Please note that PUB no longer supports Internet Explorer versions 8 or 9 (or earlier).

We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.

485 Publikationen

2019 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2936900
Wittler, Roland. 2019. “Alignment- and reference-free phylogenomics with colored de Bruijn graphs”. In Proceedings of WABI 2019, ed. Katharina Huber and Dan Gusfield. Vol. 143. LIPIcs. Dagstuhl, Germany: Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik.
PUB | DOI | Download (ext.)
 
2019 | Preprint | PUB-ID: 2935604
Wittler, Roland. 2019. “Alignment- and reference-free phylogenomics with colored de-Bruijn graphs”. arXiv:1905.04165.
PUB | PDF
 
2019 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2932883
Dörr, Daniel, and Stoye, Jens. 2019. “A Perspective on Comparative and Functional Genomics”. In Bioinformatics and Phylogenetics, ed. Tandy Warnow, 29:361-372. Computational Biology. Cham: Springer .
PUB | DOI
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2932884
Oey, Harald, Zakrzewski, Martha, Gravermann, Kerstin, Young, Neil D., Korhonen, Pasi K., Gobert, Geoffrey N., Nawaratna, Sujeevi, et al. 2019. “Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium”. PLOS Pathogens 15 (1): e1007513.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919005
Schulz, Tizian, Stoye, Jens, and Dörr, Daniel. 2018. “GraphTeams. A method for discovering spatial gene clusters in Hi-C sequencing data”. BMC Genomics 19 (Suppl. 5): 308.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919006
Rubert, Diego, Hoshino, Edna A., Dias Vieira Braga, Marília, Stoye, Jens, and Martinez, Fábio Henrique Viduani. 2018. “Computing the family-free DCJ similarity”. BMC Bioinformatics 19 (Suppl. 6): 152.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918481
Luhmann, Nina, Chauve, Cedric, Stoye, Jens, and Wittler, Roland. 2018. “Scaffolding of Ancient Contigs and Ancestral Reconstruction in a Phylogenetic Framework”. IEEE/ACM Transactions on Computational Biology and Bioinformatics 15 (6): 2094-2100.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913921
Zekic, Tina, Holley, Guillaume, and Stoye, Jens. 2018. “Pan-genome Storage and Analysis Techniques”. In Comparative Genomics. Methods and Protocols, ed. João C. Setubal, Peter Stadler, and Jens Stoye, 1704:29-53. Methods in Molecular Biology. New York: Springer Verlag.
PUB
 
2018 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2913922
Dörr, Daniel, Feijão, Pedro, and Stoye, Jens. 2018. “Family-Free Genome Comparison”. In Comparative Genomics: Methods and Protocols, ed. João C. Setubal, Peter Stadler, and Jens Stoye, 1704:331-342. Methods in Molecular Biology. New York: Springer Verlag.
PUB
 
2018 | Herausgeber*in Sammelwerk | Veröffentlicht | PUB-ID: 2913920
Setubal, João C, Stadler, Peter, and Stoye, Jens, eds. 2018. Comparative Genomics: Methods and Protocols. Vol. 1704. Methods in Molecular Biology. New York: Springer Verlag.
PUB
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2919012
Jaenicke, Sebastian, Albaum, Stefan, Blumenkamp, Patrick, Linke, Burkhard, Stoye, Jens, and Goesmann, Alexander. 2018. “Flexible metagenome analysis using the MGX framework”. Microbiome 6: 76.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | E-Veröff. vor dem Druck | PUB-ID: 2908574
Luhmann, Nina, Lafond, Manuel, Thévenin, Annelyse, Ouangraoua, Aida, Wittler, Roland, and Chauve, Cedric. 2017. “The SCJ Small Parsimony Problem for Weighted Gene Adjacencies”. IEEE/ACM Transactions on Computational Biology and Bioinformatics 14.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2912492
Luhmann, Nina, Dörr, Daniel, and Chauve, Cedric. 2017. “Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes”. Microbial Genomics 3 (9).
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909057
Rubert, Diego, Feijão, Pedro, Dias Vieira Braga, Marília, Stoye, Jens, and Martinez, Fábio Henrique Viduani. 2017. “Approximating the DCJ distance of balanced genomes in linear time”. Algorithms for Molecular Biology 12: 3.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2909409
Cunha, Luis, Dantas, Simone, Gagie, Travis, Wittler, Roland, Kowada, Luis, and Stoye, Jens. 2017. “Fast and Simple Jumbled Indexing for Binary Run-Length Encoded Strings”. In Proceedings of CPM 2017, 78:19:1-19:9. LIPIcs.
PUB | DOI
 
2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2907587
Holley, Guillaume, Wittler, Roland, Stoye, Jens, and Hach, Faraz. 2017. “Dynamic Alignment-Free and Reference-Free Read Compression”. In Proceedings of RECOMB 2017, 10229:50-65. Lecture Notes in Bioinformatics.
PUB | DOI
 
2017 | Sammelwerksbeitrag | Im Druck | PUB-ID: 2913924
Anselmetti, Yoan, Luhmann, Nina, Bérard, Sèverine, Tannier, Eric, and Chauve, Cedric. In Press. “Comparative Methods for Reconstructing Ancient Genome Organization”. In Comparative Genomics, ed. João C. Setubal, Peter Stadler, and Jens Stoye. Methods in Molecular Biology. Springer Verlag.
PUB
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909967
Dörr, Daniel, Kowada, Luis Antonio B., Soares de Araujo, Francisco Eloi, Deshpande, Shachi, Dantas, Simone, Moret, Bernard M. E., and Stoye, Jens. 2017. “New Genome Similarity Measures based on Conserved Gene Adjacencies”. Journal of Computational Biology 24 (6): 616-634.
PUB | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2901413
Gorzolka, Karin, Kölling, Jan, Nattkemper, Tim Wilhelm, and Niehaus, Karsten. 2016. “Spatio-Temporal Metabolite Profiling of the Barley Germination Process by MALDI MS Imaging”. PLOS ONE 11 (3): 0150208.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2905930
Winter, Sascha, Jahn, Katharina, Wehner, Stefanie, Kuchenbecker, Leon, Marz, Manja, Stoye, Jens, and Böcker, Sebastian. 2016. “Finding approximate gene clusters with GECKO 3”. Nucleic Acids Research 44 (20): 9600-9610.
PUB | DOI | WoS | PubMed | Europe PMC
 

Filter und Suchbegriffe

department=441317

Suche

Publikationen filtern

Darstellung / Sortierung

Zitationsstil: chicago

Export / Einbettung