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414 Publikationen

2019 | Zeitschriftenaufsatz | Im Druck | PUB-ID: 2937712
Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants
Rubert, Diego, Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants. BMC Genomics (). , 2019
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2937148
Finding All Maximal Perfect Haplotype Blocks in Linear Time
Alanko, Jarno, Finding All Maximal Perfect Haplotype Blocks in Linear Time. Proceedings of WABI 2019 143 (). Dagstuhl, 2019
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2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936900
Alignment- and reference-free phylogenomics with colored de Bruijn graphs
Wittler, Roland, Alignment- and reference-free phylogenomics with colored de Bruijn graphs. Proceedings of WABI 2019 143 (). Dagstuhl, Germany, 2019
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2019 | Datenpublikation | PUB-ID: 2936848
Supplementary Data for "Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants"
Dörr, Daniel, Supplementary Data for "Analysis of local genome rearrangement improves resolution of ancestral genomic maps in plants". (). , 2019
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2019 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2935998
Computational Methods for Microbiome Analysis
Setubal, João C., Computational Methods for Microbiome Analysis. (). Lausanne, 2019
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2019 | Preprint | PUB-ID: 2935604
Alignment- and reference-free phylogenomics with colored de-Bruijn graphs
Wittler, Roland, Alignment- and reference-free phylogenomics with colored de-Bruijn graphs. arXiv:1905.04165 (). , 2019
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2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
A Perspective on Comparative and Functional Genomics
Dörr, Daniel, A Perspective on Comparative and Functional Genomics. Bioinformatics and Phylogenetics 29 (). Cham, 2019
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933161
GOTrapper. A tool to navigate through branches of gene ontology hierarchy
Hassan, Hezha, GOTrapper. A tool to navigate through branches of gene ontology hierarchy. BMC Bioinformatics 20 (1). , 2019
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932884
Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium
Oey, Harald, Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium. PLOS Pathogens 15 (1). , 2019
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919005
GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data
Schulz, Tizian, GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data. BMC Genomics 19 (Suppl. 5). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919006
Computing the family-free DCJ similarity
Rubert, Diego, Computing the family-free DCJ similarity. BMC Bioinformatics 19 (Suppl. 6). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918481
Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework
Luhmann, Nina, Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework. IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (6). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932754
Position and Content Paradigms in Genome Rearrangements. The Wild and Crazy World of Permutations in Genomics
Bhatia, Sangeeta, Position and Content Paradigms in Genome Rearrangements. The Wild and Crazy World of Permutations in Genomics. BULLETIN OF MATHEMATICAL BIOLOGY 80 (12). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919346
Do we treat our patients or rather periodontal microbes with adjunctive antibiotics in periodontal therapy? A 16S rDNA microbial community analysis
Hagenfeld, Daniel, Do we treat our patients or rather periodontal microbes with adjunctive antibiotics in periodontal therapy? A 16S rDNA microbial community analysis. PLOS ONE 13 (4). , 2018
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2018 | Bielefelder E-Dissertation | PUB-ID: 2918485
Pan-genome Search and Storage
Holley, Guillaume, Pan-genome Search and Storage. (). Bielefeld, 2018
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2018 | Bielefelder E-Dissertation | PUB-ID: 2919356
On Distance and Sorting of the Double Cut-and-Join and the Inversion-*indel* Model
Willing, Eyla, On Distance and Sorting of the Double Cut-and-Join and the Inversion-*indel* Model. (). Bielefeld, 2018
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2018 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2930445
Identifying Maximal Perfect Haplotype Blocks
Cunha, Luís, Identifying Maximal Perfect Haplotype Blocks. Proceedings of BSB 2018 11228 (). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930268
Dynamic Alignment-Free and Reference-Free Read Compression
Holley, Guillaume, Dynamic Alignment-Free and Reference-Free Read Compression. JOURNAL OF COMPUTATIONAL BIOLOGY 25 (7). , 2018
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2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913921
Pan-genome Storage and Analysis Techniques
Zekic, Tina, Pan-genome Storage and Analysis Techniques. Comparative Genomics. Methods and Protocols 1704 (). New York, 2018
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2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913922
Family-Free Genome Comparison
