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50 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
CAMISIM: simulating metagenomes and microbial communities
Fritz, Adrian, CAMISIM: simulating metagenomes and microbial communities. Microbiome 7 (). , 2019
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
Stolze, Yvonne, Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants. Microbial Biotechnology 11 (4). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts
Celis, Juan Sebastián, Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts. GigaScience 7 (7). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
AMBER: Assessment of Metagenome BinnERs
Meyer, Fernando, AMBER: Assessment of Metagenome BinnERs. GigaScience (). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
Common ELIXIR Service for Researcher Authentication and Authorisation
Linden, Mikael, Common ELIXIR Service for Researcher Authentication and Authorisation. F1000Research 7 (). , 2018
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
Analyzing large scale genomic data on the cloud with Sparkhit
Huang, Liren, Analyzing large scale genomic data on the cloud with Sparkhit. Bioinformatics 34 (9). , 2018
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2018 | Bielefelder Masterarbeit | PUB-ID: 2919932
Concept, design and initial implementation of the de.NBI Cloud Portal
Wiens, Maximilian, Concept, design and initial implementation of the de.NBI Cloud Portal. (). Bielefeld, 2018
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2018 | Bielefelder E-Dissertation | PUB-ID: 2918990
Metadata-driven computational (meta)genomics. A practical machine learning approach
Rumming, Madis, Metadata-driven computational (meta)genomics. A practical machine learning approach. (). Bielefeld, 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors
Maus, Irena, Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors. Biotechnology for Biofuels 11 (). , 2018
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea
Fleming, E. J., Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea. Applied and Environmental Microbiology 84 (9). , 2018
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153
Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism
Yu, Jia, Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism. Journal of Biotechnology 257 (). , 2017
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
Bioinformatics for NGS-based metagenomics and the application to biogas research
Jünemann, Sebastian, Bioinformatics for NGS-based metagenomics and the application to biogas research. Journal of Biotechnology 261 (SI). , 2017
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2017 | Datenpublikation | PUB-ID: 2914921
Sparkhit evaluation data set
Huang, Liren, Sparkhit evaluation data set. (). , 2017
PUB | Dateien verfügbar | DOI
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software
Sczyrba, Alexander, Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software. Nature Methods 14 (11). , 2017
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants
Stolze, Yvonne, Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants. Biotechnology for Biofuels 9 (). , 2016
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2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
Assembling the microbial dark matter
Bremges, Andreas, Assembling the microbial dark matter. (). Bielefeld, 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data
Lux, Markus, acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data. BMC Bioinformatics 17 (). , 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type
Heyer, R., Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type. Biotechnology for Biofuels 9 (1). , 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903489
Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment
Maus, Irena, Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment. Journal of Biotechnology 232 (). , 2016
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2903302
Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing
Wibberg, Daniel, Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing. Journal of Biotechnology 232 (). , 2016
PUB | DOI | WoS | PubMed | Europe PMC
 

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