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769 Publikationen

2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2900055
Plassmeier, J., Li, Y., Rückert, C., & Sinskey, A. J. (2016). Metabolic Engineering Corynebacterium glutamicum to Produce Triacylglycerols. Metab Eng, 33, 86-97. doi:10.1016/j.ymben.2015.11.002
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2787257
Schwichtenberg, K., Wenke, T., Zakrzewski, F., Seibt, K., Minoche, A., Dohm, J., Weisshaar, B., et al. (2016). Diversification, Evolution and Methylation of Short Interspersed Nuclear Element families in sugar beet and related Amaranthaceae species. The Plant Journal, 85(2), 229-244. doi:10.1111/tpj.13103
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753051
Rückert, C., Albersmeier, A., Winkler, A., & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA. Genome announcements, 3(3). doi:10.1128/genomeA.00571-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765190
Rückert, C., Kriete, M., Jaenicke, S., Winkler, A., & Tauch, A. (2015). Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare. Genome announcements, 3(4). doi:10.1128/genomeA.00783-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775257
Rückert, C., Eimer, J., Winkler, A., & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium mustelae DSM 45274, Isolated from Various Tissues of a Male Ferret with Lethal Sepsis. Genome announcements, 3(5). doi:10.1128/genomeA.01012-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2761035
Arnold, M., Wibberg, D., Blom, J., Schatschneider, S., Winkler, A., Kutter, Y., Rückert, C., et al. (2015). Draft Genome Sequence of Pseudomonas aeruginosa Strain WS136, a Highly Cytotoxic ExoS-Positive Wound Isolate Recovered from Pyoderma Gangrenosum. Genome announcements, 3(4). doi:10.1128/genomeA.00680-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765197
Rückert, C., Kriete, M., Jaenicke, S., Winkler, A., & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium testudinoris DSM 44614, Recovered from Necrotic Lesions in the Mouth of a Tortoise. Genome announcements, 3(4). doi:10.1128/genomeA.00784-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2753057
Rückert, C., Albersmeier, A., Winkler, A., & Tauch, A. (2015). Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis. Genome announcements, 3(3). doi:10.1128/genomeA.00572-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2769395
Rückert, C., Eimer, J., Winkler, A., & Tauch, A. (2015). Complete Genome Sequence of the Type Strain Corynebacterium epidermidicanis DSM 45586, Isolated from the Skin of a Dog Suffering from Pruritus. Genome announcements, 3(4). doi:10.1128/genomeA.00959-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2728042
Merten, M., Brinkrolf, K., Albersmeier, A., Kutter, Y., Rückert, C., & Tauch, A. (2015). Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen. Genome Announcements, 3(2). doi:10.1128/genomeA.00183-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2782605
Rupp, O., Brinkrolf, K., Buerth, C., Kunigo, M., Schneider, J., Jaenicke, S., Goesmann, A., et al. (2015). The structure of the Cyberlindnera jadinii genome and its relation to Candida utilis analyzed by the occurrence of single nucleotide polymorphisms. Journal of Biotechnology, 211, 20-30. doi:10.1016/j.jbiotec.2015.06.423
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2758144
Wibberg, D., Rupp, O., Jelonek, L., Kröber, M., Verwaaijen, B., Blom, J., Winkler, A., et al. (2015). Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system. Journal of Biotechnology, 203, 19-21. doi:10.1016/j.jbiotec.2015.03.005
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2768627
Eikmeyer, F. G., Heinl, S., Marx, H., Pühler, A., Grabherr, R., & Schlüter, A. (2015). Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing. PLoS ONE, 10(7), e0134149. doi:10.1371/journal.pone.0134149
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2775617
Stadermann, K. B., Weisshaar, B., & Holtgräwe, D. (2015). SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome. BMC Bioinformatics, 16, 295. doi:10.1186/s12859-015-0726-6