Dörr, Daniel, Family-Free Genome Comparison. Comparative Genomics: Methods and Protocols 1704 (). New York, 2018
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2018 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2913920
Comparative Genomics: Methods and Protocols
Setubal, João C, Comparative Genomics: Methods and Protocols. 1704 (). New York, 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919012
Flexible metagenome analysis using the MGX framework
Jaenicke, Sebastian, Flexible metagenome analysis using the MGX framework. Microbiome 6 (). , 2018
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2017 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2908574
The SCJ Small Parsimony Problem for Weighted Gene Adjacencies
Luhmann, Nina, The SCJ Small Parsimony Problem for Weighted Gene Adjacencies. IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (). , 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912492
Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes
Luhmann, Nina, Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes. Microbial Genomics 3 (9). , 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
Bioinformatics for NGS-based metagenomics and the application to biogas research
Jünemann, Sebastian, Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology 261 (SI). , 2017
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913015
Algorithms for Computing the Family-Free Genomic Similarity under DCJ
Rubert, Diego, Algorithms for Computing the Family-Free Genomic Similarity under DCJ. Comparative Genomics. RECOMB-CG 2017 10562 (). Cham, 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909057
Approximating the DCJ distance of balanced genomes in linear time
Rubert, Diego, Approximating the DCJ distance of balanced genomes in linear time. Algorithms for Molecular Biology 12 (). , 2017
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2017 | Bielefelder E-Dissertation | PUB-ID: 2909213
Phylogenetic assembly of paleogenomes integrating ancient DNA data
Luhmann, Nina, Phylogenetic assembly of paleogenomes integrating ancient DNA data. (). Bielefeld, 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916552
Genomic Distance with High Indel Costs
da Silva, Poly H., Genomic Distance with High Indel Costs. IEEE/ACM Transactions on Computational Biology and Bioinformatics 14 (3). , 2017
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2909409
Fast and Simple Jumbled Indexing for Binary Run-Length Encoded Strings
Cunha, Luis, Fast and Simple Jumbled Indexing for Binary Run-Length Encoded Strings. Proceedings of CPM 2017 78 (). , 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911814
The gene family-free median of three
Dörr, Daniel, The gene family-free median of three. Algorithms for Molecular Biology 12 (). , 2017
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2017 | Preprint | Veröffentlicht | PUB-ID: 2908521
Faster Jumbled Indexing for Binary Run-Length Encoded Strings
Cunha, Luís, Faster Jumbled Indexing for Binary Run-Length Encoded Strings. arXiv: 1702.01280 (). , 2017
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2907587
Dynamic Alignment-Free and Reference-Free Read Compression
Holley, Guillaume, Dynamic Alignment-Free and Reference-Free Read Compression. Proceedings of RECOMB 2017 10229 (). , 2017
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2017 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2913924
Comparative Methods for Reconstructing Ancient Genome Organization
Anselmetti, Yoan, Comparative Methods for Reconstructing Ancient Genome Organization. Comparative Genomics (). , 2017
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2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913016
Finding Teams in Graphs and its Application to Spatial Gene Cluster Discovery
Schulz, Tizian, Finding Teams in Graphs and its Application to Spatial Gene Cluster Discovery. Proceedings of RECOMB-CG 2017 1704 (). Berlin, 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909967
New Genome Similarity Measures based on Conserved Gene Adjacencies
Dörr, Daniel, New Genome Similarity Measures based on Conserved Gene Adjacencies. Journal of Computational Biology 24 (6). , 2017
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901477
Robust normalization protocols for multiplexed fluorescence bioimage analysis
Ahmed Raza, Shan E, Robust normalization protocols for multiplexed fluorescence bioimage analysis. BioData Mining 9 (1). , 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905930
Finding approximate gene clusters with GECKO 3
Winter, Sascha, Finding approximate gene clusters with GECKO 3. Nucleic Acids Research 44 (20). , 2016
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2903708
A Linear Time Approximation Algorithm for the DCJ Distance for Genomes with Bounded Number of Duplicates
Rubert, Diego, A Linear Time Approximation Algorithm for the DCJ Distance for Genomes with Bounded Number of Duplicates. Algorithms in Bioinformatics. WABI 2016 9838 (). Cham, 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900129
Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage
Holley, Guillaume, Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage. Algorithms for Molecular Biology 11 (). , 2016
