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769 Publikationen

2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2770216
Kleinbölting N, Huep G, Appelhagen I, Viehöver P, Li Y, Weisshaar B (2015)
The structural features of thousands of T-DNA insertion sites are consistent with a double-strand break repair based insertion mechanism.
Molecular Plant 8(11): 1651-1664.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2771555
Müller C, Birmes FS, Rückert C, Kalinowski J, Fetzner S (2015)
Rhodococcus erythropolis BG43 genes mediating Pseudomonas aeruginosa quinolone signal degradation and virulence factor attenuation.
Applied and Environmental Microbiology 81(22): 7720-7729.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764512
Rückert C, Birmes FS, Müller C, Niewerth H, Winkler A, Fetzner S, Kalinowski J (2015)
Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules.
Journal of biotechnology 211: 99-100.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2756434
Oelschlägel M, Rückert C, Kalinowski J, Schmidt G, Schlömann M, Tischler D (2015)
Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid.
International journal of systematic and evolutionary microbiology 65(Part 9): 3008-3015.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689771
Unthan S, Baumgart M, Radek A, Herbst M, Siebert D, Brühl N, Bartsch A, Bott M, Wiechert W, Marin K, Hans S, Krämer R, Seibold G, Frunzke J, Kalinowski J, Rückert C, Wendisch VF, Noack S (2015)
Chassis organism from Corynebacterium glutamicum – a top-down approach to identify and delete irrelevant gene clusters.
Biotechnology Journal 10(2): 290-301.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Pühler A, Kalinowski J, Rückert C (2015)
Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid.
Journal of Biotechnology 194: 81-83.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877
Rückert C, Albersmeier A, Busche T, Jaenicke S, Winkler A, Friðjónsson ÓH, Hreggviðsson GÓ, Lambert C, Badcock D, Bernaerts K, Anne J, Economou A, Kalinowski J (2015)
Complete genome sequence of Streptomyces lividans TK24.
Journal of Biotechnology 199: 21-22.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719679
Vinardell JM, Acosta-Jurado S, Göttfert M, Zehner S, Becker A, Baena-Ropero I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, McIntosh M, Margaret I, Pérez-Montaño F, Schneiker-Bekel S, Serrania J, Szczepanowski R, Buendia-Claveria AM, Lloret J, Bonilla I, Pühler A, Ruiz-Sainz JE, Weidner S (2015)
The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean.
Molecular Plant-Microbe Interactions 28(7): 811-824.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185
Schafhauser T, Wibberg D, Rückert C, Winkler A, Flor L, van Pée K-H, Fewer DP, Sivonen K, Jahn L, Ludwig-Müller J, Caradec T, Jacques P, Huijbers MME, van Berkel WJH, Weber T, Wohlleben W, Kalinowski J (2015)
Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential.
Journal of Biotechnology 211: 101-102.
PUB | DOI | WoS | PubMed | Europe PMC
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732031
Appelhagen I, Nordholt N, Seidel T, Spelt K, Koes R, Quattrochio F, Sagasser M, Weisshaar B (2015)
Transparent Testa 13 is a tonoplast P3A-ATPase required for vacuolar deposition of proanthocyanidins in Arabidopsis thaliana seeds.
The Plant Journal 82(5): 840-849.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699085 OA
Holtgräwe D, Rosleff Sörensen T, Viehöver P, Schneider J, Schulz B, Borchardt D, Kraft T, Himmelbauer H, Weisshaar B (2014)
Reliable In Silico Identification of Sequence Polymorphisms and Their Application for Extending the Genetic Map of Sugar Beet (Beta vulgaris).
PLoS ONE 9(10): e110113: e110113.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2696778 OA
Stracke R, Holtgräwe D, Schneider J, Pucker B, Rosleff Sörensen T, Weisshaar B (2014)
Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet ( Beta vulgaris ).
BMC Plant Biology 14(1): 249: 249.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2658490
Dziewit L, Czarnecki J, Wibberg D, Radlinska M, Mrozek P, Szymczak M, Schlüter A, Pühler A, Bartosik D (2014)
Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids.
BMC Genomics 15(1): 124: 124.
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674171
Dubos C, Kelemen Z, Sebastian A, Bülow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014)
Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes.
BMC genomics 15(1): 317: 317.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700166 OA
Huep G, Kleinbölting N, Weisshaar B (2014)
An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana.
Plant Methods 10(1): 28: 28.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699107
Rebets Y, Tokovenko B, Lushchyk I, Rückert C, Zaburannyi N, Bechthold A, Kalinowski J, Luzhetskyy A (2014)
Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae.
