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40 Publikationen

2017 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2913690 OA
Zhu, L., Ester, M.: Bayesian Collective Markov Random Fields for Subcellular Localization Prediction of Human Proteins. Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics - ACM-BCB '17. ACM Press (2017).
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2015 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2765914
Zhu, L., Malatras, A., Thorley, M., Aghoghogbe, I., Mer, A., Duguez, S., Butler-Browne, G., Voit, T., Duddy, W.: CellWhere: graphical display of interaction networks organized on subcellular localizations. Nucleic Acids Research. 43, W571-W575 (2015).
PUB | DOI | WoS | PubMed | Europe PMC
 
2013 | Bielefelder E-Dissertation | PUB-ID: 2594322 OA
Janowski, S.J.: VANESA - A bioinformatics software application for the modeling, visualization, analysis, and simulation of biological networks in systems biology applications. Bielefeld University, Bielefeld (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560811
Lee, H.-M., Dietz, K.-J., Hofestädt, R.: Computational construction of specialized biological networks. Journal of Bioinformatics and Computational Biology. 11, : 1340003 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2560817
Sommer, B., Kormeier, B., Demenkov, P.S., Arrigo, P., Hippe, K., Ates, Ö., Kochetov, A.V., Ivanisenko, V.A., Kolchanov, N.A., Hofestädt, R.: Subcellular localization charts: a new visual methodology for the semi-automatic localization of protein-related data sets. Journal of Bioinformatics and Computational Biology. 11, : 1340005 (2013).
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2374720
Hippe, K., Kormeier, B., Janowski, S.J., Töpel, T., Hofestädt, R.: DAWIS-M.D. 2.0 - A Data Warehouse Information System for Metabolic Data. Proceedings of the 7th International Symposium on Integrative Bioinformatics. (2011).
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2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2376427
Hofestädt, R.: Petri Nets and the Simulation of Metabolic Networks. In: Wingender, E. (ed.) Biological Petri Nets. Studies in health technology and informatics. 162, 1. Edition. p. 1-2. IOS Press, Amsterdam (2011).
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2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2376491
Hofestädt, R., Thelen, S.: Quantitative Modeling of Biochemical Networks. In: Wingender, E. (ed.) Biological Petri Nets. Studies in health technology and informatics. 162, 1. Edition. p. 3-16. IOS Press, Amsterdam (2011).
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2011 | Sammelwerksbeitrag | Veröffentlicht | PUB-ID: 2376523
Chen, M., Hofestädt, R.: Quantitative Petri Net Model of Gene Regulated Metabolic Networks in the Cell. In: Wingender, E. (ed.) Biological Petri Nets. Studies in health technology and informatics. 162, 1. Edition. p. 38-55. IOS Press, Amsterdam (2011).
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2290112
Chen, M., Hu, M., Hofestädt, R.: A Systematic Petri Net Approach for Multiple-Scale Modeling and Simulation of Biochemical Processes. Applied Biochemistry and Biotechnology. 164, 338-352 (2011).
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2326407
Chen, M., Hariharaputran, S., Hofestädt, R., Kormeier, B., Spangardt, S.: Petri net models for the semi-automatic construction of large scale biological networks. Natural Computing. 10, 1077-1097 (2011).
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2408590
Huang, D., Huang, Y., Bai, Y., Chen, D., Hofestädt, R., Klukas, C., Chen, M.: MyBioNet: interactively visualize, edit and merge biological networks on the Web. Bioinformatics. 27, 3321-3322 (2011).
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2011 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2458209
Hofestädt, R.: Fundamental Features of Metabolic Computing. In: Batyrshin, I. and Sidorov, G. (eds.) Advances in Soft Computing: 10th Mexican International Conference on Artificial Intelligence, MICAI 2011, Puebla, Mexico, November 26 - December 4, 2011, Proceedings, Part II. Lecture Notes in Computer Science. 7095, p. 143-152. Springer, Berlin, Heidelberg (2011).
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2011 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2408602
Kormeier, B., Hippe, K., Hofestädt, R.: Data Warehouses in Bioinformatics: Integration of Molecular Biological Data. it Information Technology. 53, 241-249 (2011).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2408607
Lee, H.-M., Dietz, K.-J., Hofestädt, R.: Prediction of thioredoxin and glutaredoxin target proteins by identifying reversibly oxidized cysteinyl residues. Journal of Integrative Bioinformatics (Special Issue). 7, 23-34 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2406168
Kormeier, B., Hippe, K., Töpel, T., Hofestädt, R.: CardioVINEdb: a data warehouse approach for integration of life science data in cardiovascular diseases. Journal of Integrative Bioinformatics. 7, : 142 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1945096
Kormeier, B., Hippe, K., Arrigo, P., Töpel, T., Janowski, S.J., Hofestädt, R.: Reconstruction of biological networks based on life science data integration. Journal of Integrative Bioinformatics. 7, 3-8 (2010).
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2010 | Konferenzband | Veröffentlicht | PUB-ID: 2376605
Hofestädt, R., Kolchanov, N. eds: Computational Systems Biology: German/Russian Network of Computational Systems Biology. Medizinische Informatik und Bioinformatik. (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2409400
Töpel, T., Scheible, D., Trefz, F., Hofestädt, R.: RAMEDIS: a comprehensive information system for variations and corresponding phenotypes of rare metabolic diseases. Human Mutation. 31, E1081-E1088 (2010).
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2010 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2374757
Sommer, B., Tiys, E.S., Kormeier, B., Hippe, K., Janowski, S.J., Ivanisenko, T.V., Bragin, A.O., Arrigo, P., Demenkov, P.S., Kochetov, A.V., Ivanisenko, V.A., Kolchanov, N.A., Hofestädt, R.: Visualization and Analysis of a Cardio Vascular Disease-and MUPP1-related Biological Network combining Text Mining and Data Warehouse Approaches. Journal of Integrative Bioinformatics. 7, 148 (2010).
PUB | DOI | PubMed | Europe PMC
 

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