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2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Assembling the microbial dark matter
Bremges, Andreas, Assembling the microbial dark matter. (). Bielefeld, 2016
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2016 | Bielefelder E-Dissertation | PUB-ID: 2902049
Gene family-free genome comparison
Dörr, Daniel, Gene family-free genome comparison. (). Bielefeld, 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900943
Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations
Langenkämper, Daniel, Comparison of Acceleration Techniques for Selected Low-Level Bioinformatics Operations. Frontiers in Genetics 7 (). , 2016
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2900111
New Genome Similarity Measures based on Conserved Gene Adjacencies
Kowada, Luis Antonio B., New Genome Similarity Measures based on Conserved Gene Adjacencies. Research in Computational Molecular Biology. RECOMB 2016 9649 (). , 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900421
Identification of the CIMP-like subtype and aberrant methylation of members of the chromosomal segregation and spindle assembly pathways in esophageal adenocarcinoma
Krause, Lutz, Identification of the CIMP-like subtype and aberrant methylation of members of the chromosomal segregation and spindle assembly pathways in esophageal adenocarcinoma. Carcinogenesis 37 (4). , 2016
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2016 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2901740
The SCJ small parsimony problem for weighted gene adjacencies
Luhmann, Nina, The SCJ small parsimony problem for weighted gene adjacencies. Proceedings 12th International Symposium, ISBRA 2016 9683 (). , 2016
PUB | DOI | Download (ext.) | arXiv
 
2016 | Konferenzband | Veröffentlicht | PUB-ID: 2912258
Genfamilienfreier Genomvergleich
Hölldobler, Steffen, Genfamilienfreier Genomvergleich. D-16 (). Bonn, 2016
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2911748
Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses
Krahn, Thomas, Complete Genome Sequence ofAcinetobacter baumanniiCIP 70.10, a Susceptible Reference Strain for Comparative Genome Analyses. Genome Announcements 3 (4). , 2015
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2677844
Sorting linear genomes with rearrangements and indels
Dias Vieira Braga, Marília, Sorting linear genomes with rearrangements and indels. IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (3). , 2015
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2726366
On the family-free DCJ distance and similarity
Viduani Martinez, Fábio Henrique, On the family-free DCJ distance and similarity. Algorithms for Molecular Biology 10 (). , 2015
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2715682
Maui-VIA: a user-friendly software for visual identification, alignment, correction, and quantification of gas chromatography–mass spectrometry data
Henning, Peter, Maui-VIA: a user-friendly software for visual identification, alignment, correction, and quantification of gas chromatography–mass spectrometry data. Frontiers in Bioengineering and Biotechnology 2 (84). , 2015
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2766708
Next-generation-sequencing of recurrent childhood high hyperdiploid acute lymphoblastic leukemia reveals mutations typically associated with high risk patients
Chen, Cai, Next-generation-sequencing of recurrent childhood high hyperdiploid acute lymphoblastic leukemia reveals mutations typically associated with high risk patients. Leukemia research (). , 2015
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764612
Repeat- and error-aware comparison of deletions
Wittler, Roland, Repeat- and error-aware comparison of deletions. Bioinformatics 31 (18). , 2015
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2015 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2757497
Bloom Filter Trie - a data structure for pan-genome storage
Holley, Guillaume, Bloom Filter Trie - a data structure for pan-genome storage. Proceedings of WABI 2015 9289 (). , 2015
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2015 | Bielefelder E-Dissertation | PUB-ID: 2786037
Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains
Hilker, Rolf, Development of a read mapping analysis software and computational pan genome analysis of 20 Pseudomonas aeruginosa strains. (). Bielefeld, 2015
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2015 | Konferenzband | Veröffentlicht | PUB-ID: 2780229
Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Bioinformatics
Meidanis, Joao, Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Bioinformatics. 16 (Supplement 14). , 2015
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2015 | Konferenzband | Veröffentlicht | PUB-ID: 2780232
Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Genomics
Meidanis, Joao, Proceedings of the 13th Annual Research in Computational Molecular Biology (RECOMB) Satellite Workshop on Comparative Genomics: Genomics. 16 (Supplement 10). , 2015
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2684241
On the family-free DCJ distance
Viduani Martinez, Fábio Henrique, On the family-free DCJ distance. Algorithms in Bioinformatics. WABI 2014 8701 (). Berlin ; Heidelberg, 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687033
Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings
Dörr, Daniel, Identifying Gene Clusters by Discovering Common Intervals in Indeterminate Strings. BMC Genomics 15 (Suppl. 6: Proc. of RECOMB-CG 2014). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685362
Orthology Detection Combining Clustering and Synteny for Very Large Datasets
Lechner, Marcus, Orthology Detection Combining Clustering and Synteny for Very Large Datasets. PLoS ONE 9 (8). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689773
GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers
Jünemann, Sebastian, GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers. PLOS ONE 9 (9). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2723541
Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomes
Ander, Christina, Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomes. (). Bielefeld, 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
ReadXplorer - Visualization and Analysis of Mapped Sequences
Hilker, Rolf, ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics 30 (16). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts
Schwientek, Patrick, Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology 190 (). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing
Jakobi, Tobias, Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing. Journal of Biotechnology 190 (). , 2014
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2014 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2690122
Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework
Luhmann, Nina, Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework. Proc. of BSB 2014 8826 (). , 2014
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2014 | Bielefelder E-Dissertation | PUB-ID: 2677466
Computational methods for high-throughput metabolomics
Hoffmann, Nils, Computational methods for high-throughput metabolomics. (). Bielefeld, 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691246
Genomic Inverse PCR for Exploration of Ligated Breakpoints (GIPFEL), a New Method to Detect Translocations in Leukemia
Fueller, Elisa, Genomic Inverse PCR for Exploration of Ligated Breakpoints (GIPFEL), a New Method to Detect Translocations in Leukemia. PloS one 9 (8). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Lexikoneintrag | Veröffentlicht | PUB-ID: 2693552
Suffix Tree Construction
Stoye, Jens, Suffix Tree Construction. Encyclopedia of Algorithms (). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693409
Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle
Fredrich, Eugenie, Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle. BIOspektrum 20 (5). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry
Hoffmann, Nils, BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry. Bioinformatics 30 (7). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691732
Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria
Klippel, Barbara, Carbohydrate-active enzymes identified by metagenomic analysis of deep-sea sediment bacteria. Extremophiles 18 (5). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2691279
A New Workflow for Whole-Genome Sequencing of Single Human Cells
Binder, Vera, A New Workflow for Whole-Genome Sequencing of Single Human Cells. Human mutation (). , 2014
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma
Henrich, Birgit, Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE 9 (3). , 2014
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2673418
POPSEQ Anchoring and ordering contig assemblies from next generation sequencing data by population sequencing
Mascher, Martin, POPSEQ Anchoring and ordering contig assemblies from next generation sequencing data by population sequencing. (). Bielefeld, 2014
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2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2611641
Restricted DCJ-Indel Model Revisited
Dias Vieira Braga, Marília, Restricted DCJ-Indel Model Revisited. Advances in Bioinformatics and Computational Biology. BSB 2013 8213 (). Cham, 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611630
On the Inversion-Indel Distance
Willing, Eyla, On the Inversion-Indel Distance. BMC Bioinformatics 14 (Suppl 15: Proc. of RECOMB-CG 2013). , 2013
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611648
The Potential of Family-Free Genome Comparison
Dias Vieira Braga, Marília, The Potential of Family-Free Genome Comparison. Models and Algorithms for Genome Evolution 19 (). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575011
metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences
Ander, Christina, metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences. BMC Bioinformatics 14 (Suppl 5: Proc. of RECOMB-Seq 2013). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2555342
Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites
He, Pengfei, Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites. Journal of biotechnology 164 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641228
Corrigendum: Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Corrigendum: Updating benchtop sequencing performance comparison. Nature biotechnology 31 (12). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2492825
In vitro-induced response patterns of antileukemic T cells: characterization by spectratyping and immunophenotyping