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2721868
Persicke, M., Albersmeier, A., Bednarz, H., Niehaus, K., Kalinowski, J., & Rückert, C. (2015). Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147T. Standards in Genomic Sciences, 10, 5. doi:10.1186/1944-3277-10-5
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2717880
Schierenbeck, L., Ries, D., Rogge, K., Grewe, S., Weisshaar, B., & Kruse, O. (2015). Fast forward genetics to identify mutations causing a high light tolerant phenotype in Chlamydomonas reinhardtii by whole-genome-sequencing. BMC Genomics, 16, 57. doi:10.1186/s12864-015-1232-y
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2722382
Stolze, Y., Zakrzewski, M., Maus, I., Eikmeyer, F. G., Jaenicke, S., Rottmann, N., Siebner, C., et al. (2015). Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions. Biotechnology for Biofuels, 8, 14. doi:10.1186/s13068-014-0193-8
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764063
Minoche, A. E., Dohm, J. C., Schneider, J., Holtgräwe, D., Viehöver, P., Montfort, M., Rosleff Sörensen, T., et al. (2015). Exploiting single-molecule transcript sequencing for eukaryotic gene prediction. Genome Biology, 16, 184. doi:10.1186/s13059-015-0729-7
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2771746
Rückert, C., Leipoldt, F., Zeyhle, P., Fenical, W., Jensen, P. R., Kalinowski, J., Heide, L., et al. (2015). Complete Genome Sequence of Streptomyces sp. CNQ-509, a Prolific Producer of Meroterpenoid Chemistry. Journal of Biotechnology, 216, 140-141. doi:10.1016/j.jbiotec.2015.08.009
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2770216
Kleinbölting, N., Huep, G., Appelhagen, I., Viehöver, P., Li, Y., & Weisshaar, B. (2015). The structural features of thousands of T-DNA insertion sites are consistent with a double-strand break repair based insertion mechanism. Molecular Plant, 8(11), 1651-1664. doi:10.1016/j.molp.2015.08.011
PUB | DOI | WoS | PubMed | Europe PMC | GenBank
 
2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2771555
Müller, C., Birmes, F. S., Rückert, C., Kalinowski, J., & Fetzner, S. (2015). Rhodococcus erythropolis BG43 genes mediating Pseudomonas aeruginosa quinolone signal degradation and virulence factor attenuation. Applied and Environmental Microbiology, 81(22), 7720-7729. doi:10.1128/AEM.02145-15
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764512
Rückert, C., Birmes, F. S., Müller, C., Niewerth, H., Winkler, A., Fetzner, S., & Kalinowski, J. (2015). Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules. Journal of biotechnology, 211, 99-100. doi:10.1016/j.jbiotec.2015.07.014
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2756434
Oelschlägel, M., Rückert, C., Kalinowski, J., Schmidt, G., Schlömann, M., & Tischler, D. (2015). Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid. International journal of systematic and evolutionary microbiology, 65(Part 9), 3008-3015. doi:10.1099/ijs.0.000371
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2735160
Kurosawa, K., Plassmeier, J., Kalinowski, J., Rückert, C., & Sinskey, A. J. (2015). Engineering L-arabinose metabolism in triacylglycerol-producing Rhodococcus opacus for lignocellulosic fuel production. Metabolic engineering, 30, 89-95. doi:10.1016/j.ymben.2015.04.006
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689771
Unthan, S., Baumgart, M., Radek, A., Herbst, M., Siebert, D., Brühl, N., Bartsch, A., et al. (2015). Chassis organism from Corynebacterium glutamicum – a top-down approach to identify and delete irrelevant gene clusters. Biotechnology Journal, 10(2), 290-301. doi:10.1002/biot.201400041
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2709783
Ortseifen, V., Winkler, A., Albersmeier, A., Wendler, S., Pühler, A., Kalinowski, J., & Rückert, C. (2015). Complete Genome Sequence of the Actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid. Journal of Biotechnology, 194, 81-83. doi:10.1016/j.jbiotec.2014.11.036
