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53 Publikationen

2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2689051
Ghylin, T.W., Garcia, S.L., Moya, F., Oyserman, B.O., Schwientek, P., Forest, K.T., Mutschler, J., Dwulit-Smith, J., Chan, L.-K., Martinez-Garcia, M., Sczyrba, A., Stepanauskas, R., Grossart, H.-P., Woyke, T., Warnecke, F., Malmstrom, R., Bertilsson, S., McMahon, K.D.: Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. The ISME Journal. 8, 2503-2516 (2014).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2672695
Swan, B.K., Chaffin, M.D., Martinez-Garcia, M., Morrison, H.G., Field, E.K., Poulton, N.J., Masland, E.D.P., Harris, C.C., Sczyrba, A., Chain, P.S.G., Koren, S., Woyke, T., Stepanauskas, R.: Genomic and metabolic diversity of marine group I thaumarchaeota in the mesopelagic of two subtropical gyres. PloS one. 9, 95380 (2014).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2665333
Henrich, B., Rumming, M., Sczyrba, A., Velleuer, E., Dietrich, R., Gerlach, W., Gombert, M., Rahn, S., Stoye, J., Borkhardt, A., Fischer, U.: Mycoplasma salivarium as a Dominant Coloniser of Fanconi Anaemia Associated Oral Carcinoma. PLoS ONE. 9, e92297 (2014).
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2014 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2662055
Wibberg, D., Luque-Almagro, V.M., Igeño, M.I., Bremges, A., Roldán, M.D., Merchán, F., Sáez, L.P., Guijo, M.I., Manso, M.I., Macías, D., Cabello, P., Becerra, G., Ibáñez, M.I., Carmona, M.I., Escribano, M.P., Castillo, F., Sczyrba, A., Moreno-Vivián, C., Blasco, R., Pühler, A., Schlüter, A.: Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344. Journal of biotechnology. 175, 67-68 (2014).
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2013 | Konferenzbeitrag | Veröffentlicht | PUB-ID: 2623500
Gisbrecht, A., Hammer, B., Mokbel, B., Sczyrba, A.: Nonlinear dimensionality reduction for cluster identification in metagenomic samples. In: Banissi, E. (ed.) 17th International Conference on Information Visualisation IV 2013. p. 174-179. (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613567
Rinke, C., Schwientek, P., Sczyrba, A., Ivanova, N.N., Anderson, I.J., Cheng, J.-F., Darling, A., Malfatti, S., Swan, B.K., Gies, E.A., Dodsworth, J.A., Hedlund, B.P., Tsiamis, G., Sievert, S.M., Liu, W.-T., Eisen, J.A., Hallam, S.J., Kyrpides, N.C., Stepanauskas, R., Rubin, E.M., Hugenholtz, P., Woyke, T.: Insights into the phylogeny and coding potential of microbial dark matter. Nature. 499, 431-437 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563424
Campbell, J.H., O'Donoghue, P., Campbell, A.G., Schwientek, P., Sczyrba, A., Woyke, T., Söll, D., Podar, M.: UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110, 5540-5545 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2638234
Zaremba-Niedzwiedzka, K., Viklund, J., Zhao, W., Ast, J., Sczyrba, A., Woyke, T., McMahon, K., Bertilsson, S., Stepanauskas, R., Andersson, S.G.: Single-cell genomics reveal low recombination frequencies in freshwater bacteria of the SAR11 clade. Genome biology. 14, R130 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2641352
Kamke, J., Sczyrba, A., Ivanova, N., Schwientek, P., Rinke, C., Mavromatis, K., Woyke, T., Hentschel, U.: Single-cell genomics reveals complex carbohydrate degradation patterns in poribacterial symbionts of marine sponges. The ISME journal. 7, 2287-2300 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2563543
Campbell, A.G., Campbell, J.H., Schwientek, P., Woyke, T., Sczyrba, A., Allman, S., Beall, C.J., Griffen, A., Leys, E., Podar, M.: Multiple Single-Cell Genomes Provide Insight into Functions of Uncultured Deltaproteobacteria in the Human Oral Cavity. PLoS ONE. 8, : e59361 (2013).
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2013 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2613623
Swan, B.K., Tupper, B., Sczyrba, A., Lauro, F.M., Martinez-Garcia, M., González, J.M., Luo, H., Wright, J.J., Landry, Z.C., Hanson, N.W., Thompson, B.P., Poulton, N.J., Schwientek, P., Acinas, S.G., Giovannoni, S.J., Moran, M.A., Hallam, S.J., Cavicchioli, R., Woyke, T., Stepanauskas, R.: Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean. Proceedings of the National Academy of Sciences of the United States of America. 110, 11463-11468 (2013).
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2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1784020
Lamprecht, A.-L., Margaria, T., Steffen, B., Sczyrba, A., Hartmeier, S., Giegerich, R.: GeneFisher-P: variations of GeneFisher as processes in Bio-jETI. BMC Bioinformatics. 9, S13 (2008).
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2008 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 1588303
Sczyrba, A., Konermann, S., Giegerich, R.: Two interactive bioinformatics courses at the bielefeld university bioinformatics server. BRIEFINGS IN BIOINFORMATICS. 9, 243-249 (2008).
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