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52 Publikationen

2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2934798
H. Pankoke, et al., “F5Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota.”, FEMS microbiology letters, 2019.
PUB | DOI | PubMed | Europe PMC
 
2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2935923
J. Nelkner, et al., “Effect of Long-Term Farming Practices on Agricultural Soil Microbiome Members Represented by Metagenomically Assembled Genomes (MAGs) and Their Predicted Plant-Beneficial Genes”, Genes, vol. 10, 2019, : 424.
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2019 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2933767
A. Fritz, et al., “CAMISIM: simulating metagenomes and microbial communities”, Microbiome, vol. 7, 2019, : 17.
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2018 | Bielefelder E-Dissertation | PUB-ID: 2918990
M. Rumming, Metadata-driven computational (meta)genomics. A practical machine learning approach, Bielefeld: Universität Bielefeld, 2018.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2916929
Y. Stolze, et al., “Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants”, Microbial Biotechnology, vol. 11, 2018, pp. 667-679.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920777
J.S. Celis, et al., “Binning Enables Efficient Host Genome Reconstruction in Cnidarian Holobionts”, GigaScience, vol. 7, 2018, : giy075.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920723
F. Meyer, et al., “AMBER: Assessment of Metagenome BinnERs”, GigaScience, 2018, : giy069.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2930593
M. Linden, et al., “Common ELIXIR Service for Researcher Authentication and Authorisation”, F1000Research, vol. 7, 2018, : 1199.
PUB | DOI | Download (ext.) | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2915890
L. Huang, J. Krüger, and A. Sczyrba, “Analyzing large scale genomic data on the cloud with Sparkhit”, Bioinformatics, vol. 34, 2018, pp. 1457-1465.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Bielefelder Masterarbeit | PUB-ID: 2919932
M. Wiens, Concept, design and initial implementation of the de.NBI Cloud Portal, Bielefeld: Universität Bielefeld, 2018.
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2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2920750
I. Maus, et al., “Characterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors”, Biotechnology for Biofuels, vol. 11, 2018, : 167.
PUB | DOI | WoS | PubMed | Europe PMC
 
2018 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2918275
E.J. Fleming, et al., “Insights into the fundamental physiology of the uncultured Fe-oxidizing bacterium Leptothrix ochracea”, Applied and Environmental Microbiology, vol. 84, 2018, : e02239-17.
PUB | DOI | WoS | PubMed | Europe PMC
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2909153
J. Yu, et al., “Rapid protein alignment in the cloud: HAMOND combines fast DIAMOND alignments with Hadoop parallelism”, Journal of Biotechnology, vol. 257, 2017, pp. 58-60.
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2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2913556
S. Jünemann, et al., “Bioinformatics for NGS-based metagenomics and the application to biogas research”, Journal of Biotechnology, vol. 261, 2017, pp. 10-23.
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2017 | Datenpublikation | PUB-ID: 2914921
L. Huang, J. Krüger, and A. Sczyrba, Sparkhit evaluation data set. Bielefeld University, 2017. doi:10.4119/unibi/2914921.
PUB | Dateien verfügbar | DOI
 
2017 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2914367
A. Sczyrba, et al., “Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software”, Nature Methods, vol. 14, 2017, pp. 1063-1071.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904815
Y. Stolze, et al., “Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants”, Biotechnology for Biofuels, vol. 9, 2016, : 156.
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2016 | Bielefelder E-Dissertation | PUB-ID: 2906743
A. Bremges, Assembling the microbial dark matter, Bielefeld: Universität Bielefeld, 2016.
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2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2907633
M. Lux, et al., “acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data”, BMC Bioinformatics, vol. 17, 2016, : 543.
PUB | PDF | DOI | WoS | PubMed | Europe PMC
 
2016 | Zeitschriftenaufsatz | Veröffentlicht | PUB-ID: 2904836
R. Heyer, et al., “Proteotyping of biogas plant microbiomes separates biogas plants according to process temperature and reactor type”, Biotechnology for Biofuels, vol. 9, 2016, : 155.
PUB | DOI | WoS | PubMed | Europe PMC
 

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