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719877
Rückert, C., Albersmeier, A., Busche, T., Jaenicke, S., Winkler, A., Friðjónsson, Ó. H., Hreggviðsson, G. Ó., et al. (2015). Complete genome sequence of Streptomyces lividans TK24. Journal of Biotechnology, 199, 21-22. doi:10.1016/j.jbiotec.2015.02.004
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2719679
Vinardell, J. M., Acosta-Jurado, S., Göttfert, M., Zehner, S., Becker, A., Baena-Ropero, I., Blom, J., et al. (2015). The Sinorhizobium fredii HH103 genome: a comparative analysis with S. fredii strains differing in their symbiotic behaviour with soybean. Molecular Plant-Microbe Interactions, 28(7), 811-824. doi:10.1094/mpmi-12-14-0397-fi
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2764185
Schafhauser, T., Wibberg, D., Rückert, C., Winkler, A., Flor, L., van Pée, K. - H., Fewer, D. P., et al. (2015). Draft genome sequence of Talaromyces islandicus ("Penicillium islandicum") WF-38-12, a neglected mold with significant biotechnological potential. Journal of Biotechnology, 211, 101-102. doi:10.1016/j.jbiotec.2015.07.004
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2732031
Appelhagen, I., Nordholt, N., Seidel, T., Spelt, K., Koes, R., Quattrochio, F., Sagasser, M., et al. (2015). Transparent Testa 13 is a tonoplast P3A-ATPase required for vacuolar deposition of proanthocyanidins in Arabidopsis thaliana seeds. The Plant Journal, 82(5), 840-849. doi:10.1111/tpj.12854
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2696778
Stracke, R., Holtgräwe, D., Schneider, J., Pucker, B., Rosleff Sörensen, T., & Weisshaar, B. (2014). Genome-wide identification and characterisation of R2R3-MYB genes in sugar beet ( Beta vulgaris ). BMC Plant Biology, 14(1), 249. doi:10.1186/s12870-014-0249-8
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699085
Holtgräwe, D., Rosleff Sörensen, T., Viehöver, P., Schneider, J., Schulz, B., Borchardt, D., Kraft, T., et al. (2014). Reliable In Silico Identification of Sequence Polymorphisms and Their Application for Extending the Genetic Map of Sugar Beet (Beta vulgaris). PLoS ONE, 9(10), e110113. doi:10.1371/journal.pone.0110113
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2700166
Huep, G., Kleinbölting, N., & Weisshaar, B. (2014). An easy-to-use primer design tool to address paralogous loci and T-DNA insertion sites in the genome of Arabidopsis thaliana. Plant Methods, 10, 28. doi:10.1186/1746-4811-10-28
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2699107
Rebets, Y., Tokovenko, B., Lushchyk, I., Rückert, C., Zaburannyi, N., Bechthold, A., Kalinowski, J., et al. (2014). Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae. BMC genomics, 15(1), 885. doi:10.1186/1471-2164-15-885
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2692360
Tippelt, A., Möllmann, S., Albersmeier, A., Jaenicke, S., Rückert, C., & Tauch, A. (2014). Mycolic Acid Biosynthesis Genes in the Genome Sequence of Corynebacterium atypicum DSM 44849. Genome announcements, 2(4). doi:10.1128/genomeA.00845-14
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2682811
Lübke, N. - C., Wolf, T., Braun, R., Rückert, C., & Kalinowski, J. (2014). Vom Schärfesensor zur mikrobiellen Brennstoffzelle. BIOspektrum, 20(4), 468-469. doi:10.1007/s12268-014-0465-7
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2679399
Neshat, A., Mentz, A., Rückert, C., & Kalinowski, J. (2014). Transcriptome sequencing revealed the transcriptional organization at ribosome-mediated attenuation sites in Corynebacterium glutamicum and identified a novel attenuator involved in aromatic amino acid biosynthesis. Journal of biotechnology, 190, 55-63. doi:10.1016/j.jbiotec.2014.05.033
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2014 | Bielefelder E-Dissertation | PUB-ID: 2770185
Nolla Ardevol, V. (2014). Anaerobic digestion of the microalga Spirulina at alkaline conditions (pH~10; 2.0 M Na+): biogas production and metagenome analysis. Bielefeld: Bielefeld University.
