence of the fast growing model strain Sinorhizobium fredii HH103 nodulating soybean. Journal of Biotechnology 155 (1). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2087955
Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
Hackl, Matthias, Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering. Journal of Biotechnology 153 (1-2). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2298170 OA
Taxonomic classification of metagenomic shotgun sequences with CARMA3.
Gerlach, Wolfgang, Taxonomic classification of metagenomic shotgun sequences with CARMA3.. Nucleic Acids Res 39 (14). , 2011
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2003418
Genome Sequence of an Erwinia amylovora Strain with Pathogenicity Restricted to Rubus Plants
Powney, Rachel, Genome Sequence of an Erwinia amylovora Strain with Pathogenicity Restricted to Rubus Plants. Journal of Bacteriology 193 (3). , 2011
PUB | DOI | WoS | PubMed | Europe PMC
 
2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2091787
Consistency of Sequence-Based Gene Clusters
Wittler, Roland, Consistency of Sequence-Based Gene Clusters. Journal of Computational Biology 18 (9). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2093398
Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden
Brankatschk, Kerstin, Genome of a European Fresh-Vegetable Food Safety Outbreak Strain of Salmonella enterica subsp enterica Serovar Weltevreden. Journal of Bacteriology 193 (8). , 2011
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2091779
Swiftly Computing Center Strings
Hufsky, Franziska, Swiftly Computing Center Strings. BMC Bioinformatics 12 (1). , 2011
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2010 | Bielefelder E-Dissertation | PUB-ID: 2301939 OA
Phylogeny-based analysis of gene clusters
Wittler, Roland, Phylogeny-based analysis of gene clusters. (). Bielefeld (Germany), 2010
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2010 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2907492
A New Linear Time Algorithm to Compute the Genomic Distance Via the Double Cut and Join Distance
Bergeron, Anne, A New Linear Time Algorithm to Compute the Genomic Distance Via the Double Cut and Join Distance. Structure Discovery in Biology: Motifs, Networks & Phylogenies 10231 (). Dagstuhl, Germany, 2010
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2010 | Bielefelder E-Dissertation | PUB-ID: 2303705 OA
Approximate common intervals based gene cluster models
Jahn, Katharina, Approximate common intervals based gene cluster models. (). Bielefeld (Germany), 2010
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2010 | Bielefelder E-Dissertation | PUB-ID: 2301975 OA
Clustering biological data by unraveling hidden transitive substructures
Wittkop, Tobias, Clustering biological data by unraveling hidden transitive substructures. (). Bielefeld (Germany), 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2308298
One-year time series of investigations of analytes within human breath using ion mobility spectrometry
Bunkowski, Alexander, One-year time series of investigations of analytes within human breath using ion mobility spectrometry. Int. J. Ion Mobility Spectrometry 13 (3-4). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2425329
Software tool for coupling chromatographic total ion current dependencies of GC/MSD and MCC/IMS
Bunkowski, Alexander, Software tool for coupling chromatographic total ion current dependencies of GC/MSD and MCC/IMS. Int. J. Ion Mobil. Spectrom. 13 (3-4). , 2010
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2010 | Kurzbeitrag Konferenz / Poster | Veröffentlicht | PUB-ID: 2445157
Computing the Genomic Distance in Linear Time
Bergeron, Anne, Computing the Genomic Distance in Linear Time. Dagstuhl Seminar Proceedings: 10231 Abstracts Collection : Structure Discovery in Biology: Motifs, Networks & Phylogenies 10231 (). Dagstuhl, 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1929692
CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks
Schneider, Jessica, CARMEN - Comparative Analysis and in silico Reconstruction of organism-specific MEtabolic Networks. Genetics and Molecular Research 9 (3). , 2010
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2425332
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Burcsi, Péter, On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching. Fun with Algorithms: 5th International Conference, FUN 2010, Ischia, Italy, June 2-4, 2010. Proceedings 6099 (). Berlin, Heidelberg, 2010
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2425351
Efficient Computation of Approximate Gene Clusters Based on Reference Occurrences
Jahn, Katherina, Efficient Computation of Approximate Gene Clusters Based on Reference Occurrences. Proc. RECOMB-CG 6398 (). , 2010
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2010 | Bielefelder E-Dissertation | PUB-ID: 2302499 OA
Biological applications for de Bruijn subgraphs and interval group testing
Quitzau, José Augusto Amgarten, Biological applications for de Bruijn subgraphs and interval group testing. (). Bielefeld (Germany), 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1893893 OA
Phylogenetic Comparative Assembly
Husemann, Peter, Phylogenetic Comparative Assembly. Algorithms for Molecular Biology 5 (1). , 2010
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1918836
Indexing and Searching a Mass Spectrometry Database
Besenbacher, Søren, Indexing and Searching a Mass Spectrometry Database. Algorithms and Applications: Essays Dedicated to Esko Ukkonen on the Occasion of His 60th Birthday 6060 (). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1966439
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence
Trost, Eva, The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence. BMC Genomics 11 (1). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1785275 OA
Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion
Trost, Eva, Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion. BMC Genomics 11 (1). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1795670
Partitioning Biological Data with Transitivity Clustering
Wittkop, Tobias, Partitioning Biological Data with Transitivity Clustering. Nature Methods 7 (6). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1796445
Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.
Smits, Theo H. M., Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.. MOLECULAR PLANT-MICROBE INTERACTIONS 23 (4). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1898012
Finding Nested Common Intervals Efficiently
Blin, Guillaume, Finding Nested Common Intervals Efficiently. Journal of Computational Biology 17 (9). , 2010
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2010 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 1894907
Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions
Mittard-Runte, Virginie, Practical Guide: Genomic Techniques and How to Apply Them to Marine Questions. Introduction to Marine Genomics (Advances in Marine Genomics) 1 (). Netherlands, 2010
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1919217
Consistency of Sequence-based Gene Clusters
Wittler, Roland, Consistency of Sequence-based Gene Clusters. Proc. of Recomb-CG 2010 6398 (). , 2010
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2010 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 1893890
Repeat-aware Comparative Genome Assembly
Husemann, Peter, Repeat-aware Comparative Genome Assembly. Proc. of GCB 2010 P-173 (). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588556
r2cat: Synteny Plots and Comparative Assembly
Husemann, Peter, r2cat: Synteny Plots and Comparative Assembly. Bioinformatics 26 (4). , 2010
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1897997
Rearrangement Models and Single-Cut Operations
Bergeron, Anne, Rearrangement Models and Single-Cut Operations. Journal of Computational Biology 17 (9). , 2010
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