Reuther, Susanne, In vitro-induced response patterns of antileukemic T cells: characterization by spectratyping and immunophenotyping. Clinical and Experimental Medicine 13 (1). , 2013
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2013 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2611643
The Genesis of the DCJ Formula
Bergeron, Anne, The Genesis of the DCJ Formula. Models and Algorithms for Genome Evolution 19 (). , 2013
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2013 | Bielefelder E-Dissertation | PUB-ID: 2604883
Comparative genomics on gene and single nucleotide level
Blom, Jochen, Comparative genomics on gene and single nucleotide level. (). Bielefeld, 2013
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2013 | Bielefelder E-Dissertation | PUB-ID: 2594322
VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications
Janowski, Sebastian Jan, VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications. (). Bielefeld, 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2575361
Next-generation-sequencing-spectratyping reveals public T-cell receptor repertoires in pediatric very severe aplastic anemia and identifies a beta chain CDR3 sequence associated with hepatitis-induced pathogenesis
Krell, Pina, Next-generation-sequencing-spectratyping reveals public T-cell receptor repertoires in pediatric very severe aplastic anemia and identifies a beta chain CDR3 sequence associated with hepatitis-induced pathogenesis. Haematologica 98 (9). , 2013
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2013 | Lexikoneintrag | Veröffentlicht | PUB-ID: 2577323
Taxonomic classification of metagenomic shotgun sequences with CARMA3
Gerlach, Wolfgang, Taxonomic classification of metagenomic shotgun sequences with CARMA3. Encyclopedia of Metagenomics (). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2625914
Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis
Bergmann, Thorsten, Categorization of two-photon microscopy images of human cartilage into states of osteoarthritis. Osteoarthritis And Cartilage 21 (8). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2566922
Updating benchtop sequencing performance comparison
Jünemann, Sebastian, Updating benchtop sequencing performance comparison. Nature Biotechnology 31 (4). , 2013
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2013 | Konferenzband | Veröffentlicht | PUB-ID: 2616537
Algorithms in Bioinformatics
Darling, Aaron, Algorithms in Bioinformatics. 8126 (). Heidelberg, 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2611633
Statistics for approximate gene clusters
Jahn, Katharina, Statistics for approximate gene clusters. BMC Bioinformatics 14 (Suppl 15: Proc. of RECOMB-CG 2013). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548236
Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media
Schwientek, Patrick, Comparative RNA-sequencing of the acarbose producer Actinoplanes sp. SE50/110 cultivated in different growth media. Journal of Biotechnology 167 (2). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2548286
Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344
Luque-Almagro, Víctor M, Draft whole genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Environmental Microbiology 15 (1). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2552092
Unraveling overlapping deletions by agglomerative clustering
Wittler, Roland, Unraveling overlapping deletions by agglomerative clustering. BMC Genomics 14 (Suppl 1). , 2013
PUB | Dateien verfügbar | DOI | WoS | PubMed | Europe PMC
 
2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529309
Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing
Bolzan de Campos, Samanta, Changes in Root Bacterial Communities Associated to Two Different Development Stages of Canola (*Brassica napus* L. var oleifera) Evaluated through Next-Generation Sequencing. Microbial Ecology 65 (3). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2659331
Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes
Feijão, Pedro, Extending the Algebraic Formalism for Genome Rearrangements to Include Linear Chromosomes. IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (4). , 2013
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2529202
MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets
Zakrzewski, Martha, MetaSAMS - A novel software platform for taxonomic classification, functional annotation and comparative analysis of metagenome datasets. Journal of Biotechnology 167 (2). , 2013
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560353
Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions
Dörr, Daniel, Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms for Molecular Biology 7 (1). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2512642
Gene family assignment-free comparative genomics
Dörr, Daniel, Gene family assignment-free comparative genomics. BMC Bioinformatics 13 (Suppl 19: Proc. of RECOMB-CG 2012). , 2012
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2012 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2498160
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient
Schröder, Jasmin, Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. BMC Genomics 13 (1). , 2012
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