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2678005
Heitkam, T., Holtgräwe, D., Dohm, J. C., Minoche, A. E., Himmelbauer, H., Weisshaar, B., & Schmidt, T. (2014). Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades. The Plant Journal, 79(3), 385-397. doi:10.1111/tpj.12565
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674387
Hilker, R., Stadermann, K. B., Doppmeier, D., Kalinowski, J., Stoye, J., Straube, J., Winnebald, J., et al. (2014). ReadXplorer - Visualization and Analysis of Mapped Sequences. Bioinformatics, 30(16), 2247-2254. doi:10.1093/bioinformatics/btu205
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665038
Schwientek, P., Neshat, A., Kalinowski, J., Klein, A., Rückert, C., Schneiker-Bekel, S., Wendler, S., et al. (2014). Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts. Journal of Biotechnology, 190, 85-95. doi:10.1016/j.jbiotec.2014.03.013
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2647992
Flinspach, K., Rückert, C., Kalinowski, J., Heide, L., & Apel, A. K. (2014). Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin. Genome announcements, 2(1), e01146-13. doi:10.1128/genomeA.01146-13
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2653196
Wilson, M. C., Mori, T., Rückert, C., Uria, A. R., Helf, M. J., Takada, K., Gernert, C., et al. (2014). An environmental bacterial taxon with a large and distinct metabolic repertoire. Nature, 506(7486), 58-62. doi:10.1038/nature12959
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2705365
Tippelt, A., Albersmeier, A., Brinkrolf, K., Rückert, C., Fernández-Natal, I., Soriano, F., & Tauch, A. (2014). Complete Genome Sequence of Corynebacterium ureicelerivorans DSM 45051, a Lipophilic and Urea-Splitting Isolate from the Blood Culture of a Septicemia Patient. Genome announcements, 2(6). doi:10.1128/genomeA.01211-14
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2643981
Bolger, M. E., Weisshaar, B., Scholz, U., Stein, N., Usadel, B., & Mayer, K. F. X. (2014). Plant genome sequencing — applications for crop improvement. Current Opinion in Biotechnology, 26(4), 31-37. doi:10.1016/j.copbio.2013.08.019
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2685988
Jakobi, T., Brinkrolf, K., Tauch, A., Noll, T., Stoye, J., Pühler, A., & Goesmann, A. (2014). Discovery of transcription start sites in the Chinese hamster genome by next-generation RNA sequencing. Journal of Biotechnology, 190, 64-75. doi:10.1016/j.jbiotec.2014.07.437
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693289
Al-Dilaimi, A., Albersmeier, A., Kalinowski, J., & Rückert, C. (2014). Complete Genome Sequence of Corynebacterium vitaeruminis DSM 20294T, isolated from the cow rumen as a vitamin B producer. Journal of Biotechnology, 189, 70-71. doi:10.1016/j.jbiotec.2014.08.036
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2693296
Walter, F., Albersmeier, A., Kalinowski, J., & Rückert, C. (2014). Complete Genome Sequence of Corynebacterium casei LMG S-19264T (=DSM 44701T), isolated from a smear-ripened cheese. Journal of Biotechnology, 189, 76-77. doi:10.1016/j.jbiotec.2014.08.038
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2674171
Dubos, C., Kelemen, Z., Sebastian, A., Bülow, L., Huep, G., Xu, W., Grain, D., et al. (2014). Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC genomics, 15(1), 317. doi:10.1186/1471-2164-15-317
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2631517
Hackmann, C., Korneli, C., Kutyniok, M., Köster, T., Wiedenlübbert, M., Müller, C., & Staiger, D. (2014). Salicylic acid-dependent and -independent impact of an RNA-binding protein on plant immunity. Plant, Cell & Environment, 37(3), 696-706. doi:10.1111/pce.12188
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