BMC genomics 15(1): 885: 885.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360
Tippelt A, Möllmann S, Albersmeier A, Jaenicke S, Rückert C, Tauch A (2014)
Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849.
Genome announcements 2(4).
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2682811
Lübke N-C, Wolf T, Braun R, Rückert C, Kalinowski J (2014)
Vom Schärfesensor zur mikrobiellen Brennstoffzelle.
BIOspektrum 20(4): 468-469.
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2679399
Neshat A, Mentz A, Rückert C, Kalinowski J (2014)
Transcriptome sequencing revealed the transcriptional organization at ribosome-mediated attenuation sites in Corynebacterium glutamicum and identified a novel attenuator involved in aromatic amino acid biosynthesis.
Journal of biotechnology 190: 55-63.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Bielefelder E-Dissertation | PUB-ID: 2770185 OA
Nolla Ardevol V (2014)
Anaerobic digestion of the microalga Spirulina at alkaline conditions (pH~10; 2.0 M Na+): biogas production and metagenome analysis.
Bielefeld: Bielefeld University.
PUB | PDF
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker R, Stadermann KB, Doppmeier D, Kalinowski J, Stoye J, Straube J, Winnebald J, Goesmann A (2014)
ReadXplorer - Visualization and Analysis of Mapped Sequences.
Bioinformatics 30(16): 2247-2254.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678005
Heitkam T, Holtgräwe D, Dohm JC, Minoche AE, Himmelbauer H, Weisshaar B, Schmidt T (2014)
Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades.
The Plant Journal 79(3): 385-397.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A (2014)
Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts.
Journal of Biotechnology 190: 85-95.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2647992
Flinspach K, Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin.
Genome announcements 2(1): e01146-13.
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2653196
Wilson MC, Mori T, Rückert C, Uria AR, Helf MJ, Takada K, Gernert C, Steffens UAE, Heycke N, Schmitt S, Rinke C, Helfrich EJN, Brachmann AO, Gurgui C, Wakimoto T, Kracht M, Crüsemann M, Hentschel U, Abe I, Matsunaga S, Kalinowski J, Takeyama H, Piel J (2014)
An environmental bacterial taxon with a large and distinct metabolic repertoire.
Nature 506(7486): 58-62.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643981
Bolger ME, Weisshaar B, Scholz U, Stein N, Usadel B, Mayer KFX (2014)
Plant genome sequencing — applications for crop improvement.
Current Opinion in Biotechnology 26(4): 31-37.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705365
Tippelt A, Albersmeier A, Brinkrolf K, Rückert C, Fernández-Natal I, Soriano F, Tauch A (2014)
Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient.
Genome announcements 2(6).
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Jakobi T, Brinkrolf K, Tauch A, Noll T, Stoye J, Pühler A, Goesmann A (2014)
Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing.
Journal of Biotechnology 190: 64-75.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693289
Al-Dilaimi A, Albersmeier A, Kalinowski J, Rückert C (2014)
Complete Genome Sequence of Corynebacterium vitaeruminis DSM 20294T, isolated from the cow rumen as a vitamin B producer.
Journal of Biotechnology 189: 70-71.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693296
Walter F, Albersmeier A, Kalinowski J, Rückert C (2014)
Complete Genome Sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese.
Journal of Biotechnology 189: 76-77.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517
Hackmann C, Korneli C, Kutyniok M, Köster T, Wiedenlübbert M, Müller C, Staiger D (2014)
Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity.
Plant, Cell & Environment 37(3): 696-706.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2701280
Noll T, Pühler A, Weisshaar B, Wendisch VF (2014)
The Genomics Revolution and its Impact on Future Biotechnology.
Journal of Biotechnology 190: 1-1: 1.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2687120
Albersmeier A, Bomholt C, Glaub A, Rückert C, Soriano F, Fernández-Natal I, Tauch A (2014)
Draft Genome Sequence of the Multidrug-Resistant Clinical Isolate Dermabacter hominis 1368.
Genome announcements 2(4).
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643941
Hoffmann N, Wilhelm M, Doebbe A, Niehaus K, Stoye J (2014)
BiPACE 2D – Graph-based multiple alignment for comprehensive two-dimensional gas chromatography–mass spectrometry.
Bioinformatics 30(7): 988-995.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643946
Dohm JC, Minoche AE, Holtgräwe D, Capella-Gutiérrez S, Zakrzewski F, Tafer H, Rupp O, Rosleff Sörensen T, Stracke R, Reinhardt R, Goesmann A, Kraft T, Schulz B, Stadler PF, Schmidt T, Gabaldón T, Lehrach H, Weisshaar B, Himmelbauer H (2014)
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris).
Nature 505(7484): 546-549.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2647986
Rückert C, Kalinowski J, Heide L, Apel AK (2014)
Draft Genome Sequence of Streptomyces roseochromogenes subsp. oscitans DS 12.976, Producer of the Aminocoumarin Antibiotic Clorobiocin.
Genome announcements 2(1): e01147-13.
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2651944
Tielen P, Wibberg D, Blom J, Rosin N, Meyer A-K, Bunk B, Schobert M, Tüpker R, Schatschneider S, Rückert C, Albersmeier A, Goesmann A, Vorhölter F-J, Jahn D, Pühler A (2014)
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection.
Genome announcements 2(1).
PUB | DOI | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2676806
Busche T, Pfeifer-Sancar K, Rückert C, Kalinowski J (2014)
Identifizierung von Promotoren in Corynebacterium glutamicum.
BIOspektrum 20(3): 284-287.
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693409
Fredrich E, Ander C, Stoye J, Brune I, Tauch A (2014)
Metatranskriptomik der Mikrobiota aus der menschlichen Achselhöhle.
BIOspektrum 20(5): 294-296.
PUB | DOI
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689749
Milse J, Petri K, Rückert C, Kalinowski J (2014)
Transcriptional response of Corynebacterium glutamicum ATCC 13032 to hydrogen peroxide stress and characterization of the OxyR regulon.
Journal of Biotechnology 190: 40-54.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689802
Fechter I, Hausmann L, Zyprian E, Daum M, Holtgräwe D, Weisshaar B, Töpfer R (2014)
QTL analysis of flowering time and ripening traits suggests an impact of a genomic region on linkage group 1 in Vitis.
Theoretical and Applied Genetics 127(9): 1857-1872.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2664976
Rückert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkämper A, Pühler A, Biener R, Schwartz D, Kalinowski J (2014)
Complete Genome Sequence of the Actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin.
Journal of biotechnology 178: 41-42.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662843
Myronovskyi M, Tokovenko B, Brötz E, Rückert C, Kalinowski J, Luzhetskyy A (2014)
Genome rearrangements of Streptomyces albus J1074 lead to the carotenoid gene cluster activation.
Applied microbiology and biotechnology 98(2): 795-806.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2684495
Dally N, Xiao K, Holtgräwe D, Jung C (2014)
The B2 flowering time locus of beet encodes a zinc finger transcription factor.
Proceedings of the National Academy of Sciences 111(28): 10365-10370.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685861
Torres Tejerizo G, Pistorio M, Althabegoiti MJ, Cervantes L, Wibberg D, Schlüter A, Pühler A, Lagares A, Romero D, Brom S (2014)
Rhizobial plasmid pLPU83a is able to switch between different transfer machineries depending on its genomic background.
FEMS Microbiology Ecology 88(3): 565-578.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2679186
Appelhagen I, Thiedig K, Nordholt N, Schmidt N, Huep G, Sagasser M, Weisshaar B (2014)
Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection.
Planta 240(5): 955-970.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2675608
Wibberg D, Torres Tejerizo G, Florencia Del Papa M, Martini C, Pühler A, Lagares A, Schlüter A, Pistorio M (2014)
Genome sequence of the acid-tolerant strain Rhizobium sp LPU83.
Journal of Biotechnology 176: 40-41.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2668850
Zakrzewski F, Schubert V, Viehöver P, Minoche AE, Dohm JC, Himmelbauer H, Weisshaar B, Schmidt T (2014)
The CHH motif in sugar beet satellite DNA: a modulator for cytosine methylation.
The Plant Journal 78(6): 937-950.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693535
Stegmann E, Albersmeier A, Spohn M, Gert H, Weber T, Wohlleben W, Kalinowski J, Rückert C (2014)
Complete Genome Sequence of the Actinobacterium Amycolatopsis japonica MG417-CF17T (=DSM 44213T) producing (S,S)-N,N'-ethylenediaminedisuccinic acid.
Journal of biotechnology 189: 46-47.
PUB | DOI | WoS | PubMed | Europe PMC
 
2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705374
Möllmann S, Albersmeier A, Rückert C, Tauch A (2014)
Complete Genome Sequence of Corynebacterium imitans DSM 44264, Isolated from a Five-Month-Old Boy with Suspected Pharyngeal Diphtheria.
Genome announcements 2(6).
PUB | DOI | PubMed | Europe PMC
 

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